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Volumn 382, Issue 1, 2013, Pages 235-245

Evolution of the pair rule gene network: Insights from a centipede

Author keywords

Arthropod; Chilopod; Evolution; Pair rule gene; Pattern formation; Segmentation

Indexed keywords

ANIMAL TISSUE; ARTICLE; CENTIPEDE; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; ECTODERM; EMBRYO; EMBRYO PATTERN FORMATION; ENGRAILED GENE; GENE; GENE ACTIVATION; GENE ACTIVITY; GENE EXPRESSION; GENE IDENTIFICATION; GENE INTERACTION; GENE NETWORK; INSECT; MESODERM; MOLECULAR CLONING; MOLECULAR EVOLUTION; MYRIAPODA; NONHUMAN; PAIR RULE GENE; PAIRED GENE; PHYLOGENY; PRIORITY JOURNAL; SLOPPY PAIRED GENE; STRIGAMIA MARITIMA; TRUNK SEGMENTATION; WINGLESS GENE; ANIMAL; ANIMAL EMBRYO; ANNELID; EMBRYOLOGY; GENE EXPRESSION REGULATION; GENE REGULATORY NETWORK; GENETICS; METABOLISM; MORPHOGENESIS; NUCLEOTIDE SEQUENCE; SEQUENCE HOMOLOGY; TIME;

EID: 84884418817     PISSN: 00121606     EISSN: 1095564X     Source Type: Journal    
DOI: 10.1016/j.ydbio.2013.06.017     Document Type: Article
Times cited : (38)

References (52)
  • 1
    • 0023635756 scopus 로고
    • The molecular basis for metameric pattern in the Drosophila embryo
    • Akam M. The molecular basis for metameric pattern in the Drosophila embryo. Development 1987, 101:1-22.
    • (1987) Development , vol.101 , pp. 1-22
    • Akam, M.1
  • 3
    • 0030460814 scopus 로고    scopus 로고
    • Segmentation and specification of the Drosophila mesoderm
    • Azpiazu N., Lawrence P.A., Vincent J.P., Frasch M. Segmentation and specification of the Drosophila mesoderm. Genes Dev. 1996, 10:3183-3194.
    • (1996) Genes Dev. , vol.10 , pp. 3183-3194
    • Azpiazu, N.1    Lawrence, P.A.2    Vincent, J.P.3    Frasch, M.4
  • 4
    • 0030856621 scopus 로고    scopus 로고
    • Evolution and functional diversification of the paired box (Pax) DNA-binding domains
    • Balczarek K.A., Lai Z.C., Kumar S. Evolution and functional diversification of the paired box (Pax) DNA-binding domains. Mol. Biol. Evol. 1997, 14:829-842.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 829-842
    • Balczarek, K.A.1    Lai, Z.C.2    Kumar, S.3
  • 5
    • 54049119165 scopus 로고    scopus 로고
    • Conserved cluster organization of insect Runx genes
    • Bao R., Friedrich M. Conserved cluster organization of insect Runx genes. Dev. Genes Evol. 2008, 218:567-574.
    • (2008) Dev. Genes Evol. , vol.218 , pp. 567-574
    • Bao, R.1    Friedrich, M.2
  • 6
    • 84857034558 scopus 로고    scopus 로고
    • The embryonic development of the centipede Strigamia maritima
    • Brena C., Akam M. The embryonic development of the centipede Strigamia maritima. Dev. Biol. 2012, 363:290-307.
    • (2012) Dev. Biol. , vol.363 , pp. 290-307
    • Brena, C.1    Akam, M.2
  • 7
    • 44749086994 scopus 로고    scopus 로고
    • The segmentation cascade in the centipede Strigamia maritima: Involvement of the Notch pathway and pair-rule gene homologues
    • Chipman A.D., Akam M. The segmentation cascade in the centipede Strigamia maritima: Involvement of the Notch pathway and pair-rule gene homologues. Dev. Biol. 2008, 319:160-169.
    • (2008) Dev. Biol. , vol.319 , pp. 160-169
    • Chipman, A.D.1    Akam, M.2
  • 8
    • 3342934159 scopus 로고    scopus 로고
    • A double segment periodicity underlies segment generation in centipede development
    • Chipman A.D., Arthur W., Akam M. A double segment periodicity underlies segment generation in centipede development. Curr. Biol. 2004, 14:1250-1255.
