-
1
-
-
84865284824
-
Respiratory viral infections: Knowledge based therapeutics
-
Hussell, T., Godlee, A., Salek-Ardakani, S. & Snelgrove, R. J. Respiratory viral infections: knowledge based therapeutics. Curr. Opin Immunol. 24, 438-443 (2012).
-
(2012)
Curr. Opin Immunol.
, vol.24
, pp. 438-443
-
-
Hussell, T.1
Godlee, A.2
Salek-Ardakani, S.3
Snelgrove, R.J.4
-
2
-
-
0842327826
-
National disease burden of respiratory viruses detected in children by polymerase chain reaction
-
Henrickson, K. J., Hoover, S., Kehl, K. S. & Hua, W. National disease burden of respiratory viruses detected in children by polymerase chain reaction. Pediatr Infect Dis J. 23, S11-8 (2004).
-
(2004)
Pediatr Infect Dis J.
, vol.23
-
-
Henrickson, K.J.1
Hoover, S.2
Kehl, K.S.3
Hua, W.4
-
3
-
-
0037396962
-
Parainfluenza viruses
-
Henrickson, K. J. Parainfluenza Viruses. Clin Microbiol Rev. 16, 242-264 (2003).
-
(2003)
Clin Microbiol Rev.
, vol.16
, pp. 242-264
-
-
Henrickson, K.J.1
-
4
-
-
24744440562
-
Human parainfluenza virus 4 outbreak and the role of diagnostic tests
-
Lau, S. & To, W. Human parainfluenza virus 4 outbreak and the role of diagnostic tests. J Clin Microbiol. 43, 4515-4521 (2005).
-
(2005)
J Clin Microbiol.
, vol.43
, pp. 4515-4521
-
-
Lau, S.1
To, W.2
-
5
-
-
0002024856
-
Studies of a new haemadsorption virus.1. Isolation, properties and characterization
-
Johnson, K. M., Chanock, R. M., Cook, M. K. & Huebner, R. J. Studies of a new haemadsorption virus.1. Isolation, properties and characterization. Am J Hyg. 71, 81 (1960).
-
(1960)
Am J Hyg.
, vol.71
, pp. 81
-
-
Johnson, K.M.1
Chanock, R.M.2
Cook, M.K.3
Huebner, R.J.4
-
6
-
-
0001727175
-
Antigenic variation among newly isolated strains of parainfluenza type 4 virus
-
Canchola, J. G., Vargosko, A. J. & Kim, H. W. Antigenic variation among newly isolated strains of parainfluenza type 4 virus. Am J Hyg. 79, 357-364 (1964).
-
(1964)
Am J Hyg.
, vol.79
, pp. 357-364
-
-
Canchola, J.G.1
Vargosko, A.J.2
Kim, H.W.3
-
7
-
-
0014575690
-
The isolation of parainfluenza 4 subtypes A and B in England and serological studies of their prevalence
-
Gardner, S. D. The isolation of parainfluenza 4 subtypes A and B in England and serological studies of their prevalence. J Hyg. 67, 545-50 (1969).
-
(1969)
J Hyg.
, vol.67
, pp. 545-550
-
-
Gardner, S.D.1
-
8
-
-
79960638009
-
A prospective study of parainfluenza virus type 4 infections in children attending daycare
-
Fairchok, M. P., Martin, E. T., Kuypers, J. & Englund, J. a. A prospective study of parainfluenza virus type 4 infections in children attending daycare. Pediatr Infect Dis J. 30, 714-6 (2011).
-
(2011)
Pediatr Infect Dis J.
, vol.30
, pp. 714-716
-
-
Fairchok, M.P.1
Martin, E.T.2
Kuypers, J.3
Englund, J.A.4
-
9
-
-
0027375916
-
Infections due to parainfluenza virus type 4 in children
-
Rubin, E. Infections due to parainfluenza virus type 4 in children. Clin Infect Dis. 17, 998-1002 (1993).
-
(1993)
Clin Infect Dis.
, vol.17
, pp. 998-1002
-
-
Rubin, E.1
-
10
-
-
0031040972
-
Parainfluenza virus type 4 in pediatric patients
-
Lindquist, S. W.,Darnule, A., Istas, A. &Demmler, G. J. Parainfluenza virus type 4 in pediatric patients. Pediatr Infect Dis J. 16, 34-38 (1997).
-
(1997)
Pediatr Infect Dis J.
