-
1
-
-
33645553223
-
Phylogeny and megasystematics of phagotrophic heterokonts (kingdom Chromista)
-
Cavalier-Smith T, Chao EE, (2006) Phylogeny and megasystematics of phagotrophic heterokonts (kingdom Chromista). Journal of molecular evolution 62: 388-420.
-
(2006)
Journal of Molecular Evolution
, vol.62
, pp. 388-420
-
-
Cavalier-Smith, T.1
Chao, E.E.2
-
2
-
-
33748329373
-
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
-
Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RH, et al. (2006) Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313: 1261-1266.
-
(2006)
Science
, vol.313
, pp. 1261-1266
-
-
Tyler, B.M.1
Tripathy, S.2
Zhang, X.3
Dehal, P.4
Jiang, R.H.5
-
3
-
-
77955687133
-
Oomycete-plant coevolution: recent advances and future prospects
-
Thines M, Kamoun S, (2010) Oomycete-plant coevolution: recent advances and future prospects. Current opinion in plant biology 13: 427-433.
-
(2010)
Current Opinion in Plant Biology
, vol.13
, pp. 427-433
-
-
Thines, M.1
Kamoun, S.2
-
4
-
-
80755152413
-
Fifty years of oomycetes-from consolidation to evolutionary and genomic exploration
-
Levesque CA, (2011) Fifty years of oomycetes-from consolidation to evolutionary and genomic exploration. Fungal Diversity 50: 35-46.
-
(2011)
Fungal Diversity
, vol.50
, pp. 35-46
-
-
Levesque, C.A.1
-
5
-
-
0014243809
-
Cell wall chemistry, morphogenesis, and taxonomy of fungi
-
Bartnicki-Garcia S, (1968) Cell wall chemistry, morphogenesis, and taxonomy of fungi. Annual review of microbiology 22: 87-108.
-
(1968)
Annual Review of Microbiology
, vol.22
, pp. 87-108
-
-
Bartnicki-Garcia, S.1
-
6
-
-
1842362467
-
Hyphal wall chemistry of Leptomitus lacteus
-
Aronson JM, Lin CC, (1978) Hyphal wall chemistry of Leptomitus lacteus. Mycologia 70: 363-369.
-
(1978)
Mycologia
, vol.70
, pp. 363-369
-
-
Aronson, J.M.1
Lin, C.C.2
-
7
-
-
0002635666
-
Characterization of chitin and chitin synthase from the cellulosic cell-wall fungus Saprolegnia-monoica
-
Bulone V, Chanzy H, Gay L, Girard V, Fevre M, (1992) Characterization of chitin and chitin synthase from the cellulosic cell-wall fungus Saprolegnia-monoica. Experimental Mycology 16: 8-21.
-
(1992)
Experimental Mycology
, vol.16
, pp. 8-21
-
-
Bulone, V.1
Chanzy, H.2
Gay, L.3
Girard, V.4
Fevre, M.5
-
9
-
-
55749114076
-
Cell wall chitosaccharides are essential components and exposed patterns of the phytopathogenic oomycete Aphanomyces euteiches
-
Badreddine I, Lafitte C, Heux L, Skandalis N, Spanou Z, et al. (2008) Cell wall chitosaccharides are essential components and exposed patterns of the phytopathogenic oomycete Aphanomyces euteiches. Eukaryotic cell 7: 1980-1993.
-
(2008)
Eukaryotic Cell
, vol.7
, pp. 1980-1993
-
-
Badreddine, I.1
Lafitte, C.2
Heux, L.3
Skandalis, N.4
Spanou, Z.5
-
10
-
-
70349281388
-
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
-
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, et al. (2009) Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 461: 393-398.
-
(2009)
Nature
, vol.461
, pp. 393-398
-
-
Haas, B.J.1
Kamoun, S.2
Zody, M.C.3
Jiang, R.H.Y.4
Handsaker, R.E.5
-
11
-
-
84865734218
-
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici
-
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, et al. (2012) Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici. Molecular plant-microbe interactions: MPMI 25: 1350-1360.
-
(2012)
Molecular Plant-Microbe Interactions: MPMI
, vol.25
, pp. 1350-1360
-
-
Lamour, K.H.1
Mudge, J.2
Gobena, D.3
Hurtado-Gonzales, O.P.4
Schmutz, J.5
-
12
-
-
77954417202
-
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
-
Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, et al. (2010) Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biology 11: R73.
-
(2010)
Genome Biology
, vol.11
-
-
Lévesque, C.A.1
Brouwer, H.2
Cano, L.3
Hamilton, J.P.4
Holt, C.5
-
13
-
-
78650126298
-
Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome
-
Baxter L, Tripathy S, Ishaque N, Boot N, Cabral A, et al. (2010) Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome. Science 330: 1549-1551.
-
(2010)
Science
, vol.330
, pp. 1549-1551
-
-
Baxter, L.1
Tripathy, S.2
Ishaque, N.3
Boot, N.4
Cabral, A.5
-
14
-
-
13444305471
-
Molecular phylogeny and taxonomy of the genus Pythium
-
Lévesque CA, De Cock AWAM, (2004) Molecular phylogeny and taxonomy of the genus Pythium. Mycological Research 108: 1363-1383.