    • (2004) Curr. Biol. , vol.14 , pp. 1250-1255
    • Chipman, A.D.1    Arthur, W.2    Akam, M.3
  • 9
    • 1542473814 scopus 로고    scopus 로고
    • Early development and segment formation in the centipede, Strigamia maritima (Geophilomorpha)
    • Chipman A.D., Arthur W., Akam M. Early development and segment formation in the centipede, Strigamia maritima (Geophilomorpha). Evol. Dev. 2004, 6:78-89.
    • (2004) Evol. Dev. , vol.6 , pp. 78-89
    • Chipman, A.D.1    Arthur, W.2    Akam, M.3
  • 10
    • 31544446874 scopus 로고    scopus 로고
    • Specification of neural precursor identity in the geophilomorph centipede Strigamia maritima
    • Chipman A.D., Stollewerk A. Specification of neural precursor identity in the geophilomorph centipede Strigamia maritima. Dev. Biol. 2006, 290:337-350.
    • (2006) Dev. Biol. , vol.290 , pp. 337-350
    • Chipman, A.D.1    Stollewerk, A.2
  • 11
    • 33846212803 scopus 로고    scopus 로고
    • Evolutionary flexibility of pair-rule patterning revealed by functional analysis of secondary pair-rule genes, paired and sloppy-paired in the short-germ insect, Tribolium castaneum
    • Choe C.P., Brown S.J. Evolutionary flexibility of pair-rule patterning revealed by functional analysis of secondary pair-rule genes, paired and sloppy-paired in the short-germ insect, Tribolium castaneum. Dev. Biol. 2007, 302:281-294.
    • (2007) Dev. Biol. , vol.302 , pp. 281-294
    • Choe, C.P.1    Brown, S.J.2
  • 12
    • 58149123332 scopus 로고    scopus 로고
    • Genetic regulation of engrailed and wingless in Tribolium segmentation and the evolution of pair-rule segmentation
    • Choe C.P., Brown S.J. Genetic regulation of engrailed and wingless in Tribolium segmentation and the evolution of pair-rule segmentation. Dev. Biol. 2009, 325:482-491.
    • (2009) Dev. Biol. , vol.325 , pp. 482-491
    • Choe, C.P.1    Brown, S.J.2
  • 13
    • 33646263377 scopus 로고    scopus 로고
    • A pair-rule gene circuit defines segments sequentially in the short-germ insect Tribolium castaneum
    • Choe C.P., Miller S.C., Brown S.J. A pair-rule gene circuit defines segments sequentially in the short-germ insect Tribolium castaneum. Proc. Natl. Acad. Sci. USA 2006, 103:6560-6564.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 6560-6564
    • Choe, C.P.1    Miller, S.C.2    Brown, S.J.3
  • 14
    • 58849086223 scopus 로고    scopus 로고
    • RUNX proteins in transcription factor networks that regulate T-cell lineage choice
    • Collins A., Littman D.R., Taniuchi I. RUNX proteins in transcription factor networks that regulate T-cell lineage choice. Nat. Rev. Immunol. 2009, 9:106-115.
    • (2009) Nat. Rev. Immunol. , vol.9 , pp. 106-115
    • Collins, A.1    Littman, D.R.2    Taniuchi, I.3
  • 15
    • 41649085582 scopus 로고    scopus 로고
    • Self-regulatory circuits in dorsoventral axis formation of the short-germ beetle Tribolium castaneum
    • da Fonseca R.N., von Levetzow C., Kaischeuer P., Basal A., van der Zee M., Roth S. Self-regulatory circuits in dorsoventral axis formation of the short-germ beetle Tribolium castaneum. Dev. Cell. 2008, 14:605-615.
    • (2008) Dev. Cell. , vol.14 , pp. 605-615
    • da Fonseca, R.N.1    von Levetzow, C.2    Kaischeuer, P.3    Basal, A.4    van der Zee, M.5    Roth, S.6
  • 16
    • 34250658361 scopus 로고    scopus 로고
    • Evolutionary conservation and divergence of the segmentation process in arthropods
    • Damen W.G.M. Evolutionary conservation and divergence of the segmentation process in arthropods. Dev. Dyn. 2007, 236:1379-1391.
