-
1
-
-
33846887420
-
Phylogenetic distribution of translational GTPases in bacteria
-
Margus T, Remm M, Tenson T (2007) Phylogenetic distribution of translational GTPases in bacteria. BMC Genomics 8:15.
-
(2007)
BMC Genomics
, vol.8
, pp. 15
-
-
Margus, T.1
Remm, M.2
Tenson, T.3
-
2
-
-
14844340954
-
Initiation of protein synthesis in bacteria
-
Laursen BS, Sørensen HP, Mortensen KK, Sperling-Petersen HU (2005) Initiation of protein synthesis in bacteria. Microbiol Mol Biol Rev 69(1):101-123.
-
(2005)
Microbiol Mol Biol Rev
, vol.69
, Issue.1
, pp. 101-123
-
-
Laursen, B.S.1
Sørensen, H.P.2
Mortensen, K.K.3
Sperling-Petersen, H.U.4
-
3
-
-
0018577166
-
Specific interaction of initiation factor IF2 of E. Coli with formylmethionyl-tRNA f Met
-
Petersen HU, Røll T, Grunberg-Manago M, Clark BF (1979) Specific interaction of initiation factor IF2 of E. Coli with formylmethionyl-tRNA f Met. Biochem Biophys Res Commun 91(3):1068-1074.
-
(1979)
Biochem Biophys Res Commun
, vol.91
, Issue.3
, pp. 1068-1074
-
-
Petersen, H.U.1
Røll, T.2
Grunberg-Manago, M.3
Clark, B.F.4
-
4
-
-
0034723404
-
The C-terminal subdomain (IF2 C-2) contains the entire fMettRNA binding site of initiation factor IF2
-
Spurio R, et al. (2000) The C-terminal subdomain (IF2 C-2) contains the entire fMettRNA binding site of initiation factor IF2. J Biol Chem 275(4):2447-2454.
-
(2000)
J Biol Chem
, vol.275
, Issue.4
, pp. 2447-2454
-
-
Spurio, R.1
-
5
-
-
0029913289
-
Late events in translation initiation. Adjustment of fMet-tRNA in the ribosomal P-site
-
La Teana A, Pon CL, Gualerzi CO (1996) Late events in translation initiation. Adjustment of fMet-tRNA in the ribosomal P-site. J Mol Biol 256(4):667-675.
-
(1996)
J Mol Biol
, vol.256
, Issue.4
, pp. 667-675
-
-
La Teana, A.1
Pon, C.L.2
Gualerzi, C.O.3
-
6
-
-
52149112910
-
Structure of the 30S translation initiation complex
-
Simonetti A, et al. (2008) Structure of the 30S translation initiation complex. Nature 455(7211):416-420.
-
(2008)
Nature
, vol.455
, Issue.7211
, pp. 416-420
-
-
Simonetti, A.1
-
7
-
-
79960917084
-
The Cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli
-
Julián P, et al. (2011) The Cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli. PLoS Biol 9(7):e1001095.
-
(2011)
PLoS Biol
, vol.9
, Issue.7
-
-
Julián, P.1
-
8
-
-
0015927308
-
Effect of ribosomal protein L12 upon initiation factor IF-2 activities
-
Kay A, Sander G, Grunberg-Manago M (1973) Effect of ribosomal protein L12 upon initiation factor IF-2 activities. Biochem Biophys Res Commun 51(4):979-986.
-
(1973)
Biochem Biophys Res Commun
, vol.51
, Issue.4
, pp. 979-986
-
-
Kay, A.1
Sander, G.2
Grunberg-Manago, M.3
-
9
-
-
28544446738
-
Conformational transition of initiation factor 2 from the GTP-to GDP-bound state visualized on the ribosome
-
Myasnikov AG, et al. (2005) Conformational transition of initiation factor 2 from the GTP-to GDP-bound state visualized on the ribosome. Nat Struct Mol Biol 12(12): 1145-1149.
-
(2005)
Nat Struct Mol Biol
, vol.12
, Issue.12
, pp. 1145-1149
-
-
Myasnikov, A.G.1
-
10
-
-
20444365142
-
The cryo-EM structure of a translation initiation complex from Escherichia coli
-
Allen GS, Zavialov A, Gursky R, Ehrenberg M, Frank J (2005) The cryo-EM structure of a translation initiation complex from Escherichia coli. Cell 121(5):703-712.