-
(2004)
Mycological Research
, vol.108
, pp. 1363-1383
-
-
Lévesque, C.A.1
De Cock, A.W.A.M.2
-
15
-
-
80054066292
-
DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer
-
Robideau GP, De Cock AW, Coffey MD, Voglmayr H, Brouwer H, et al. (2011) DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer. Molecular ecology resources 11: 1002-1011.
-
(2011)
Molecular Ecology Resources
, vol.11
, pp. 1002-1011
-
-
Robideau, G.P.1
De Cock, A.W.2
Coffey, M.D.3
Voglmayr, H.4
Brouwer, H.5
-
16
-
-
0010837105
-
Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene
-
Martin FN, (2000) Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene. Mycologia 92: 711-727.
-
(2000)
Mycologia
, vol.92
, pp. 711-727
-
-
Martin, F.N.1
-
17
-
-
33745369365
-
Diversity and evolution of 5S rRNA gene family organization in Pythium
-
Bedard JEJ, Schurko AM, De Cock A, Klassen GR, (2006) Diversity and evolution of 5S rRNA gene family organization in Pythium. Mycological Research 110: 86-95.
-
(2006)
Mycological Research
, vol.110
, pp. 86-95
-
-
Bedard, J.E.J.1
Schurko, A.M.2
De Cock, A.3
Klassen, G.R.4
-
18
-
-
79551687534
-
Taxonomy, DNA barcoding and phylogeny of three new species of Pythium from Canada
-
Bala K, Robideau GP, Desaulniers N, de Cock AW, Levesque CA, (2010) Taxonomy, DNA barcoding and phylogeny of three new species of Pythium from Canada. Persoonia 25: 22-31.
-
(2010)
Persoonia
, vol.25
, pp. 22-31
-
-
Bala, K.1
Robideau, G.P.2
Desaulniers, N.3
de Cock, A.W.4
Levesque, C.A.5
-
19
-
-
79551686854
-
Phytopythium Abad, de Cock, Bala, Robideau, Lodhi & Lévesque, gen. nov
-
Abad ZGdCA, Bala K, Robideau GP, Lodhi AM, Lévesque CA, (2010) Phytopythium Abad, de Cock, Bala, Robideau, Lodhi & Lévesque, gen. nov. Persoonia 24.
-
(2010)
Persoonia
, vol.24
-
-
Abad, Z.G.D.C.A.1
Bala, K.2
Robideau, G.P.3
Lodhi, A.M.4
Lévesque, C.A.5
-
20
-
-
84871209912
-
Molecular detection and quantification of Pythium species - evolving taxonomy, new tools and challenges
-
Schroeder KL, Martin FN, de Cock AW, Lévesque CA, Spies CFJ, et al. (2012) Molecular detection and quantification of Pythium species- evolving taxonomy, new tools and challenges. Plant Disease In press.
-
(2012)
Plant Disease
-
-
Schroeder, K.L.1
Martin, F.N.2
de Cock, A.W.3
Lévesque, C.A.4
Spies, C.F.J.5
-
21
-
-
0003574283
-
-
Amsterdam; Boston: Elsevier Academic Press. xxiii
-
Agrios GN (2005) Plant pathology. Amsterdam; Boston: Elsevier Academic Press. xxiii, 922 p. p.
-
(2005)
Plant pathology
, pp. 922
-
-
Agrios, G.N.1
-
22
-
-
0343280419
-
-
Boston: Jones and Bartlett Publishers. xli
-
Dick M, Margulis L (1990) Handbook of protoctista: the structure, cultivation, habitats, and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants, and fungi: a guide to the algae, ciliates, foraminifera, sporozoa, water molds, slime molds, and the other protoctists. Boston: Jones and Bartlett Publishers. xli, 914 p. p.
-
(1990)
Handbook of protoctista: The structure, cultivation, habitats, and life histories of the eukaryotic microorganisms and their descendants exclusive of animals, plants, and fungi: A guide to the algae, ciliates, foraminifera, sporozoa, water molds, slime molds, and the other protoctists
, pp. 914
-
-
Dick, M.1
Margulis, L.2
-
24
-
-
3242782620
-
-
editor, Oxford: Blackwell Publishing
-
Rose JKC, editor (2003) The Plant Cell Wall. Oxford: Blackwell Publishing. 381 p.
-
(2003)
The Plant Cell Wall
, pp. 381
-
-
Rose, J.K.C.1
-
25
-
-
84865540130
-
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
-
Suzuki H, Macdonald J, Syed K, Salamov A, Hori C, et al. (2012) Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. BMC genomics 13: 444.
-
(2012)
BMC Genomics
, vol.13
, pp. 444
-
-
Suzuki, H.1
Macdonald, J.2
Syed, K.3
Salamov, A.4
Hori, C.5
-
26
-
-
67650578182
-
Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae
-
Coutinho PM, Andersen MR, Kolenova K, vanKuyk PA, Benoit I, et al. (2009) Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae. Fungal genetics and biology: FG & B 46 Suppl 1: S161-S169.
-
(2009)
Fungal Genetics and Biology: FG & B
, vol.46
, Issue.SUPPL.
-
-
Coutinho, P.M.1
Andersen, M.R.2
Kolenova, K.3
vanKuyk, P.A.4
Benoit, I.5
-
27
-
-
0036751423
-
Characterization and evolutionary analysis of a large polygalacturonase gene family in the oomycete plant pathogen Phytophthora cinnamomi
-
Götesson A, Marshall JS, Jones DA, Hardham AR, (2002) Characterization and evolutionary analysis of a large polygalacturonase gene family in the oomycete plant pathogen Phytophthora cinnamomi. Molecular plant-microbe interactions: MPMI 15: 907-921.
