Kinetics for hybridization of peptide nucleic acids (PNA) with DNA and RNA studied with the BIAcore technique

Biochemistry

Volumn 36, Issue 16, 1997, Pages 5072-5077

  Kilså Jensen, Kristine ^a,c   Ørum, Henrik ^b   Nielsen, Peter E ^a   Nordén, Bengt ^c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b PNA Diagnostics A/S   (Denmark)

^c CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEIC ACID;

ARTICLE; ARTIFACT; DNA DETERMINATION; DNA HYBRIDIZATION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DNA INTERACTION; QUANTITATIVE DIAGNOSIS; RNA HYBRIDIZATION; THERMOSTABILITY;

BIOSENSING TECHNIQUES; DNA; GLYCINE; KINETICS; NUCLEIC ACID HETERODUPLEXES; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDES, ANTISENSE; PEPTIDES; RNA;

EID: 0342618762     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9627525     Document Type: Article

References (28)

1. Bonham, M. A., Brown, S., Boyd, A. L., Brown, P. H., Bruckenstein, D. A., Hanvey, J. C., Thomson, S. A., Pipe, A., Hassman, F., Bisi, J. E., Froehler, B. C., Matteucci, M. D., Wagner, R. W., Noble, S. A., & Babiss, L. E. (1995) Nucleic Acids Res. 23, 1197-1203.
2. Christensen, L., Fitzpatrick, R., Gildea, B., Petersen, K. H., Hansen, H. F., Koch, T., Egholm, M., Buchardt, O., Nielsen, P. E., Coull, J., & Berg, R. H. (1995) J. Peptide Sci. 3, 175-183.
3. Demidov, V., Frank-Kamenetskii, M. D., Egholm, M., Buchardt, O., & Nielsen, P. E. (1993) Nucleic Acids Res. 21, 2103-2107.
4. Demidov, V., Potaman, V. N., Frank-Kamenetskii, M. D., Buchardt, O., Egholm, M., & Nielsen, P. E. (1994) Biochem. Pharmacol. 48, 1309-1313.
5. Demidov, V. V., Cherny, D., Kurakin, A. V., Yanilovich, M. V., Malkov, V. A., Frank-Kamenetskii, M. D., Sönnichsen, S. H., & Nielsen, P. E. (1995) Nucleic Acids Res. 22, 5218-5222.
6. Dueholm, K. L., Egholm, M., Behrens, C., Christensen, L., Hansen, H. F., Vulpius, T., Petersen, K., Berg, R. H., Nielsen, P. E., & Buchardt, O. (1994) J. Org. Chem. 59, 5767-5773.
7. Egholm, M., Buchardt, O., Christensen, L., Behrens, C., Freier, S. M., Driver, D. A., Berg, R. H., Kim, S. K., Norden, B., & Nielsen, P. E. (1993) Nature 365, 556-568.
8. Egholm, M., Christensen, L., Dueholm, K., Buchardt, O., Coull, J., & Nielsen, P. E. (1995) Nucleic Acids Res. 23, 217-222.
9. Fägerstam, L. G., & Karlsson, R. (1993) Immunochemistry (van Oss & van Regenmortel, Eds.) pp 949-970, Marcel Dekker Inc., New York.
10. Gotoh, Y. M. H., Shinohara, Y., Shimizu, T., & Mizuho, M. (1995) DNA Res. 2, 285-293.
11. Hanvey, J. C., Peffer, N. C., Bisi, J. E., Thomson, S. A., Cadilla, R., Josey, J. A., Ricca, D. J., Hassman, C. F., Bonham, M. A., Au, K. G., Carter, S. G., Bruckenstein, D. A., Boyd, A. L., Noble, S. A., & Babiss, L. E. (1992) Science 258, 1481-1485.
12. Jönsson, U. (1991) BioTechniques 11, 620-627.
13. Knudsen, H., & Nielsen, P. E. (1996) Nucleic Acids Res. 24, 494-500.
14. Lagriffoule, P., Wittung, P., Eriksson, M., Kilså Jensen, K., Nordén, B., Buchardt, O., & Nielsen, P. E. (1997) Chem. - Eur. J. (submitted for publication).
15. Malmqvist, M. (1993) Immunotechnology Colloqium at 22nd FEBS Letters Meeting Dublin 1992 (Gosling, J. P., & Reen, D., Eds.) pp 61-75, Portland Press, Colchester, U.K.
16. Malmqvist, M., & Granzow, R. (1994) Methods: Companion Methods Enzymol. 6, 95-98.
17. Marky, E. A., & Breslauer, K. J. (1987) Biopolymers 26, 1601-1620.
18. Nielsen, P. E., Egholm, M., Berg, R. H., & Buchardt, O. (1991) Science 254, 1497-1500.
19. Nielsen, P. E., Egholm, M., & Buchardt, O. (1994a) Bioconjugate Chem. 5, 3-7.
20. Nielsen, P. E., Egholm, M., & Buchardt, O. (1994b) Gene 149, 139-145.
21. Nielsen, P. E., & Ørum, H. (1995) Molecular Biology: Current Innovations and Future Trends (Griffin, H., Ed.) pp 73-86, Horizon Scientific Press, U.K.
22. Nilsson, P., Persson, B., Uhlén, M., & Nygren, P.-Å. (1995) Anal. Biochem. 224, 400-408.
23. Ørum, H., Nielsen, P. E., Egholm, M., Berg, R. H., Buchardt, O., & Stanley, C. (1993) Nucleic Acids Res. 21, 5332-5336.
24. Ørum, H., Jørgensen, M., Koch, T., Nielsen, P. E., Larsson, C., & Stanley, C. (1995) BioTechniques 19, 472-480.
25. O'Shannessy, D. J., Brigham-Burke, M., Soneson, K. K., & Hensley, P. (1993) Anal. Biochem. 212, 457-468.
26. Tomac, S., Sarkar, M., Ratilainen, T., Wittung, P., Nielsen, P. E., Nordén, B., & Gräslund, A. (1996) J. Am. Chem. Soc. 118, 5544-5552.
27. Veselkov, A. G., Demidov, V., Nielsen, P. E., & Frank-Kamenetskii, M. D. (1996) Nature 379, 214.
28. Wood, S. J. (1993) Microchem. J. 47, 330-337.