Label-free electronic probing of nucleic acids and proteins at the nanoscale using the nanoneedle biosensor

Biomicrofluidics

Volumn 7, Issue 4, 2013, Pages

  Esfandyarpour, Rahim ^a,b   Javanmard, Mehdi ^b   Koochak, Zahra ^c   Esfandyarpour, Hesaam ^a   Harris, James S ^a   Davis, Ronald W ^b  

^a Stanford University   (United States)

^b STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOSENSORS; ELECTRODES; FLUORESCENCE; NANONEEDLES; NUCLEIC ACIDS; PROTEINS;

ELECTRICAL DETECTION; ELECTRICAL RESPONSE; FLUORESCENT TAGGING; INDUCED DIPOLE MOMENTS; OPTICAL FLUORESCENCE; POINT OF CARE DIAGNOSTIC; PROTECTIVE OXIDES; RELATIVE PERMITTIVITY;

BIOMOLECULES;

EID: 84883394387     PISSN: 19321058     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.4817771     Document Type: Article

References (57)

1. Inoue K. Arai T. Aoyagi M. Biol. Pharm. Bull. 1999, 22:210. 10.1248/bpb.22.210, and.
2. McDermott B.M. Rux A.H. Eisenberg R.J. Cohen G.H. Racaniello V.R. J. Biol. Chem. 2000, 275:23089-23096. 10.1074/jbc.M002146200, and.
3. Xing L. Tjarnlund K. Lindqvist B. Kaplan G.G. Feigelstock D. Cheng R.H. Casasnovas J.M. EMBO J. 2000, 19:1207-1216. 10.1093/emboj/19.6.1207, and.
4. Catimel B. Weinstock J. Nerrie M. Domagala T. Nice E. J. Chromatogr. A 2000, 869:261-273. 10.1016/S0021-9673(99)01098-5, and.
5. Guermazi S. Regnault V. Gorgi Y. Ayed K. Lecompte T. Dellagi K. Blood Coagul. Fibrinolysis 2000, 11:491-498. 10.1097/00001721-200007000-00012, and.
6. Charalambous B.M. Feavers I.M. FEMS Microbiol. Lett. 2000, 191:45-50. 10.1111/j.1574-6968.2000.tb09317.x, and.
7. Chen H. Clayton A. Wang W. Sawyer W. Eur. J. Biochem. 2001, 268:1659-1669. 10.1046/j.1432-1327.2001.02039.x, and.
8. Elliott J.L. Mogridge J. Collier R.J. Biochemistry 2000, 39:6706-6713. 10.1021/bi000310u, and.
9. Uegaki K. Otomo T. Sakahira H. Shimizu M. Yumoto N. Kyogoku Y. Nagata S. Yamazaki T. J. Mol. Biol. 2000, 297:1121-1128. 10.1006/jmbi.2000.3643, and.
10. Andersen O.M. Christensen L.L. Christensen P.A. Sørensen E.S. Jacobsen C. Moestrup S.K. Etzerodt M. Thøgersen H.C. J. Biol. Chem. 2000, 275:21017-21024. 10.1074/jbc.M000507200, and.
11. Holaska J.M. Black B.E. Love D.C. Hanover J.A. Leszyk J. Paschal B.M. J. Cell Biol. 2001, 152:127-140. 10.1083/jcb.152.1.127, and.
12. Achen M.G. Roufail S. Domagala T. Catimel B. Nice E.C. Geleick D.M. Murphy R. Scott A.M. Caesar C. Makinen T. Eur. J. Biochem. 2000, 267:2505-2515. 10.1046/j.1432-1327.2000.01257.x, and.
13. Jokiranta T.S. Hellwage J. Koistinen V. Zipfel P.F. Meri S. J. Biol. Chem. 2000, 275(36):27657-27662. 10.1074/jbc.M002903200, and.
14. Vogel M. Miescher S. Kuhn S. Zürcher A.W. Stadler M.B. Ruf C. Effenberger F. Kricek F. Stadler B.M. J. Mol. Biol. 2000, 298:729-735. 10.1006/jmbi.2000.3713, and.