-
(2002)
Molecular Plant-Microbe Interactions: MPMI
, vol.15
, pp. 907-921
-
-
Götesson, A.1
Marshall, J.S.2
Jones, D.A.3
Hardham, A.R.4
-
28
-
-
60549116487
-
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
-
Martinez D, Challacombe J, Morgenstern I, Hibbett D, Schmoll M, et al. (2009) Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proceedings of the National Academy of Sciences of the United States of America 106: 1954-1959.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 1954-1959
-
-
Martinez, D.1
Challacombe, J.2
Morgenstern, I.3
Hibbett, D.4
Schmoll, M.5
-
29
-
-
0031437264
-
Aggressiveness and production of cell-wall degrading enzymes by Pythium violae, Pythium sulcatum and Pythium ultimum, responsible for cavity spot on carrots
-
Campion C, Massiot P, Rouxel F, (1997) Aggressiveness and production of cell-wall degrading enzymes by Pythium violae, Pythium sulcatum and Pythium ultimum, responsible for cavity spot on carrots. European Journal of Plant Pathology 103: 725-735.
-
(1997)
European Journal of Plant Pathology
, vol.103
, pp. 725-735
-
-
Campion, C.1
Massiot, P.2
Rouxel, F.3
-
30
-
-
0028007674
-
Deconstructing the Cell-Wall
-
Walton JD, (1994) Deconstructing the Cell-Wall. Plant Physiology 104: 1113-1118.
-
(1994)
Plant Physiology
, vol.104
, pp. 1113-1118
-
-
Walton, J.D.1
-
31
-
-
0142061165
-
Loss of function of the Fusarium oxysporum SNF1 gene reduces virulence on cabbage and Arabidopsis
-
Ospina-Giraldo MD, Mullins E, Kang S, (2003) Loss of function of the Fusarium oxysporum SNF1 gene reduces virulence on cabbage and Arabidopsis. Current Genetics 44: 49-57.
-
(2003)
Current Genetics
, vol.44
, pp. 49-57
-
-
Ospina-Giraldo, M.D.1
Mullins, E.2
Kang, S.3
-
32
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, et al. (2009) The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Research 37: D233-D238.
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
-
33
-
-
77957156894
-
The CAZyome of Phytophthora spp.: A comprehensive analysis of the gene complement coding for carbohydrate-active enzymes in species of the genus Phytophthora
-
Ospina-Giraldo MD, Griffith JG, Laird EW, Mingora C, (2010) The CAZyome of Phytophthora spp.: A comprehensive analysis of the gene complement coding for carbohydrate-active enzymes in species of the genus Phytophthora. Bmc Genomics 11.
-
(2010)
Bmc Genomics
, vol.11
-
-
Ospina-Giraldo, M.D.1
Griffith, J.G.2
Laird, E.W.3
Mingora, C.4
-
34
-
-
0024419181
-
Cellulase Families Revealed by Hydrophobic Cluster-Analysis
-
Henrissat B, Claeyssens M, Tomme P, Lemesle L, Mornon JP, (1989) Cellulase Families Revealed by Hydrophobic Cluster-Analysis. Gene 81: 83-95.
-
(1989)
Gene
, vol.81
, pp. 83-95
-
-
Henrissat, B.1
Claeyssens, M.2
Tomme, P.3
Lemesle, L.4
Mornon, J.P.5
-
35
-
-
0034333059
-
Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases
-
Harvey AJ, Hrmova M, De Gori R, Varghese JN, Fincher GB, (2000) Comparative modeling of the three-dimensional structures of family 3 glycoside hydrolases. Proteins-Structure Function and Genetics 41: 257-269.
-
(2000)
Proteins-Structure Function and Genetics
, vol.41
, pp. 257-269
-
-
Harvey, A.J.1
Hrmova, M.2
De Gori, R.3
Varghese, J.N.4
Fincher, G.B.5
-
36
-
-
0038413775
-
Bifunctional family 3 glycoside hydrolases from barley with alpha -L-arabinofuranosidase and beta -D-xylosidase activity. Characterization, primary structures, and COOH-terminal processing
-
Lee RC, Hrmova M, Burton RA, Lahnstein J, Fincher GB, (2003) Bifunctional family 3 glycoside hydrolases from barley with alpha-L-arabinofuranosidase and beta-D-xylosidase activity. Characterization, primary structures, and COOH-terminal processing. The Journal of biological chemistry 278: 5377-5387.
-
(2003)
The Journal of Biological Chemistry
, vol.278
, pp. 5377-5387
-
-
Lee, R.C.1
Hrmova, M.2
Burton, R.A.3
Lahnstein, J.4
Fincher, G.B.5
-
37
-
-
34548249519
-
Variation in relative substrate specificity of bifunctional beta-D-xylosidase/alpha-L-arabinofuranosidase by single-site mutations: roles of substrate distortion and recognition
-
Jordan DB, Li XL, (2007) Variation in relative substrate specificity of bifunctional beta-D-xylosidase/alpha-L-arabinofuranosidase by single-site mutations: roles of substrate distortion and recognition. Biochimica et biophysica acta 1774: 1192-1198.