-
(2005)
Cell
, vol.121
, Issue.5
, pp. 703-712
-
-
Allen, G.S.1
Zavialov, A.2
Gursky, R.3
Ehrenberg, M.4
Frank, J.5
-
11
-
-
55749099506
-
Irreversible chemical steps control intersubunit dynamics during translation
-
Marshall RA, Dorywalska M, Puglisi JD (2008) Irreversible chemical steps control intersubunit dynamics during translation. Proc Natl Acad Sci USA 105(40):15364-15369.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.40
, pp. 15364-15369
-
-
Marshall, R.A.1
Dorywalska, M.2
Puglisi, J.D.3
-
12
-
-
0038182530
-
A conserved structural motif at the N terminus of bacterial translation initiation factor IF2
-
Laursen BS, Mortensen KK, Sperling-Petersen HU, Hoffman DW (2003) A conserved structural motif at the N terminus of bacterial translation initiation factor IF2. J Biol Chem 278(18):16320-16328.
-
(2003)
J Biol Chem
, vol.278
, Issue.18
, pp. 16320-16328
-
-
Laursen, B.S.1
Mortensen, K.K.2
Sperling-Petersen, H.U.3
Hoffman, D.W.4
-
13
-
-
84859508471
-
Structural dynamics of bacterial translation initiation factor IF2
-
Wienk H, et al. (2012) Structural dynamics of bacterial translation initiation factor IF2. J Biol Chem 287(14):10922-10932.
-
(2012)
J Biol Chem
, vol.287
, Issue.14
, pp. 10922-10932
-
-
Wienk, H.1
-
14
-
-
24344440731
-
Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
-
Wienk H, et al. (2005) Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2. Protein Sci 14(9):2461-2468.
-
(2005)
Protein Sci
, vol.14
, Issue.9
, pp. 2461-2468
-
-
Wienk, H.1
-
15
-
-
0034678924
-
Structure of the fMet-tRNA(fMet)-binding domain of B. Stearothermophilus initiation factor IF2
-
Meunier S, et al. (2000) Structure of the fMet-tRNA(fMet)-binding domain of B. stearothermophilus initiation factor IF2. EMBO J 19(8):1918-1926.
-
(2000)
EMBO J
, vol.19
, Issue.8
, pp. 1918-1926
-
-
Meunier, S.1
-
16
-
-
43949083746
-
Solution structure of C-terminal Escherichia coli translation initiation factor IF2 by small-angle X-ray scattering
-
Rasmussen LC, et al. (2008) Solution structure of C-terminal Escherichia coli translation initiation factor IF2 by small-angle X-ray scattering. Biochemistry 47(20):5590-5598.
-
(2008)
Biochemistry
, vol.47
, Issue.20
, pp. 5590-5598
-
-
Rasmussen, L.C.1
-
17
-
-
84884635539
-
Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor
-
Simonetti A, et al. (2013) Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor. Proc Natl Acad Sci USA 110:15656-15661.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 15656-15661
-
-
Simonetti, A.1
-
18
-
-
84878313058
-
Structure of the protein core of translation initiation factor IF2 in apo, GTP and GDP forms
-
Simonetti AMS, et al. (2013) Structure of the protein core of translation initiation factor IF2 in apo, GTP and GDP forms. Acta Crystallogr D Biol Crystallogr 69(6):925-33.
-
(2013)
Acta Crystallogr D Biol Crystallogr
, vol.69
, Issue.6
, pp. 925-933
-
-
Simonetti, A.M.S.1
-
19
-
-
0033039626
-
Characterization of the domains of E. Coli initiation factor IF2 responsible for recognition of the ribosome
-
Moreno JM, Drskjøtersen L, Kristensen JE, Mortensen KK, Sperling-Petersen HU (1999) Characterization of the domains of E. Coli initiation factor IF2 responsible for recognition of the ribosome. FEBS Lett 455(1-2):130-134.
-
(1999)
FEBS Lett
, vol.455
, Issue.1-2
, pp. 130-134
-
-
Moreno, J.M.1
Drskjøtersen, L.2
Kristensen, J.E.3
Mortensen, K.K.4
Sperling-Petersen, H.U.5
-
20
-
-
74649084177
-
Ribosomal interaction of Bacillus stearothermophilus translation initiation factor IF2: Characterization of the active sites
-
Caserta E, et al. (2010) Ribosomal interaction of Bacillus stearothermophilus translation initiation factor IF2: Characterization of the active sites. J Mol Biol 396(1):118-129.
-
(2010)
J Mol Biol
, vol.396
, Issue.1
, pp. 118-129
-
-
Caserta, E.1
-
21
-
-
70350588648
-
The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA
-
Schmeing TM, et al. (2009) The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA. Science 326(5953):688-694.