15. Ellson C.D. Gobert-Gosse S. Anderson K.E. Davidson K. Erdjument-Bromage H. Tempst P. Thuring J.W. Cooper M.A. Lim Z.-Y. Holmes A.B. Nat. Cell Biol. 2001, 3:679-682. 10.1038/35083076, and.
16. Gaullier J.-M. Rønning E. Gillooly D.J. Stenmark H. J. Biol. Chem. 2000, 275:24595-24600. 10.1074/jbc.M906554199, and.
17. Ablamunits V. Henegariu O. Hansen J.B. Opare-Addo L. Preston-Hurlburt P. Santamaria P. Mandrup-Poulsen T. Herold K.C. Diabetes 2012, 61:145-154. 10.2337/db11-1033, and.
18. Bier F.F. Kleinjung F. Scheller F.W. Sens. Actuators B 1997, 38:78-82. 10.1016/S0925-4005(97)80174-8, and.
19. Jensen K.K. Ørum H. Nielsen P.E. Nordén B. Biochemistry 1997, 36:5072-5077. 10.1021/bi9627525, and.
20. Nakatani K. Sando S. Saito I. Nat. Biotechnol. 2001, 19:51-55. 10.1038/83505, and.
21. Blaesing F. Weigel C. Welzeck M. Messer W. Mol. Microbiol. 2002, 36:557-569. 10.1046/j.1365-2958.2000.01881.x, and.
22. Hart D.J. Speight R.E. Blackburn J.M. Cooper M.A. Sutherland J.D. Nucleic Acids Res. 1999, 27:1063-1069. 10.1093/nar/27.4.1063, and.
23. Scire A. Tanfani F. Saccucci F. Bertoli E. Principato G. Proteins: Struct., Funct., Bioinf. 2000, 41:33-39. 10.1002/1097-0134(20001001)41:1<33::AID-PROT60>3.0.CO;2-N, and.
24. Steinrücke P. Aldinger U. Hill O. Hillisch A. Basch R. Diekmann S. Anal. Biochem. 2000, 286:26-34. 10.1006/abio.2000.4780, and.
25. Sang J. Du H. Wang W. Chu M. Wang Y. Li H. Zhang H.A. Wu W. Li Z. Biomicrofluidics 2013, 7:024112. 10.1063/1.4802936, and.
26. Koo H.-J. Velev O.D. Biomicrofluidics 2013, 7:031501. 10.1063/1.4804249, and.
27. Senapati S. Basuray S. Slouka Z. Cheng L.-J. Chang H.-C. Microfluidics 2011, 153-169. and in (Springer, ), pp.
28. Basuray S. Senapati S. Aijian A. Mahon A.R. Chang H.-C. ACS Nano 2009, 3:1823-1830. 10.1021/nn9004632, and.
29. Chen K.-I. Li B.-R. Chen Y.-T. Nano Today 2011, 6:131-154. 10.1016/j.nantod.2011.02.001, and.
30. Katz E. Willner I. Electroanalysis 2003, 15:913-947. 10.1002/elan.200390114, and.
31. Hong J. Yoon D.S. Park M.-I. Choi J. Kim T.S. Im G. Kim S. Pak Y.E. No K. Jpn. J. Appl. Phys., Part 1 2004, 43:5639-5645. 10.1143/JJAP.43.5639, and.
32. Liu Y.-S. Banada P.P. Bhattacharya S. Bhunia A.K. Bashir R. Appl. Phys. Lett. 2008, 92:143902. 10.1063/1.2908203, and.
33. Hansen P.L. Podgornik R. Parsegian V.A. Phys. Rev. E 2001, 64:021907. 10.1103/PhysRevE.64.021907, and.
34. Schmitz K.S. Macroions in Solution and Colloidal Suspension 1993, (VCH, New York, ).
35. Tomić S. Babić S.D. Vuletić T. Krča S. Ivanković D. Griparić L. Podgornik R. Phys. Rev. E 2007, 75:021905. 10.1103/PhysRevE.75.021905, and.