    • (2007) Dev. Dyn. , vol.236 , pp. 1379-1391
    • Damen, W.G.M.1
  • 17
    • 28244443321 scopus 로고    scopus 로고
    • Pair rule gene orthologs in spider segmentation
    • Damen W.G.M., Janssen R., Prpic N.M. Pair rule gene orthologs in spider segmentation. Evol. Dev. 2005, 7:618-628.
    • (2005) Evol. Dev. , vol.7 , pp. 618-628
    • Damen, W.G.M.1    Janssen, R.2    Prpic, N.M.3
  • 18
    • 0034712927 scopus 로고    scopus 로고
    • Expression patterns of hairy, even-skipped, and runt in the spider Cupiennius salei imply that these genes were segmentation genes in a basal arthropod
    • Damen W.G.M., Weller M., Tautz D. Expression patterns of hairy, even-skipped, and runt in the spider Cupiennius salei imply that these genes were segmentation genes in a basal arthropod. Proc. Natl. Acad. Sci. USA 2000, 97:4515-4519.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 4515-4519
    • Damen, W.G.M.1    Weller, M.2    Tautz, D.3
  • 19
    • 0034793678 scopus 로고    scopus 로고
    • Pax group III genes and the evolution of insect pair-rule patterning
    • Davis G.K., Jaramillo C.A., Patel N.H. Pax group III genes and the evolution of insect pair-rule patterning. Development 2001, 128:3445-3458.
    • (2001) Development , vol.128 , pp. 3445-3458
    • Davis, G.K.1    Jaramillo, C.A.2    Patel, N.H.3
  • 20
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 21
    • 84884416961 scopus 로고    scopus 로고
    • Segment formation in the centipede Strigamia maritima with emphasis on segment polarity genes and environmental factors (doctoral thesis)
    • National University of Ireland Galway, Galway.
    • Eibner, C., 2010. Segment formation in the centipede Strigamia maritima with emphasis on segment polarity genes and environmental factors (doctoral thesis). National University of Ireland Galway, Galway.
    • (2010)
    • Eibner, C.1
  • 22
    • 41949115334 scopus 로고    scopus 로고
    • Hedgehog signaling pathway function conserved in Tribolium segmentation
    • Farzana L., Brown S.J. Hedgehog signaling pathway function conserved in Tribolium segmentation. Dev. Genes Evol. 2008, 218:181-192.
    • (2008) Dev. Genes Evol. , vol.218 , pp. 181-192
    • Farzana, L.1    Brown, S.J.2
  • 23
    • 0033071157 scopus 로고    scopus 로고
    • Intersecting signalling and transcriptional pathways in Drosophila heart specification
    • Frasch M. Intersecting signalling and transcriptional pathways in Drosophila heart specification. Semin. Cell Dev. Biol. 1999, 10:61-71.
    • (1999) Semin. Cell Dev. Biol. , vol.10 , pp. 61-71
    • Frasch, M.1
  • 24
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 25
    • 12144256211 scopus 로고    scopus 로고
    • Tribolium castaneum twist: gastrulation and mesoderm formation in a short-germ beetle
    • Handel K., Basal A., Fan X., Roth S. Tribolium castaneum twist: gastrulation and mesoderm formation in a short-germ beetle. Dev. Genes Evol. 2005, 215:13-31.
    • (2005) Dev. Genes Evol. , vol.215 , pp. 13-31
    • Handel, K.1    Basal, A.2    Fan, X.3    Roth, S.4
  • 26
    • 84355161557 scopus 로고    scopus 로고
    • The functional relationship between ectodermal and mesodermal segmentation in the crustacean, Parhyale hawaiensis
    • Hannibal R.L., Price A.L., Patel N.H. The functional relationship between ectodermal and mesodermal segmentation in the crustacean, Parhyale hawaiensis. Dev. Biol. 2012, 361:427-438.
    • (2012) Dev. Biol. , vol.361 , pp. 427-438
    • Hannibal, R.L.1    Price, A.L.2    Patel, N.H.3
  • 27
    • 84884416226 scopus 로고    scopus 로고
    • TreeCollapserCL 〈〉
    • Hodcroft, E., 2012. TreeCollapserCL. http://emmahodcroft.com/TreeCollapseCL3.html.