-
(2009)
Science
, vol.326
, Issue.5953
, pp. 688-694
-
-
Schmeing, T.M.1
-
22
-
-
56749096848
-
Translation initiation factor IF1 of Bacillus stearothermophilus and Thermus thermophilus substitute for Escherichia coli IF1 in vivo and in vitro without a direct IF1-IF2 interaction
-
Kapralou S, et al. (2008) Translation initiation factor IF1 of Bacillus stearothermophilus and Thermus thermophilus substitute for Escherichia coli IF1 in vivo and in vitro without a direct IF1-IF2 interaction. Mol Microbiol 70(6):1368-1377.
-
(2008)
Mol Microbiol
, vol.70
, Issue.6
, pp. 1368-1377
-
-
Kapralou, S.1
-
23
-
-
0030920782
-
G protein mechanisms: Insights from structural analysis
-
Sprang SR (1997) G protein mechanisms: Insights from structural analysis. Annu Rev Biochem 66:639-678.
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 639-678
-
-
Sprang, S.R.1
-
24
-
-
0004103059
-
-
ASM Press, Washington, DC
-
Hilgenfeld R, Mesters JR, Hogg T (2000) The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions (ASM Press, Washington, DC).
-
(2000)
The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions
-
-
Hilgenfeld, R.1
Mesters, J.R.2
Hogg, T.3
-
25
-
-
0035660343
-
Engaging the ribosome: Universal IFs of translation
-
Roll-Mecak A, Shin BS, Dever TE, Burley SK (2001) Engaging the ribosome: universal IFs of translation. Trends Biochem Sci 26(12):705-709.
-
(2001)
Trends Biochem Sci
, vol.26
, Issue.12
, pp. 705-709
-
-
Roll-Mecak, A.1
Shin, B.S.2
Dever, T.E.3
Burley, S.K.4
-
26
-
-
0034703718
-
X-Ray structures of the universal translation initiation factor IF2/eIF5B: Conformational changes on GDP and GTP binding
-
Roll-Mecak A, Cao C, Dever TE, Burley SK (2000) X-Ray structures of the universal translation initiation factor IF2/eIF5B: Conformational changes on GDP and GTP binding. Cell 103(5):781-792.
-
(2000)
Cell
, vol.103
, Issue.5
, pp. 781-792
-
-
Roll-Mecak, A.1
Cao, C.2
Dever, T.E.3
Burley, S.K.4
-
27
-
-
0026026818
-
The GTPase superfamily: Conserved structure and molecular mechanism
-
Bourne HR, Sanders DA, McCormick F (1991) The GTPase superfamily: Conserved structure and molecular mechanism. Nature 349(6305):117-127.
-
(1991)
Nature
, vol.349
, Issue.6305
, pp. 117-127
-
-
Bourne, H.R.1
Sanders, D.A.2
McCormick, F.3
-
28
-
-
0342264747
-
Late events of translation initiation in bacteria: A kinetic analysis
-
Tomsic J, et al. (2000) Late events of translation initiation in bacteria: A kinetic analysis. EMBO J 19(9):2127-2136.
-
(2000)
EMBO J
, vol.19
, Issue.9
, pp. 2127-2136
-
-
Tomsic, J.1
-
29
-
-
50349097986
-
Cofactor dependent conformational switching of GTPases
-
Hauryliuk V, Hansson S, Ehrenberg M (2008) Cofactor dependent conformational switching of GTPases. Biophys J 95(4):1704-1715.
-
(2008)
Biophys J
, vol.95
, Issue.4
, pp. 1704-1715
-
-
Hauryliuk, V.1
Hansson, S.2
Ehrenberg, M.3
-
30
-
-
0035812714
-
A posttermination ribosomal complex is the guanine nucleotide exchange factor for peptide release factor RF3
-
Zavialov AV, Buckingham RH, Ehrenberg M (2001) A posttermination ribosomal complex is the guanine nucleotide exchange factor for peptide release factor RF3. Cell 107(1):115-124.
-
(2001)
Cell
, vol.107
, Issue.1
, pp. 115-124
-
-
Zavialov, A.V.1
Buckingham, R.H.2
Ehrenberg, M.3
-
31
-
-
20444393817
-
Guanine-nucleotide exchange on ribosome-bound elongation factor G initiates the translocation of tRNAs
-
Zavialov AV, Hauryliuk VV, Ehrenberg M (2005) Guanine-nucleotide exchange on ribosome-bound elongation factor G initiates the translocation of tRNAs. J Biol 4(2):9.