-
(2007)
Biochimica Et Biophysica Acta
, vol.1774
, pp. 1192-1198
-
-
Jordan, D.B.1
Li, X.L.2
-
38
-
-
78651390306
-
Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level
-
Battaglia E, Benoit I, van den Brink J, Wiebenga A, Coutinho PM, et al. (2011) Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level. Bmc Genomics 12.
-
(2011)
Bmc Genomics
, vol.12
-
-
Battaglia, E.1
Benoit, I.2
van den Brink, J.3
Wiebenga, A.4
Coutinho, P.M.5
-
39
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. Journal of molecular biology 215: 403-410.
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
40
-
-
78149297086
-
CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database
-
Park BH, Karpinets TV, Syed MH, Leuze MR, Uberbacher EC, (2010) CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database. Glycobiology 20: 1574-1584.
-
(2010)
Glycobiology
, vol.20
, pp. 1574-1584
-
-
Park, B.H.1
Karpinets, T.V.2
Syed, M.H.3
Leuze, M.R.4
Uberbacher, E.C.5
-
41
-
-
84864442502
-
dbCAN: a web resource for automated carbohydrate-active enzyme annotation
-
Yin Y, Mao X, Yang J, Chen X, Mao F, et al. (2012) dbCAN: a web resource for automated carbohydrate-active enzyme annotation. Nucleic acids research 40: W445-451.
-
(2012)
Nucleic Acids Research
, vol.40
-
-
Yin, Y.1
Mao, X.2
Yang, J.3
Chen, X.4
Mao, F.5
-
42
-
-
57749100303
-
Cellulose synthesis in Phytophthora infestans is required for normal appressorium formation and successful infection of potato (vol 20, pg 720, 2008)
-
Grenville-Briggs LJ, Anderson VL, Fugelstad J, Avrova AO, Bouzenzana J, et al. (2008) Cellulose synthesis in Phytophthora infestans is required for normal appressorium formation and successful infection of potato (vol 20, pg 720, 2008). Plant Cell 20: 1725-1725.
-
(2008)
Plant Cell
, vol.20
, pp. 1725
-
-
Grenville-Briggs, L.J.1
Anderson, V.L.2
Fugelstad, J.3
Avrova, A.O.4
Bouzenzana, J.5
-
43
-
-
0011323175
-
Pectinolytic and cellulolytic enzyme production by Pythium aphanidermatum
-
Winstead NN, McCombs CL, (1961) Pectinolytic and cellulolytic enzyme production by Pythium aphanidermatum. Phytopathology 51: 270
-
(1961)
Phytopathology
, vol.51
, pp. 270
-
-
Winstead, N.N.1
McCombs, C.L.2
-
45
-
-
6844254685
-
Influence of calcium nutrition on pectolytic and cellulolytic enzyme activity of extracts of highland bentgrass foliage blighted by Pythium ultimum
-
Moore LD, Couch HB, (1968) Influence of calcium nutrition on pectolytic and cellulolytic enzyme activity of extracts of highland bentgrass foliage blighted by Pythium ultimum. Phytopathology 58: 833
-
(1968)
Phytopathology
, vol.58
, pp. 833
-
-
Moore, L.D.1
Couch, H.B.2
-
46
-
-
0016366647
-
Production of a Toxic Metabolite and Pectolytic Enzyme by Pythium Butleri
-
Janardha Kk, Husain A, (1974) Production of a Toxic Metabolite and Pectolytic Enzyme by Pythium Butleri. Mycopathologia Et Mycologia Applicata 52: 325-330.
-
(1974)
Mycopathologia Et Mycologia Applicata
, vol.52
, pp. 325-330
-
-
Janardha, K.K.1
Husain, A.2
-
47
-
-
0016237433
-
Production of Pectinases and Cellulase by Six Pythium Species Isolated from Necrotic Strawberry Roots
-
Nemec S, (1974) Production of Pectinases and Cellulase by Six Pythium Species Isolated from Necrotic Strawberry Roots. Mycopathologia Et Mycologia Applicata 52: 283-289.
-
(1974)
Mycopathologia Et Mycologia Applicata
, vol.52
, pp. 283-289
-
-
Nemec, S.1
-
48
-
-
0004070764
-
Cellulose Decomposition by Pythium and Its Relevance to Substrate-Groups of Fungi
-
Deacon JW, (1979) Cellulose Decomposition by Pythium and Its Relevance to Substrate-Groups of Fungi. Transactions of the British Mycological Society 72: 469-477.
-
(1979)
Transactions of the British Mycological Society
, vol.72
, pp. 469-477
-
-
Deacon, J.W.1
-
49
-
-
0000723865
-
Ultrastructural and Cytochemical Studies of Fungal Development and Host Reactions in Cucumber Plants Infected by Pythium-Ultimum
-
Cherif M, Benhamou N, Belanger RR, (1991) Ultrastructural and Cytochemical Studies of Fungal Development and Host Reactions in Cucumber Plants Infected by Pythium-Ultimum. Physiological and Molecular Plant Pathology 39: 353-375.
