-
1
-
-
84925505132
-
Alkaline environments and biodiversity
-
In: Gerday EC, Glansdorff N, editors, Oxford, UK: UNESCO, Eolss Publishers
-
Grant WD (2006) Alkaline environments and biodiversity. In: Gerday EC, Glansdorff N, editors. Extremophiles. Oxford, UK: UNESCO, Eolss Publishers.
-
(2006)
Extremophiles
-
-
Grant, W.D.1
-
2
-
-
84983864326
-
Photosynthetic rates of phytoplankton in East African alkaline, saline lakes
-
Melack JM, Kilham P, (1974) Photosynthetic rates of phytoplankton in East African alkaline, saline lakes. Limnol Oceanogr 19: 743-755.
-
(1974)
Limnol Oceanogr
, vol.19
, pp. 743-755
-
-
Melack, J.M.1
Kilham, P.2
-
4
-
-
0033022073
-
Bioenergetic aspects of halophilism
-
Oren A, (1999) Bioenergetic aspects of halophilism. Microbiol Mol Biol Rev 63: 334-348.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 334-348
-
-
Oren, A.1
-
5
-
-
84863647066
-
Fuchsiella alkaliacetigena gen. nov., sp. nov., an alkaliphilic, lithoautotrophic homoacetogen from a soda lake
-
Zhilina TN, Zavarzina DG, Panteleeva AN, Osipov GA, Kostrikina NA, et al. (2012) Fuchsiella alkaliacetigena gen. nov., sp. nov., an alkaliphilic, lithoautotrophic homoacetogen from a soda lake. Int J Syst Evol Microbiol 62: 1666-1673.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 1666-1673
-
-
Zhilina, T.N.1
Zavarzina, D.G.2
Panteleeva, A.N.3
Osipov, G.A.4
Kostrikina, N.A.5
-
6
-
-
4043164886
-
Cyanobacteria and cyanobacterial toxins in three alkaline Rift Valley lakes of Kenya - Lakes Bogoria, Nakuru and Elmenteita
-
Ballot A, Krienitz L, Kotut K, Wiegand C, Metcalf JS, et al. (2004) Cyanobacteria and cyanobacterial toxins in three alkaline Rift Valley lakes of Kenya- Lakes Bogoria, Nakuru and Elmenteita. J Plankton Res 26: 925-935.
-
(2004)
J Plankton Res
, vol.26
, pp. 925-935
-
-
Ballot, A.1
Krienitz, L.2
Kotut, K.3
Wiegand, C.4
Metcalf, J.S.5
-
7
-
-
84883385453
-
Diversity of extremophilic purple phototrophic bacteria in Soap Lake, a Central Washington (USA) Soda Lake
-
Asao M, Pinkart HC, Madigan MT, (2011) Diversity of extremophilic purple phototrophic bacteria in Soap Lake, a Central Washington (USA) Soda Lake. Environ Microbiol 26: 925-935.
-
(2011)
Environ Microbiol
, vol.26
, pp. 925-935
-
-
Asao, M.1
Pinkart, H.C.2
Madigan, M.T.3
-
8
-
-
0033900361
-
Rhodobaca bogoriensis gen. nov. and sp. nov., an alkaliphilic purple nonsulfur bacterium from African Rift Valley soda lakes
-
Milford AD, Achenbach LA, Jung DO, Madigan MT, (2000) Rhodobaca bogoriensis gen. nov. and sp. nov., an alkaliphilic purple nonsulfur bacterium from African Rift Valley soda lakes. Arch Microbiol 174: 18-27.
-
(2000)
Arch Microbiol
, vol.174
, pp. 18-27
-
-
Milford, A.D.1
Achenbach, L.A.2
Jung, D.O.3
Madigan, M.T.4
-
9
-
-
79953771459
-
High abundances of aerobic anoxygenic phototrophs in saline steppe lakes
-
Medová H, Boldareva EN, Hrouzek P, Borzenko SV, Namsaraev ZB, et al. (2011) High abundances of aerobic anoxygenic phototrophs in saline steppe lakes. FEMS Microbiol Ecol 76: 393-400.
-
(2011)
FEMS Microbiol Ecol
, vol.76
, pp. 393-400
-
-
Medová, H.1
Boldareva, E.N.2
Hrouzek, P.3
Borzenko, S.V.4
Namsaraev, Z.B.5
-
10
-
-
4644232773
-
Diversity of Kenyan soda lake alkaliphiles assessed by molecular methods
-
Rees HC, Grant WD, Jones BE, Heaphy S, (2004) Diversity of Kenyan soda lake alkaliphiles assessed by molecular methods. Extremophiles 8: 63-71.
-
(2004)
Extremophiles
, vol.8
, pp. 63-71
-
-
Rees, H.C.1
Grant, W.D.2
Jones, B.E.3
Heaphy, S.4
-
11
-
-
84855300278
-
The microbial sulfur cycle at extremely haloalkaline conditions of soda lakes
-
Sorokin DY, Kuenen JG, Muyzer G, (2011) The microbial sulfur cycle at extremely haloalkaline conditions of soda lakes. Front Microbiol 2: 44.