, vol.16
, pp. 34-38
-
-
Lindquist, S.W.1
Darnule, A.2
Istas, A.3
Demmler, G.J.4
-
11
-
-
66149139314
-
Clinical and molecular epidemiology of human parainfluenza virus 4 infections in Hong Kong: Subtype 4B as common as subtype 4A
-
Lau, S. K. P. et al. Clinical and molecular epidemiology of human parainfluenza virus 4 infections in Hong Kong: subtype 4B as common as subtype 4A. J Clin Microbiol. 47, 1549-52 (2009).
-
(2009)
J Clin Microbiol.
, vol.47
, pp. 1549-1552
-
-
Lau, S.K.P.1
-
12
-
-
34250691592
-
Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult
-
Chiu, C. Y. et al. Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult. Clin infect Dis. 43, e71-6 (2006).
-
(2006)
Clin Infect Dis.
, vol.43
-
-
Chiu, C.Y.1
-
13
-
-
79959317531
-
Human parainfluenza virus type 4 infection in Chinese children with lower respiratory tract infections: A comparison study
-
Ren, L. et al. Human parainfluenza virus type 4 infection in Chinese children with lower respiratory tract infections: a comparison study. J Clin Virol. 51, 209-12 (2011).
-
(2011)
J Clin Virol.
, vol.51
, pp. 209-212
-
-
Ren, L.1
-
14
-
-
84872534732
-
Epidemiology and clinical presentation of the four human parainfluenza virus types
-
Liu, W.-K. et al. Epidemiology and clinical presentation of the four human parainfluenza virus types. BMC Infect Dis. 13, 28 (2013).
-
(2013)
BMC Infect Dis.
, vol.13
, pp. 28
-
-
Liu, W.-K.1
-
15
-
-
0342680132
-
Detection and identification of human parainfluenza viruses 1, 2, 3, and 4 in clinical samples of pediatric patients by multiplex reverse transcription-PCR
-
Aguilar, J. C. et al. Detection and identification of human parainfluenza viruses 1, 2, 3, and 4 in clinical samples of pediatric patients by multiplex reverse transcription-PCR. J Clin Microbiol. 38, 1191-5 (2000).
-
(2000)
J Clin Microbiol.
, vol.38
, pp. 1191-1195
-
-
Aguilar, J.C.1
-
16
-
-
33750547086
-
Human parainfluenza Type 4 infection Canada
-
Vachon, M. et al. Human Parainfluenza Type 4 Infection, Canada. Emerg Infect Diseases. 12, 1755-1758 (2006).
-
(2006)
Emerg Infect Diseases.
, vol.12
, pp. 1755-1758
-
-
Vachon, M.1
-
17
-
-
40949093195
-
Viral etiology of acute respiratory infections with cough in infancy: A community-based birth cohort study
-
Regamey, N. et al. Viral etiology of acute respiratory infections with cough in infancy: A community-based birth cohort study. Pediatr Infect Dis J. 27, 100-105 (2008).
-
(2008)
Pediatr Infect Dis J.
, vol.27
, pp. 100-105
-
-
Regamey, N.1
-
18
-
-
66149101252
-
Metagenomic analyses of viruses in stool samples from children with acute flaccid paralysis
-
Victoria, J. G. et al. Metagenomic analyses of viruses in stool samples from children with acute flaccid paralysis. J Virol. 83, 4642-51 (2009).
-
(2009)
J Virol.
, vol.83
, pp. 4642-4651
-
-
Victoria, J.G.1
-
19
-
-
83755186199
-
A Viral discovery methodology for clinical biopsy samples utilising massively parallel next generation sequencing
-
Daly, G. M. et al. A Viral discovery methodology for clinical biopsy samples utilising massively parallel next generation sequencing. PLoS One. 6, e28879 (2011).
-
(2011)
PLoS One.
, vol.6
-
-
Daly, G.M.1
-
20
-
-
78650794001
-
The complete sequence of a human parainfluenzavirus 4 genome
-
Yea, C. et al. The complete sequence of a human parainfluenzavirus 4 genome. Viruses. 1, 26-41 (2009).
-
(2009)
Viruses.
, vol.1
, pp. 26-41
-
-
Yea, C.1
-
21
-
-
78650791936
-
Completion of the full-length genome sequence of human parainfluenza virus types 4A and 4B: Sequence analysis of the large protein genes and gene start, intergenic and end sequences
-
Komada, H. et al. Completion of the full-length genome sequence of human parainfluenza virus types 4A and 4B: sequence analysis of the large protein genes and gene start, intergenic and end sequences. Arch Virol. 156, 161-6 (2011).
-
(2011)
Arch Virol.