-
(1991)
Physiological and Molecular Plant Pathology
, vol.39
, pp. 353-375
-
-
Cherif, M.1
Benhamou, N.2
Belanger, R.R.3
-
50
-
-
0033779516
-
Cytological effects of cellulases in the parasitism of Phytophthora parasitica by Pythium oligandrum
-
Picard K, Tirilly Y, Benhamou N, (2000) Cytological effects of cellulases in the parasitism of Phytophthora parasitica by Pythium oligandrum. Applied and Environmental Microbiology 66: 4305-4314.
-
(2000)
Applied and Environmental Microbiology
, vol.66
, pp. 4305-4314
-
-
Picard, K.1
Tirilly, Y.2
Benhamou, N.3
-
51
-
-
0031838929
-
A comparative study of carrot root tissue colonization and cell wall degradation by Pythium violae and Pythium ultimum, two pathogens responsible for cavity spot
-
Campion C, Vian B, Nicole M, Rouxel F, (1998) A comparative study of carrot root tissue colonization and cell wall degradation by Pythium violae and Pythium ultimum, two pathogens responsible for cavity spot. Canadian Journal of Microbiology 44: 221-230.
-
(1998)
Canadian Journal of Microbiology
, vol.44
, pp. 221-230
-
-
Campion, C.1
Vian, B.2
Nicole, M.3
Rouxel, F.4
-
52
-
-
0347866992
-
-
London: Hutchinson University Library
-
Burges A (1958) Micro-organisms in the soil. London: Hutchinson University Library. 188 p. p.
-
(1958)
Micro-organisms in the soil
, pp. 188
-
-
Burges, A.1
-
54
-
-
0028173885
-
A Phanerochaete-Chrysosporium Beta-D-Glucosidase/Beta-D-Xylosidase with Specificity for (1-]3)-Beta-D-Glucan Linkages
-
Copa-Patino JL, Broda P, (1994) A Phanerochaete-Chrysosporium Beta-D-Glucosidase/Beta-D-Xylosidase with Specificity for (1-]3)-Beta-D-Glucan Linkages. Carbohydrate Research 253: 265-275.
-
(1994)
Carbohydrate Research
, vol.253
, pp. 265-275
-
-
Copa-Patino, J.L.1
Broda, P.2
-
55
-
-
0037041053
-
A beta-glucosidase/xylosidase from the phytopathogenic oomycete, Phytophthora infestans
-
Brunner F, Wirtz W, Rose JKC, Darvill AG, Govers F, et al. (2002) A beta-glucosidase/xylosidase from the phytopathogenic oomycete, Phytophthora infestans. Phytochemistry 59: 689-696.
-
(2002)
Phytochemistry
, vol.59
, pp. 689-696
-
-
Brunner, F.1
Wirtz, W.2
Rose, J.K.C.3
Darvill, A.G.4
Govers, F.5
-
56
-
-
33845985596
-
Degradation of cellulose and hemicelluloses by the brown rot fungus Piptoporus betulinus - production of extracellular enzymes and characterization of the major cellulases
-
Valaskova V, Baldrian P, (2006) Degradation of cellulose and hemicelluloses by the brown rot fungus Piptoporus betulinus- production of extracellular enzymes and characterization of the major cellulases. Microbiology-Sgm 152: 3613-3622.
-
(2006)
Microbiology-Sgm
, vol.152
, pp. 3613-3622
-
-
Valaskova, V.1
Baldrian, P.2
-
57
-
-
33947405295
-
Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium
-
Nijikken Y, Tsukada T, Igarashi K, Samejima M, Wakagi T, et al. (2007) Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium. Febs Letters 581: 1514-1520.
-
(2007)
Febs Letters
, vol.581
, pp. 1514-1520
-
-
Nijikken, Y.1
Tsukada, T.2
Igarashi, K.3
Samejima, M.4
Wakagi, T.5
-
58
-
-
84864582821
-
Substrate-specific transcription of the enigmatic GH61 family of the pathogenic white-rot fungus Heterobasidion irregulare during growth on lignocellulose
-
Yakovlev I, Vaaje-Kolstad G, Hietala AM, Stefanczyk E, Solheim H, et al. (2012) Substrate-specific transcription of the enigmatic GH61 family of the pathogenic white-rot fungus Heterobasidion irregulare during growth on lignocellulose. Applied microbiology and biotechnology 95: 979-990.
-
(2012)
Applied Microbiology and Biotechnology
, vol.95
, pp. 979-990
-
-
Yakovlev, I.1
Vaaje-Kolstad, G.2
Hietala, A.M.3
Stefanczyk, E.4
Solheim, H.5
-
59
-
-
77957727454
-
An oxidative enzyme boosting the enzymatic conversion of recalcitrant polysaccharides
-
Vaaje-Kolstad G, Westereng B, Horn SJ, Liu Z, Zhai H, et al. (2010) An oxidative enzyme boosting the enzymatic conversion of recalcitrant polysaccharides. Science 330: 219-222.
-
(2010)
Science
, vol.330
, pp. 219-222
-
-
Vaaje-Kolstad, G.1
Westereng, B.2
Horn, S.J.3
Liu, Z.4
Zhai, H.5
-
60
-
-
0027794178
-
Fungal Colonization of Glyphosate-Treated Seedlings Using a New Root Plating Technique
-
Lévesque CA, Rahe JE, Eaves DM, (1993) Fungal Colonization of Glyphosate-Treated Seedlings Using a New Root Plating Technique. Mycological Research 97: 299-306.