-
(2011)
Front Microbiol
, vol.2
, pp. 44
-
-
Sorokin, D.Y.1
Kuenen, J.G.2
Muyzer, G.3
-
12
-
-
84862306963
-
Molecular diversity of methanogens and identification of Methanolobus sp. as active methylotrophic Archaea in Lonar crater lake sediments
-
Antony CP, Murrell JC, Shouche YS, (2012) Molecular diversity of methanogens and identification of Methanolobus sp. as active methylotrophic Archaea in Lonar crater lake sediments. FEMS Microbiol Ecol 81: 43-51.
-
(2012)
FEMS Microbiol Ecol
, vol.81
, pp. 43-51
-
-
Antony, C.P.1
Murrell, J.C.2
Shouche, Y.S.3
-
13
-
-
77958583428
-
Temporal bacterial diversity and detection of putative methanotrophs in surface mats of Lonar crater lake
-
Surakasi VP, Antony CP, Sharma S, Patole MS, Shouche YS, (2010) Temporal bacterial diversity and detection of putative methanotrophs in surface mats of Lonar crater lake. J Basic Microbiol 50: 465-474.
-
(2010)
J Basic Microbiol
, vol.50
, pp. 465-474
-
-
Surakasi, V.P.1
Antony, C.P.2
Sharma, S.3
Patole, M.S.4
Shouche, Y.S.5
-
14
-
-
84862334963
-
Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater
-
Antony CP, Doronina NV, Boden R, Trotsenko YA, Shouche YS, et al. (2012) Methylophaga lonarensis sp. nov., a moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater. Int J Syst Evol Microbiol 62: 1613-1618.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 1613-1618
-
-
Antony, C.P.1
Doronina, N.V.2
Boden, R.3
Trotsenko, Y.A.4
Shouche, Y.S.5
-
15
-
-
4644335844
-
Molecular diversity of methanotrophs in Transbaikal soda lake sediments and identification of potentially active populations by stable isotope probing
-
Lin J-L, Radajewski S, Eshinimaev BT, Trotsenko YA, McDonald IR, et al. (2004) Molecular diversity of methanotrophs in Transbaikal soda lake sediments and identification of potentially active populations by stable isotope probing. Environ Microbiol 6: 1049-1060.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1049-1060
-
-
Lin, J.-L.1
Radajewski, S.2
Eshinimaev, B.T.3
Trotsenko, Y.A.4
McDonald, I.R.5
-
16
-
-
70350151424
-
Genetic Diversity of Eukaryotic Plankton Assemblages in Eastern Tibetan Lakes Differing by their Salinity and Altitude
-
Wu Q, Chatzinotas A, Wang J, Boenigk J, (2009) Genetic Diversity of Eukaryotic Plankton Assemblages in Eastern Tibetan Lakes Differing by their Salinity and Altitude. Microb Ecol 58: 569-581.
-
(2009)
Microb Ecol
, vol.58
, pp. 569-581
-
-
Wu, Q.1
Chatzinotas, A.2
Wang, J.3
Boenigk, J.4
-
17
-
-
0037315929
-
Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California
-
Humayoun SB, Bano N, Hollibaugh JT, (2003) Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California. Appl Environ Microbiol 69: 1030-1042.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1030-1042
-
-
Humayoun, S.B.1
Bano, N.2
Hollibaugh, J.T.3
-
18
-
-
49449100545
-
Spatial and temporal patterns in the microbial diversity of a meromictic soda lake in Washington State
-
Dimitriu PA, Pinkart HC, Peyton BM, Mormile MR, (2008) Spatial and temporal patterns in the microbial diversity of a meromictic soda lake in Washington State. Appl Environ Microbiol 74: 4877-4888.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 4877-4888
-
-
Dimitriu, P.A.1
Pinkart, H.C.2
Peyton, B.M.3
Mormile, M.R.4
-
19
-
-
84859228145
-
Do patterns of bacterial diversity along salinity gradients differ from those observed for macroorganisms?
-
Wang J, Yang D, Zhang Y, Shen J, van der Gast C, et al. (2011) Do patterns of bacterial diversity along salinity gradients differ from those observed for macroorganisms? PLoS ONE 6: e27597.
-
(2011)
PLoS ONE
, vol.6
-
-
Wang, J.1
Yang, D.2
Zhang, Y.3
Shen, J.4
van der Gast, C.5
-
20
-
-
35448992467
-
Novel and Unexpected Prokaryotic Diversity in Water and Sediments of the Alkaline, Hypersaline Lakes of the Wadi An Natrun, Egypt
-
Mesbah N, Abou-El-Ela S, Wiegel J, (2007) Novel and Unexpected Prokaryotic Diversity in Water and Sediments of the Alkaline, Hypersaline Lakes of the Wadi An Natrun, Egypt. Microbial Ecology 54: 598-617.
-
(2007)
Microbial Ecology
, vol.54
, pp. 598-617
-
-
Mesbah, N.1
Abou-El-Ela, S.2
Wiegel, J.3
-
21
-
-
78650142323
-
Biogeography and habitat modelling of high-alpine bacteria
-
King AJ, Freeman KR, McCormick KF, Lynch RC, Lozupone C, et al. (2010) Biogeography and habitat modelling of high-alpine bacteria. Nat Commun 1: 53.