, vol.156
, pp. 161-166
-
-
Komada, H.1
-
22
-
-
84880512018
-
Comparative analysis of the full-length genome sequence of a clinical isolate of human parainfluenza virus 4B
-
Lednicky, J., Waltzek, T., Halpern,M. & Hamilton, S. Comparative analysis of the full-length genome sequence of a clinical isolate of human parainfluenza virus 4B. Scientifica. 4-7 (2012).
-
(2012)
Scientifica.
, pp. 4-7
-
-
Lednicky, J.1
Waltzek, T.2
Halpern, M.3
Hamilton, S.4
-
23
-
-
72149103786
-
Reassessing conflicting evolutionary histories of the Paramyxoviridae and the origins of respiroviruses with Bayesian multigene phylogenies
-
McCarthy, A. J. & Goodman, S. J. Reassessing conflicting evolutionary histories of the Paramyxoviridae and the origins of respiroviruses with Bayesian multigene phylogenies. Infect Genet Evol. 10, 97-107 (2010).
-
(2010)
Infect Genet Evol.
, vol.10
, pp. 97-107
-
-
McCarthy, A.J.1
Goodman, S.J.2
-
24
-
-
84870356749
-
-
(Zuckerman, A., Banatvala, J., Schoub, B., Griffiths, P. & Mortimer, P.) John Wiley & Sons Ltd
-
Psarras, S., Papadopoulos, N. G. & Johnston, S. L. Parainfluenza Viruses. Principles and Practice of Clinical Virology (Zuckerman, A., Banatvala, J., Schoub, B., Griffiths, P. & Mortimer, P.) 409-439 (John Wiley & Sons Ltd., 2005).
-
(2005)
Parainfluenza Viruses. Principles and Practice of Clinical Virology
, pp. 409-439
-
-
Psarras, S.1
Papadopoulos, N.G.2
Johnston, S.L.3
-
25
-
-
0031883549
-
Paramyxovirus RNA synthesis and the requirement for hexamer genome length: The rule of six revisited
-
Kolakofsky, D., Pelet, T., Garcin, D., Curran, J. & Roux, L. Paramyxovirus RNA synthesis and the requirement for hexamer genome length: the rule of six revisited. J Virol. 72, 891-899 (1998).
-
(1998)
J Virol.
, vol.72
, pp. 891-899
-
-
Kolakofsky, D.1
Pelet, T.2
Garcin, D.3
Curran, J.4
Roux, L.5
-
26
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Last accessed 6th June 2012
-
Zuker, M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31, 3406-3415 (2003). Last accessed 6th June 2012.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
27
-
-
0033765362
-
Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs
-
Rivas, E. & Eddy, S. Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs. Bioinformatics. 16, 583-605 (2000).
-
(2000)
Bioinformatics.
, vol.16
, pp. 583-605
-
-
Rivas, E.1
Eddy, S.2
-
28
-
-
33745612985
-
STRAL: Progressive alignment of noncoding RNA using base pairing probability vectors in quadratic time
-
Dalli, D., Wilm, A., Mainz, I. & Steger, G. STRAL: progressive alignment of noncoding RNA using base pairing probability vectors in quadratic time. Bioinformatics. 22, 1593-9 (2006).
-
(2006)
Bioinformatics.
, vol.22
, pp. 1593-1599
-
-
Dalli, D.1
Wilm, A.2
Mainz, I.3
Steger, G.4
-
29
-
-
56649099274
-
Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments
-
Seemann, S. E., Gorodkin, J. & Backofen, R. Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments. Nucleic Acids Res. 36, 6355-62 (2008).
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 6355-6362
-
-
Seemann, S.E.1
Gorodkin, J.2
Backofen, R.3
-
31
-
-
82055164092
-
ViennaRNA Package 2.0
-
Lorenz, R. et al. ViennaRNA Package 2.0. AMB. 6, 1-14 (2011).
-
(2011)
AMB
, vol.6
, pp. 1-14
-
-
Lorenz, R.1
-
32
-
-
0033762350
-
Crystal structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase
-
Crennell, S., Takimoto, T., Portner, a. & Taylor, G. Crystal structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase. Nature Struct Biol. 7, 1068-74 (2000).
-
(2000)
Nature Struct Biol.
, vol.7
, pp. 1068-1074
-
-
Crennell, S.1
Takimoto, T.2
Portner, A.3
Taylor, G.4
-
33
-
-
0346654073
-
Structure of the haemagglutinin-neuraminidase from human parainfluenza virus type III
-
Lawrence, M. C. et al. Structure of the haemagglutinin-neuraminidase from human parainfluenza virus type III. J Mol Biol. 335, 1343-1357 (2004).