-
(1993)
Mycological Research
, vol.97
, pp. 299-306
-
-
Lévesque, C.A.1
Rahe, J.E.2
Eaves, D.M.3
-
61
-
-
0000880707
-
Effects of Temperature on Pythium Root-Rot of Spinach Grown under Hydroponic Conditions
-
Gold SE, Stanghellini ME, (1985) Effects of Temperature on Pythium Root-Rot of Spinach Grown under Hydroponic Conditions. Phytopathology 75: 333-337.
-
(1985)
Phytopathology
, vol.75
, pp. 333-337
-
-
Gold, S.E.1
Stanghellini, M.E.2
-
62
-
-
29444436392
-
Loss of pectin is an early event during infection of cocoyam roots by Pythium myriotylum
-
Boudjeko T, Andeme-Onzighi C, Vicre M, Balange AP, Ndoumou DO, et al. (2006) Loss of pectin is an early event during infection of cocoyam roots by Pythium myriotylum. Planta 223: 271-282.
-
(2006)
Planta
, vol.223
, pp. 271-282
-
-
Boudjeko, T.1
Andeme-Onzighi, C.2
Vicre, M.3
Balange, A.P.4
Ndoumou, D.O.5
-
63
-
-
0035199524
-
Aspergillus enzymes involved in degradation of plant cell wall polysaccharides
-
de Vries RP, Visser J, (2001) Aspergillus enzymes involved in degradation of plant cell wall polysaccharides. Microbiology and Molecular Biology Reviews 65: 497-+.
-
(2001)
Microbiology and Molecular Biology Reviews
, vol.65
, pp. 497
-
-
de Vries, R.P.1
Visser, J.2
-
64
-
-
33747872453
-
Gene duplication event in family 12 glycosyl hydrolase from Phytophthora spp
-
Costanzo S, Ospina-Giraldo MD, Deahl KL, Baker CJ, Jones RW, (2006) Gene duplication event in family 12 glycosyl hydrolase from Phytophthora spp. Fungal Genetics and Biology 43: 707-714.
-
(2006)
Fungal Genetics and Biology
, vol.43
, pp. 707-714
-
-
Costanzo, S.1
Ospina-Giraldo, M.D.2
Deahl, K.L.3
Baker, C.J.4
Jones, R.W.5
-
65
-
-
33646168883
-
Structural elements to convert Escherichia coli alpha-xylosidase (YicI) into alpha-glucosidase
-
Okuyama M, Kaneko A, Mori H, Chiba S, Kimura A, (2006) Structural elements to convert Escherichia coli alpha-xylosidase (YicI) into alpha-glucosidase. Febs Letters 580: 2707-2711.
-
(2006)
Febs Letters
, vol.580
, pp. 2707-2711
-
-
Okuyama, M.1
Kaneko, A.2
Mori, H.3
Chiba, S.4
Kimura, A.5
-
66
-
-
79957714498
-
Structural and enzymatic characterization of a glycoside hydrolase family 31 alpha-xylosidase from Cellvibrio japonicus involved in xyloglucan saccharification
-
Larsbrink J, Izumi A, Ibatullin FM, Nakhai A, Gilbert HJ, et al. (2011) Structural and enzymatic characterization of a glycoside hydrolase family 31 alpha-xylosidase from Cellvibrio japonicus involved in xyloglucan saccharification. The Biochemical journal 436: 567-580.
-
(2011)
The Biochemical Journal
, vol.436
, pp. 567-580
-
-
Larsbrink, J.1
Izumi, A.2
Ibatullin, F.M.3
Nakhai, A.4
Gilbert, H.J.5
-
67
-
-
38849122120
-
Spruce-derived mannans - A potential raw material for hydrocolloids and novel advanced natural materials
-
Willfor S, Sundberg K, Tenkanen M, Holmbom B, (2008) Spruce-derived mannans- A potential raw material for hydrocolloids and novel advanced natural materials. Carbohydrate Polymers 72: 197-210.
-
(2008)
Carbohydrate Polymers
, vol.72
, pp. 197-210
-
-
Willfor, S.1
Sundberg, K.2
Tenkanen, M.3
Holmbom, B.4
-
68
-
-
0034819282
-
Cloning and characterization of Aspergillus niger genes encoding an alpha-galactosidase and a beta-mannosidase involved in galactomannan degradation
-
Ademark P, de Vries RP, Hagglund P, Stalbrand H, Visser J, (2001) Cloning and characterization of Aspergillus niger genes encoding an alpha-galactosidase and a beta-mannosidase involved in galactomannan degradation. European journal of biochemistry/FEBS 268: 2982-2990.
-
(2001)
European Journal of Biochemistry/FEBS
, vol.268
, pp. 2982-2990
-
-
Ademark, P.1
de Vries, R.P.2
Hagglund, P.3
Stalbrand, H.4
Visser, J.5
-
69
-
-
75649143355
-
Cloning, expression in Pichia pastoris, and characterization of a thermostable GH5 mannan endo-1,4-beta-mannosidase from Aspergillus niger BK01
-
Do BC, Dang TT, Berrin JG, Haltrich D, To KA, et al. (2009) Cloning, expression in Pichia pastoris, and characterization of a thermostable GH5 mannan endo-1,4-beta-mannosidase from Aspergillus niger BK01. Microbial cell factories 8: 59.