    • (2012)
    • Hodcroft, E.1
  • 28
    • 0001924796 scopus 로고
    • Interactions between the pair-rule genes runt, hairy, even-skipped and fushi-tarazu and the establishment of periodic pattern in the Drosophila embryo
    • Ingham P., Gergen P. Interactions between the pair-rule genes runt, hairy, even-skipped and fushi-tarazu and the establishment of periodic pattern in the Drosophila embryo. Development 1988, 104:51-60.
    • (1988) Development , vol.104 , pp. 51-60
    • Ingham, P.1    Gergen, P.2
  • 29
    • 0024075160 scopus 로고
    • The molecular genetics of embryonic pattern formation in Drosophila
    • Ingham P.W. The molecular genetics of embryonic pattern formation in Drosophila. Nature 1988, 335:25-34.
    • (1988) Nature , vol.335 , pp. 25-34
    • Ingham, P.W.1
  • 32
    • 0141685914 scopus 로고    scopus 로고
    • The pattern of segment formation, as revealed by engrailed expression, in a centipede with a variable number of segments
    • Kettle C., Johnstone J., Jowett T., Arthur H., Arthur W. The pattern of segment formation, as revealed by engrailed expression, in a centipede with a variable number of segments. Evol. Dev. 2003, 5:198-207.
    • (2003) Evol. Dev. , vol.5 , pp. 198-207
    • Kettle, C.1    Johnstone, J.2    Jowett, T.3    Arthur, H.4    Arthur, W.5
  • 33
    • 0023251895 scopus 로고
    • Borders of parasegments in Drosophila embryos are delimited by the fushi-tarazu and even-skipped genes
    • Lawrence P.A., Johnston P., Macdonald P., Struhl G. Borders of parasegments in Drosophila embryos are delimited by the fushi-tarazu and even-skipped genes. Nature 1987, 328:440-442.
    • (1987) Nature , vol.328 , pp. 440-442
    • Lawrence, P.A.1    Johnston, P.2    Macdonald, P.3    Struhl, G.4
  • 34
    • 0942287278 scopus 로고    scopus 로고
    • Survey of forkhead domain encoding genes in the Drosophila genome: classification and embryonic expression patterns
    • Lee H.H., Frasch M. Survey of forkhead domain encoding genes in the Drosophila genome: classification and embryonic expression patterns. Dev. Dyn. 2004, 229:357-366.
    • (2004) Dev. Dyn. , vol.229 , pp. 357-366
    • Lee, H.H.1    Frasch, M.2
  • 35
    • 0034598832 scopus 로고    scopus 로고
    • Evidence for stabilizing selection in a eukaryotic enhancer element
    • Ludwig M.Z., Bergman C., Patel N.H., Kreitman M. Evidence for stabilizing selection in a eukaryotic enhancer element. Nature 2000, 403:564-567.
    • (2000) Nature , vol.403 , pp. 564-567
    • Ludwig, M.Z.1    Bergman, C.2    Patel, N.H.3    Kreitman, M.4
  • 36
    • 0141888247 scopus 로고    scopus 로고
    • Phylogenetic relationships of the Fox (Forkhead) gene family in the Bilateria
    • Mazet F., Yu J.K., Liberles D.A., Holland L.Z., Shimeld S.M. Phylogenetic relationships of the Fox (Forkhead) gene family in the Bilateria. Gene 2003, 316:79-89.
    • (2003) Gene , vol.316 , pp. 79-89
    • Mazet, F.1    Yu, J.K.2    Liberles, D.A.3    Holland, L.Z.4    Shimeld, S.M.5
  • 37
    • 0019133661 scopus 로고
    • Mutations affecting segment number and polarity in Drosophila
    • Nusslein-Volhard C., Wieschaus E. Mutations affecting segment number and polarity in Drosophila. Nature 1980, 287:795-801.
    • (1980) Nature , vol.287 , pp. 795-801
    • Nusslein-Volhard, C.1    Wieschaus, E.2
  • 38
    • 0001240840 scopus 로고
    • Blastoderm segmentation
    • Cold Spring Harbor Laboratory Press, USA, M. Bate, A. Martinez Arias (Eds.)
    • Pankratz M.J., Jaeckle H. Blastoderm segmentation. The Development of Drosophila melanogaster 1993, 467-516. Cold Spring Harbor Laboratory Press, USA. M. Bate, A. Martinez Arias (Eds.).