-
(2004)
J Mol Biol.
, vol.335
, pp. 1343-1357
-
-
Lawrence, M.C.1
-
34
-
-
23744511958
-
Human parainfluenza virus type 4 infections: A report of 20 cases from 1998 to 2002
-
Billaud, G. et al. Human parainfluenza virus type 4 infections: a report of 20 cases from 1998 to 2002. J Clin Virol. 34, 48-51 (2005).
-
(2005)
J Clin Virol.
, vol.34
, pp. 48-51
-
-
Billaud, G.1
-
35
-
-
33750322881
-
Seasonal trends of human parainfluenza viral infections: United States 1990-2004
-
Fry, A. & Curns, A. Seasonal trends of human parainfluenza viral infections: United States, 1990-2004. Clin Infect Dis. 43, 1016-1022 (2006).
-
(2006)
Clin Infect Dis.
, vol.43
, pp. 1016-1022
-
-
Fry, A.1
Curns, A.2
-
36
-
-
0025191917
-
Leader sequence distinguishes between translatable and encapsidated measles virus RNAs
-
Castaneda, S. J. &Wong, T. C. Leader sequence distinguishes between translatable and encapsidated measles virus RNAs. J Virol. 64, 222-30 (1990).
-
(1990)
J Virol.
, vol.64
, pp. 222-230
-
-
Castaneda, S.J.1
Wong, T.C.2
-
37
-
-
0027291943
-
The rule of six, a basic feature for efficient replication of Sendai virus defective interfering RNA
-
Calain, P. & Roux, L. The rule of six, a basic feature for efficient replication of Sendai virus defective interfering RNA. J Virol. 67, 4822-30 (1993).
-
(1993)
J Virol.
, vol.67
, pp. 4822-4830
-
-
Calain, P.1
Roux, L.2
-
38
-
-
84860234644
-
Paramyxovirus fusion and entry: Multiple paths to a common end
-
Chang, A. & Dutch, R. E. Paramyxovirus fusion and entry: multiple paths to a common end. Viruses. 4, 613-36 (2012).
-
(2012)
Viruses.
, vol.4
, pp. 613-636
-
-
Chang, A.1
Dutch, R.E.2
-
39
-
-
0036891868
-
Role of the hemagglutinin-neuraminidase protein in the mechanism of paramyxovirus-cell membrane fusion
-
Takimoto, T., Taylor, G., Connaris, H., Crennell, S. & Portner, A. Role of the hemagglutinin-neuraminidase protein in the mechanism of paramyxovirus-cell membrane fusion. J Virol. 76, 13028-13033 (2002).
-
(2002)
J Virol.
, vol.76
, pp. 13028-13033
-
-
Takimoto, T.1
Taylor, G.2
Connaris, H.3
Crennell, S.4
Portner, A.5
-
40
-
-
0345390961
-
Pulmonary enterovirus infections in stem cell transplant recipients
-
Gonzalez, Y. et al. Pulmonary enterovirus infections in stem cell transplant recipients. Bone Marrow Transplant. 23, 511-513 (1999).
-
(1999)
Bone Marrow Transplant.
, vol.23
, pp. 511-513
-
-
Gonzalez, Y.1
-
41
-
-
0035092526
-
Detection and subtyping (H5 and H7) of avian type A influenza virus by reverse transcription-PCR and PCR-ELISA
-
Munch, M., Nielsen, L. P., Handberg, K. J. & Jørgensen, P. H. Detection and subtyping (H5 and H7) of avian type A influenza virus by reverse transcription-PCR and PCR-ELISA. Arch Virol. 146, 87-97 (2001).
-
(2001)
Arch Virol.
, vol.146
, pp. 87-97
-
-
Munch, M.1
Nielsen, L.P.2
Handberg, K.J.3
Jørgensen, P.H.4
-
42
-
-
27644504060
-
Few but severe viral infections in children with cancer: A prospective RT-PCR and PCR-based 12-month study
-
Christensen, M. S., Nielsen, L. P. & Hasle, H. Few but severe viral infections in children with cancer: a prospective RT-PCR and PCR-based 12-month study. Pediatr Blood Cancer. 45, 945-51 (2005).
-
(2005)
Pediatr Blood Cancer.
, vol.45
, pp. 945-951
-
-
Christensen, M.S.1
Nielsen, L.P.2
Hasle, H.3
-
43
-
-
58149488674
-
A highly prevalent and genetically diversified Picornaviridae genus in south Asian children
-
Kapoor, A. et al. A highly prevalent and genetically diversified Picornaviridae genus in south Asian children. Proc Natl Acad Sci USA. 105, 20482-7 (2008).