-
(2009)
Microbial Cell Factories
, vol.8
, pp. 59
-
-
Do, B.C.1
Dang, T.T.2
Berrin, J.G.3
Haltrich, D.4
To, K.A.5
-
70
-
-
0003998303
-
Compendium of bean diseases: St. Paul
-
Hall R, (1991) Compendium of bean diseases: St. Paul.
-
(1991)
-
-
Hall, R.1
-
76
-
-
0036010552
-
The pipg1 gene of the oomycete Phytophthora infestans encodes a fungal-like endopolygalacturonase
-
Torto TA, Rauser L, Kamoun S, (2002) The pipg1 gene of the oomycete Phytophthora infestans encodes a fungal-like endopolygalacturonase. Current genetics 40: 385-390.
-
(2002)
Current Genetics
, vol.40
, pp. 385-390
-
-
Torto, T.A.1
Rauser, L.2
Kamoun, S.3
-
77
-
-
42049112356
-
Functional characterization of a gene family encoding Polygalacturonases in Phytophthora parasitica
-
Wu CH, Yan HZ, Liu LF, Liou RF, (2008) Functional characterization of a gene family encoding Polygalacturonases in Phytophthora parasitica. Molecular plant-microbe interactions: MPMI 21: 480-489.
-
(2008)
Molecular Plant-Microbe Interactions: MPMI
, vol.21
, pp. 480-489
-
-
Wu, C.H.1
Yan, H.Z.2
Liu, L.F.3
Liou, R.F.4
-
79
-
-
0011353178
-
Variation in Cutinase, Esterase, and Chromosome Patterns in Nop Mutants of a Transformed Pathogenic Strain of Phytophthora-Capsici
-
Mena GL, Munoz CI, Guzman PA, Bailey AM, (1994) Variation in Cutinase, Esterase, and Chromosome Patterns in Nop Mutants of a Transformed Pathogenic Strain of Phytophthora-Capsici. Phytopathology 84: 502-508.
-
(1994)
Phytopathology
, vol.84
, pp. 502-508
-
-
Mena, G.L.1
Munoz, C.I.2
Guzman, P.A.3
Bailey, A.M.4
-
80
-
-
0031942229
-
A cutinase-encoding gene from Phytophthora capsici isolated by differential display RT-PCR
-
Munoz CI, Bailey AM, (1998) A cutinase-encoding gene from Phytophthora capsici isolated by differential display RT-PCR. Current Genetics 33: 225-230.
-
(1998)
Current Genetics
, vol.33
, pp. 225-230
-
-
Munoz, C.I.1
Bailey, A.M.2
-
81
-
-
33751582556
-
Comparative analysis of Phytophthora genes encoding secreted proteins reveals conserved synteny and lineage-specific gene duplications and deletions
-
Jiang RH, Tyler BM, Govers F, (2006) Comparative analysis of Phytophthora genes encoding secreted proteins reveals conserved synteny and lineage-specific gene duplications and deletions. Molecular plant-microbe interactions: MPMI 19: 1311-1321.
-
(2006)
Molecular Plant-Microbe Interactions: MPMI
, vol.19
, pp. 1311-1321
-
-
Jiang, R.H.1
Tyler, B.M.2
Govers, F.3
-
82
-
-
0000381029
-
Cutin Degradation by Plant Pathogenic Fungi
-
Baker CJ, Bateman DF, (1978) Cutin Degradation by Plant Pathogenic Fungi. Phytopathology 68: 1577-1584.
-
(1978)
Phytopathology
, vol.68
, pp. 1577-1584
-
-
Baker, C.J.1
Bateman, D.F.2
-
83
-
-
78649319269
-
Structural and functional profile of the carbohydrate esterase gene complement in Phytophthora infestans
-
Ospina-Giraldo MD, McWalters J, Seyer L, (2010) Structural and functional profile of the carbohydrate esterase gene complement in Phytophthora infestans. Current genetics 56: 495-506.
-
(2010)
Current Genetics
, vol.56
, pp. 495-506
-
-
Ospina-Giraldo, M.D.1
McWalters, J.2
Seyer, L.3
-
86
-
-
0027415305
-
Occurrence of Cellulose and Chitin in the Hyphal Walls of Pythium-Ultimum - a Comparative-Study with Other Plant Pathogenic Fungi
-
Cherif M, Benhamou N, Belanger RR, (1993) Occurrence of Cellulose and Chitin in the Hyphal Walls of Pythium-Ultimum- a Comparative-Study with Other Plant Pathogenic Fungi. Canadian Journal of Microbiology 39: 213-222.
-
(1993)
Canadian Journal of Microbiology
, vol.39
, pp. 213-222
-
-
Cherif, M.1
Benhamou, N.2
Belanger, R.R.3
-
87
-
-
78751647987
-
Biology of callose (beta-1,3-glucan) turnover at plasmodesmata
-
Zavaliev R, Ueki S, Epel BL, Citovsky V, (2011) Biology of callose (beta-1,3-glucan) turnover at plasmodesmata. Protoplasma 248: 117-130.
-
(2011)
Protoplasma
, vol.248
, pp. 117-130
-
-
Zavaliev, R.1
Ueki, S.2
Epel, B.L.3
Citovsky, V.4
-
89
-
-
0003776552
-
-
St. Paul, Minn.: American Phytopathological Society
-
Erwin DC, Bartnicki-Garcia S, Tsao PH (1983) Phytophthora: its biology, taxonomy, ecology, and pathology. St. Paul, Minn.: American Phytopathological Society.