-
(2005)
J Biol
, vol.4
, Issue.2
, pp. 9
-
-
Zavialov, A.V.1
Hauryliuk, V.V.2
Ehrenberg, M.3
-
32
-
-
0033525871
-
In vitro study of two dominant inhibitory GTPase mutants of Escherichia coli translation initiation factor IF2
-
Luchin S, et al. (1999) In vitro study of two dominant inhibitory GTPase mutants of Escherichia coli translation initiation factor IF2. Direct evidence that GTP hydrolysis is necessary for factor recycling. J Biol Chem 274(10):6074-6079.
-
(1999)
Direct Evidence That GTP Hydrolysis Is Necessary for Factor Recycling. J Biol Chem
, vol.274
, Issue.10
, pp. 6074-6079
-
-
Luchin, S.1
-
33
-
-
0142041880
-
The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis
-
Antoun A, Pavlov MY, Andersson K, Tenson T, Ehrenberg M (2003) The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis. EMBO J 22(20):5593-5601.
-
(2003)
EMBO J
, vol.22
, Issue.20
, pp. 5593-5601
-
-
Antoun, A.1
Pavlov, M.Y.2
Andersson, K.3
Tenson, T.4
Ehrenberg, M.5
-
34
-
-
33749021074
-
The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor
-
Milon P, et al. (2006) The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor. Proc Natl Acad Sci USA 103(38):13962-13967.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.38
, pp. 13962-13967
-
-
Milon, P.1
-
35
-
-
2342547059
-
Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering
-
Antoun A, Pavlov MY, Tenson T, Ehrenberg M (2004) Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering. Biol Proced Online 6: 35-54.
-
(2004)
Biol Proced Online
, vol.6
, pp. 35-54
-
-
Antoun, A.1
Pavlov, M.Y.2
Tenson, T.3
Ehrenberg, M.4
-
36
-
-
77950371305
-
The ribosome-bound initiation factor 2 recruits initiator tRNA to the 30S initiation complex
-
Milon P, et al. (2010) The ribosome-bound initiation factor 2 recruits initiator tRNA to the 30S initiation complex. EMBO Rep 11(4):312-316.
-
(2010)
EMBO Rep
, vol.11
, Issue.4
, pp. 312-316
-
-
Milon, P.1
-
37
-
-
84863986007
-
Heterogeneous pathways and timing of factor departure during translation initiation
-
Tsai A, et al. (2012) Heterogeneous pathways and timing of factor departure during translation initiation. Nature 487(7407):390-393.
-
(2012)
Nature
, vol.487
, Issue.7407
, pp. 390-393
-
-
Tsai, A.1
-
38
-
-
0015167209
-
A complex between initiation factor IF2, guanosine triphosphate, and fMet-tRNA: An intermediate in initiation complex formation
-
Lockwood AH, Chakraborty PR, Maitra U (1971) A complex between initiation factor IF2, guanosine triphosphate, and fMet-tRNA: An intermediate in initiation complex formation. Proc Natl Acad Sci USA 68(12):3122-3126.
-
(1971)
Proc Natl Acad Sci USA
, vol.68
, Issue.12
, pp. 3122-3126
-
-
Lockwood, A.H.1
Chakraborty, P.R.2
Maitra, U.3
-
39
-
-
0024448151
-
Calculation of protein extinction coefficients from amino acid sequence data
-
Gill SC, von Hippel PH (1989) Calculation of protein extinction coefficients from amino acid sequence data. Anal Biochem 182(2):319-326.
-
(1989)
Anal Biochem
, vol.182
, Issue.2
, pp. 319-326
-
-
Gill, S.C.1
Von Hippel, P.H.2
-
41
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn MD, et al. (2011) Overview of the CCP4 suite and current developments. Acta Crystallogr D Biol Crystallogr 67(Pt 4):235-242.
-
(2011)
Acta Crystallogr D Biol Crystallogr
, vol.67
, Issue.PART 4
, pp. 235-242
-
-
Winn, M.D.1
-
42
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams PD, et al. (2010) PHENIX: A comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66(Pt 2):213-221.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, Issue.PART 2
, pp. 213-221
-
-
Adams, P.D.1
-
43
-
-
77949535720
-
Features and development of Coot
-
Emsley P, Lohkamp B, Scott WG, Cowtan K (2010) Features and development of Coot. Acta Crystallogr D Biol Crystallogr 66(Pt 4):486-501.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, Issue.PART 4
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
|