-
(2008)
Proc Natl Acad Sci USA.
, vol.105
, pp. 20482-20487
-
-
Kapoor, A.1
-
44
-
-
0034764307
-
SSAHA: A fast search method for large DNA databases
-
Ning, Z., Cox, a. J. & Mullikin, J. C. SSAHA: a fast search method for large DNA databases. Genome Res. 11, 1725-9 (2001).
-
(2001)
Genome Res.
, vol.11
, pp. 1725-1729
-
-
Ning, Z.1
Cox, A.J.2
Mullikin, J.C.3
-
45
-
-
80052150179
-
Origins of the E coli Strain causing an outbreak of hemolytic-uremic syndrome in Germany
-
Rasko, D. et al. Origins of the E. coli Strain causing an outbreak of hemolytic-uremic syndrome in Germany. N Engl J Med. 365, 709-717 (2012).
-
(2012)
N Engl J Med.
, vol.365
, pp. 709-717
-
-
Rasko, D.1
-
46
-
-
79958043657
-
-
Last accessed 31st August 2012
-
Drummond, A. J. et al. Geneious v5.5, Available from http://www.geneious. com. Last accessed 31st August 2012 (2010).
-
(2010)
Geneious v5.5
-
-
Drummond, A.J.1
-
47
-
-
0033990048
-
Primer3 on the WWW for General Users and for Biologists programmers
-
(Misener, S. & Krawetz, S. A.) Humana Press Inc. Last accessed 31st August 2012
-
Rozen, S. & Skaletsky, H. Primer3 on the WWW for General Users and for Biologists programmers. Bioinformatics methods and protocols (Misener, S. & Krawetz, S. A.) 132, 365-386. (Humana Press Inc., 1999). Last accessed 31st August 2012.
-
(1999)
Bioinformatics Methods and Protocols
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
48
-
-
68549104404
-
The sequence alignment/Map format and SAMtools
-
Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 25, 2078-9 (2009).
-
(2009)
Bioinformatics.
, vol.25
, pp. 2078-2079
-
-
Li, H.1
-
49
-
-
0037100671
-
{MAFFT}: A novel method for rapid multiple sequence alignment based on fast {Fourier} transform
-
Katoh, K.,Misawa, K., Kuma, K. &Miyata, T. {MAFFT}: a novel method for rapid multiple sequence alignment based on fast {Fourier} transform. Nucleic Acids Res. 30, 3059-3066 (2002).
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
50
-
-
0034848170
-
DAMBE: Software package for data analysis in molecular biology and evolution
-
Xia, X. & Xie, Z. DAMBE: Software package for data analysis in molecular biology and evolution. J Hered. 371-373 (2001).
-
(2001)
J Hered.
, pp. 371-373
-
-
Xia, X.1
Xie, Z.2
-
51
-
-
33645816587
-
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane, T. M., Creevey, C. J., Pentony, M. M., Naughton, T. J. & Mclnerney, J. O. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol. 6, 29 (2006).
-
(2006)
BMC Evol Biol.
, vol.6
, pp. 29
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
Naughton, T.J.4
McLnerney, J.O.5
-
52
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
-
Guindon, S. et al. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 59, 307-21 (2010).
-
(2010)
Syst Biol.
, vol.59
, pp. 307-321
-
-
Guindon, S.1
-
53
-
-
0037036943
-
Dealing with saturation at the amino acid level: A case study based on anciently duplicated zebrafish genes
-
Van de Peer, Y., Frickey, T., Taylor, J. & Meyer, A. Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes. Gene. 295, 205-11 (2002).
-
(2002)
Gene.
, vol.295
, pp. 205-211
-
-
Van De Peer, Y.1
Frickey, T.2
Taylor, J.3
Meyer, A.4
-
54
-
-
79954529507
-
ProtTest 3: Fast selection of bestfit models of protein evolution
-
Darriba, D., Taboada, G., Doallo, R. & Posada, D. ProtTest 3: fast selection of bestfit models of protein evolution. Bioinformatics. 27, 1164-1165 (2011).
-
(2011)
Bioinformatics.
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.2
Doallo, R.3
Posada, D.4
-
55
-
-
45849154166
-
An improved general amino acid replacement matrix
-
Le, S. Q. & Gascuel, O. An improved general amino acid replacement matrix. Mol Biol Evol. 25, 1307-20 (2008).
-
(2008)
Mol Biol Evol.
, vol.25
, pp. 1307-1320
-
-
Le, S.Q.1
Gascuel, O.2
|