    • (1993) The Development of Drosophila melanogaster , pp. 467-516
    • Pankratz, M.J.1    Jaeckle, H.2
  • 39
    • 0028762421 scopus 로고
    • Pair-rule expression patterns of even-skipped are found in both short-germ and long-germ beetles
    • Patel N.H., Condron B.G., Zinn K. Pair-rule expression patterns of even-skipped are found in both short-germ and long-germ beetles. Nature 1994, 367:429-434.
    • (1994) Nature , vol.367 , pp. 429-434
    • Patel, N.H.1    Condron, B.G.2    Zinn, K.3
  • 40
    • 28844499831 scopus 로고    scopus 로고
    • Arthropod segmentation: beyond the Drosophila paradigm
    • Peel A.D., Chipman A.D., Akam M. Arthropod segmentation: beyond the Drosophila paradigm. Nat. Rev. Genet. 2005, 6:905-916.
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 905-916
    • Peel, A.D.1    Chipman, A.D.2    Akam, M.3
  • 41
    • 85029435044 scopus 로고    scopus 로고
    • Rambaut, A., 2009. FigTree. http://tree.bio.ed.ac.uk/software/figtree/.
    • (2009)
    • Rambaut, A.1
  • 43
    • 0041677607 scopus 로고    scopus 로고
    • Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation
    • Romano L.A., Wray G.A. Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation. Development 2003, 130:4187-4199.
    • (2003) Development , vol.130 , pp. 4187-4199
    • Romano, L.A.1    Wray, G.A.2
  • 45
    • 84860000652 scopus 로고    scopus 로고
    • A segmentation clock with two-segment periodicity in insects
    • Sarrazin A.F., Peel A.D., Averof M. A segmentation clock with two-segment periodicity in insects. Science 2012, 336:338-341.
    • (2012) Science , vol.336 , pp. 338-341
    • Sarrazin, A.F.1    Peel, A.D.2    Averof, M.3
  • 46
    • 79959445766 scopus 로고    scopus 로고
    • How to make stripes: deciphering the transition from non-periodic to periodic patterns in Drosophila segmentation
    • Schroeder M.D., Greer C., Gaul U. How to make stripes: deciphering the transition from non-periodic to periodic patterns in Drosophila segmentation. Development 2011, 138:3067-3078.
    • (2011) Development , vol.138 , pp. 3067-3078
    • Schroeder, M.D.1    Greer, C.2    Gaul, U.3
  • 49
    • 3042753813 scopus 로고    scopus 로고
    • Ftz modulates Runt-dependent activation and repression of segment-polarity gene transcription
    • Swantek D., Gergen J.P. Ftz modulates Runt-dependent activation and repression of segment-polarity gene transcription. Development 2004, 131:2281-2290.
    • (2004) Development , vol.131 , pp. 2281-2290
    • Swantek, D.1    Gergen, J.P.2
  • 50
    • 0035051264 scopus 로고    scopus 로고
    • Developmental system drift and flexibility in evolutionary trajectories
    • True J.R., Haag E.S. Developmental system drift and flexibility in evolutionary trajectories. Evol. Dev. 2001, 3:109-119.
    • (2001) Evol. Dev. , vol.3 , pp. 109-119
    • True, J.R.1    Haag, E.S.2
  • 51
    • 79954585801 scopus 로고    scopus 로고
    • Hairless is a cofactor for Runt-dependent transcriptional regulation
    • Walrad P.B., Hang S., Gergen J.P. Hairless is a cofactor for Runt-dependent transcriptional regulation. Mol. Biol. Cell. 2011, 22:1364-1374.
    • (2011) Mol. Biol. Cell. , vol.22 , pp. 1364-1374
    • Walrad, P.B.1    Hang, S.2    Gergen, J.P.3
  • 52
    • 84867016581 scopus 로고    scopus 로고
    • Pair-rule gene orthologues have unexpected maternal roles in the honeybee (Apis mellifera)
    • Wilson M.J., Dearden P.K. Pair-rule gene orthologues have unexpected maternal roles in the honeybee (Apis mellifera). Plos One 2012, 7.
    • (2012) Plos One , pp. 7
    • Wilson, M.J.1    Dearden, P.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.