36. Angelini T.E. Golestanian R. Coridan R.H. Butler J.C. Beraud A. Krisch M. Sinn H. Schweizer K.S. Wong G.C. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:7962-7967. 10.1073/pnas.0601435103, and.
37. Bordi F. Cametti C. Colby R. J. Phys.: Condens. Matter 2004, 16:R1423. 10.1088/0953-8984/16/49/R01, and.
38. Jungner G. Jungner I. Allgen L. Nature 1949, 164:1009. 10.1038/1641009a0, and.
39. Brillouin L. Kasha M. Pullman B. Horizons in Biochemistry 1962, and in (Academic Press, London, ).
40. Suhai S. Ladik J. Int. J. Quantum Chem. 1973, 7:547-560. 10.1002/qua.560070310, and.
41. Dee D. Baur M. J. Chem. Phys. 1974, 60:541-560. 10.1063/1.1681073, and.
42. Murphy C. Arkin M. Jenkins Y. Ghatlia N. Bossmann S. Turro N. Barton J. Science 1993, 262:1025-1029. 10.1126/science.7802858, and.
43. Priyadarshy S. Risser S. Beratan D. J. Phys. Chem. 1996, 100:17678-17682. 10.1021/jp961731h, and.
44. Risser S.M. Beratan D.N. Meade T.J. J. Am. Chem. Soc. 1993, 115:2508-2510. 10.1021/ja00059a057, and.
45. Williams R. Mol. Phys. 1989, 68:1-23. 10.1080/00268978900101931.
46. Baverstock K. Cundall R. Int. J. Rad Appl. Instrum. C 1988, 32(3):553-556. 10.1016/1359-0197(88)90063-X, and.
47. Arkin M. Stemp E. Holmlin R. Barton J. Hörmann A. Olson E. Barbara P. Science (New York, NY 1996, 273:475. 10.1126/science.273.5274.475, and ).
48. Holmlin R.E. Stemp E.D. Barton J.K. J. Am. Chem. Soc. 1996, 118:5236-5244. 10.1021/ja953941y, and.
49. Kelley S.O. Barton J.K. Chem. Biol. 1998, 5:413-425. 10.1016/S1074-5521(98)90158-2, and.
50. Kelley S.O. Holmlin R.E. Stemp E.D. Barton J.K. J. Am. Chem. Soc. 1997, 119:9861-9870. 10.1021/ja9714651, and.
51. Bakhshi A. Prog. Biophys. Mol. Biol. 1994, 61:187. 10.1016/0079-6107(94)90001-9.
52. Beratan D.N. J. Am. Chem. Soc 1986, 108:4321-4326. 10.1021/ja00275a014.
53. Esfandyarpour R. Esfandyarpour H. Javanmard M. Harris J.S. Davis R.W. Microneedle biosensor: A method for direct label-free real time protein detection. Sens. Actuators B: Chem. 2012, 177:848-855. 10.1016/j.snb.2012.11.064.
54. Esfandyarpour R. Esfandyarpour H. Javanmard M. Harris J.S. Davis R.W. Electrical Detection of Protein Biomarkers Using Nanoneedle Biosensors 2012, and (Cambridge University Press, ).
55. Esfandyarpour R. Javanmard M. Harris J.S. Davis R.W. Thin Film Nanoelectronic Probe for Protein Detection 2013, and (Cambridge Univ Press, ).
56. Esfandyarpour R. Javanmard M. Koochak Z. Harris J.S. Davis R.W. Nanoelectronic impedance detection of target cells. Biotechnol. Bioeng. (in press).
57. Esfandyarpour R. Esfandyarpour H. Harris J.S. Davis R.W. Simulation and fabrication of a new novel 3D injectable biosensor for high throughput genomics and proteomics in a lab-on-a-chip device. Nanotechnology (in press).