-
(1983)
Phytophthora: Its biology, taxonomy, ecology, and pathology
-
-
Erwin, D.C.1
Bartnicki-Garcia, S.2
Tsao, P.H.3
-
90
-
-
78049264854
-
Consolidation of glycosyl hydrolase family 30: A dual domain 4/7 hydrolase family consisting of two structurally distinct groups
-
St John FJ, Gonzalez JM, Pozharski E, (2010) Consolidation of glycosyl hydrolase family 30: A dual domain 4/7 hydrolase family consisting of two structurally distinct groups. Febs Letters 584: 4435-4441.
-
(2010)
Febs Letters
, vol.584
, pp. 4435-4441
-
-
St John, F.J.1
Gonzalez, J.M.2
Pozharski, E.3
-
91
-
-
84861182813
-
Genome evolution in filamentous plant pathogens: why bigger can be better
-
Raffaele S, Kamoun S, (2012) Genome evolution in filamentous plant pathogens: why bigger can be better. Nature reviews Microbiology 10: 417-430.
-
(2012)
Nature Reviews Microbiology
, vol.10
, pp. 417-430
-
-
Raffaele, S.1
Kamoun, S.2
-
93
-
-
3242778753
-
A new black Aspergillus species, A. vadensis, is a promising host for homologous and heterologous protein production
-
de Vries RP, Burgers K, van de Vondervoort PJ, Frisvad JC, Samson RA, et al. (2004) A new black Aspergillus species, A. vadensis, is a promising host for homologous and heterologous protein production. Applied and environmental microbiology 70: 3954-3959.
-
(2004)
Applied and Environmental Microbiology
, vol.70
, pp. 3954-3959
-
-
de Vries, R.P.1
Burgers, K.2
van de Vondervoort, P.J.3
Frisvad, J.C.4
Samson, R.A.5
-
94
-
-
33644876239
-
VMD: a community annotation database for oomycetes and microbial genomes
-
Tripathy S, Pandey VN, Fang B, Salas F, Tyler BM, (2006) VMD: a community annotation database for oomycetes and microbial genomes. Nucleic acids research 34: D379-381.
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Tripathy, S.1
Pandey, V.N.2
Fang, B.3
Salas, F.4
Tyler, B.M.5
-
95
-
-
75549090603
-
The Pfam protein families database
-
Finn RD, Mistry J, Tate J, Coggill P, Heger A, et al. (2010) The Pfam protein families database. Nucleic acids research 38: D211-222.
-
(2010)
Nucleic Acids Research
, vol.38
-
-
Finn, R.D.1
Mistry, J.2
Tate, J.3
Coggill, P.4
Heger, A.5
-
96
-
-
80053345905
-
SignalP 4.0: discriminating signal peptides from transmembrane regions
-
Petersen TN, Brunak S, von Heijne G, Nielsen H, (2011) SignalP 4.0: discriminating signal peptides from transmembrane regions. Nature methods 8: 785-786.
-
(2011)
Nature Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
von Heijne, G.3
Nielsen, H.4
-
97
-
-
18744414791
-
Identification of GPI anchor attachment signals by a Kohonen self-organizing map
-
Fankhauser N, Maser P, (2005) Identification of GPI anchor attachment signals by a Kohonen self-organizing map. Bioinformatics 21: 1846-1852.
-
(2005)
Bioinformatics
, vol.21
, pp. 1846-1852
-
-
Fankhauser, N.1
Maser, P.2
-
98
-
-
29144483361
-
An HMM posterior decoder for sequence feature prediction that includes homology information
-
Kall L, Krogh A, Sonnhammer EL, (2005) An HMM posterior decoder for sequence feature prediction that includes homology information. Bioinformatics 21 Suppl 1: i251-257.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL.
-
-
Kall, L.1
Krogh, A.2
Sonnhammer, E.L.3
-
99
-
-
23144458473
-
InterProScan: protein domains identifier
-
Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, et al. (2005) InterProScan: protein domains identifier. Nucleic acids research 33: W116-120.
-
(2005)
Nucleic Acids Research
, vol.33
-
-
Quevillon, E.1
Silventoinen, V.2
Pillai, S.3
Harte, N.4
Mulder, N.5
-
101
-
-
6044252163
-
The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism
-
Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, et al. (2004) The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science 306: 79-86.
-
(2004)
Science
, vol.306
, pp. 79-86
-
-
Armbrust, E.V.1
Berges, J.A.2
Bowler, C.3
Green, B.R.4
Martinez, D.5
-
102
-
-
56249098614
-
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
-
Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, et al. (2008) The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456: 239-244.
-
(2008)
Nature
, vol.456
, pp. 239-244
-
-
Bowler, C.1
Allen, A.E.2
Badger, J.H.3
Grimwood, J.4
Jabbari, K.5
-
103
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
-
104
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular biology and evolution 28: 2731-2739.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
-
105
-
-
0034849408
-
MrBayes: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F, (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
106
-
-
33845873289
-
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
-
Letunic I, Bork P, (2007) Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 23: 127-128.
-
(2007)
Bioinformatics
, vol.23
, pp. 127-128
-
-
Letunic, I.1
Bork, P.2
|