-
(2010)
Nat Commun
, vol.1
, pp. 53
-
-
King, A.J.1
Freeman, K.R.2
McCormick, K.F.3
Lynch, R.C.4
Lozupone, C.5
-
22
-
-
79961166996
-
Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA
-
Lanzén A, Jørgensen SL, Bengtsson MM, Jonassen I, Øvreås L, et al. (2011) Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA. FEMS Microbiol Ecol 77: 577-589.
-
(2011)
FEMS Microbiol Ecol
, vol.77
, pp. 577-589
-
-
Lanzén, A.1
Jørgensen, S.L.2
Bengtsson, M.M.3
Jonassen, I.4
Øvreås, L.5
-
23
-
-
49649087440
-
Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
-
Urich T, Lanzén A, Qi J, Huson DH, Schleper C, et al. (2008) Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS ONE 3: e2527.
-
(2008)
PLoS ONE
, vol.3
-
-
Urich, T.1
Lanzén, A.2
Qi, J.3
Huson, D.H.4
Schleper, C.5
-
24
-
-
34249693208
-
Lake Morphology and Chemistry
-
In: Tudorancea C, Taylor WD, editors
-
Baxter RM (2002) Lake Morphology and Chemistry. In: Tudorancea C, Taylor WD, editors. Ethiopian rift valley lakes: Backhuys.
-
(2002)
Ethiopian rift valley lakes: Backhuys
-
-
Baxter, R.M.1
-
25
-
-
34249690156
-
Water management problems in the Ethiopian rift: Challenges for development
-
Ayenew T, (2007) Water management problems in the Ethiopian rift: Challenges for development. J Afr Earth Sci 48: 222-236.
-
(2007)
J Afr Earth Sci
, vol.48
, pp. 222-236
-
-
Ayenew, T.1
-
26
-
-
59049107184
-
Non-climatic growth of the saline Lake Beseka, Main Ethiopian Rift
-
Gloaguen AG, Egbert J, (2009) Richard (2009) Non-climatic growth of the saline Lake Beseka, Main Ethiopian Rift. J Arid Environ 73: 287-295.
-
(2009)
J Arid Environ
, vol.73
, pp. 287-295
-
-
Gloaguen, A.G.1
Egbert, J.2
-
28
-
-
53849104257
-
The rational exploration of microbial diversity
-
Quince C, Curtis TP, Sloan WT, (2008) The rational exploration of microbial diversity. ISME J 2: 997-1006.
-
(2008)
ISME J
, vol.2
, pp. 997-1006
-
-
Quince, C.1
Curtis, T.P.2
Sloan, W.T.3
-
29
-
-
84869030635
-
CREST - Classification Resources for Environmental Sequence Tags
-
Lanzén A, Jørgensen SL, Huson DH, Gorfer M, Grindhaug SH, et al. (2012) CREST- Classification Resources for Environmental Sequence Tags. PLoS ONE 7: e49334.
-
(2012)
PLoS ONE
, vol.7
-
-
Lanzén, A.1
Jørgensen, S.L.2
Huson, D.H.3
Gorfer, M.4
Grindhaug, S.H.5
-
30
-
-
77950080387
-
The dynamic genome of Hydra
-
Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, et al. (2010) The dynamic genome of Hydra. Nature 464: 592-596.
-
(2010)
Nature
, vol.464
, pp. 592-596
-
-
Chapman, J.A.1
Kirkness, E.F.2
Simakov, O.3
Hampson, S.E.4
Mitros, T.5
-
31
-
-
0030871771
-
Bacteria-chlorophyll relationships in Ethiopian lakes of varying salinity: are soda lakes different?
-
Zinabu GM, Taylor WD, (1997) Bacteria-chlorophyll relationships in Ethiopian lakes of varying salinity: are soda lakes different? J Plankton Res 19: 647-654.
-
(1997)
J Plankton Res
, vol.19
, pp. 647-654
-
-
Zinabu, G.M.1
Taylor, W.D.2
-
32
-
-
84868094960
-
Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance
-
Kembel SW, Wu M, Eisen JA, Green JL, (2012) Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance. PLoS Comput Biol 8: e1002743.
-
(2012)
PLoS Comput Biol
, vol.8
-
-
Kembel, S.W.1
Wu, M.2
Eisen, J.A.3
Green, J.L.4
-
33
-
-
83655181356
-
Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure
-
Terrat S, Christen R, Dequiedt S, Lelièvre M, Nowak V, et al. (2012) Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure. Microb Biotechnol 5: 135-141.
-
(2012)
Microb Biotechnol
, vol.5
, pp. 135-141
-
-
Terrat, S.1
Christen, R.2
Dequiedt, S.3
Lelièvre, M.4
Nowak, V.5
-
34
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki MT, Giovannoni SJ, (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 62: 625-630.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
35
-
-
0034870192
-
Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness
-
Gotelli NJ, Colwell RK, (2001) Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness. Ecol Lett 4: 379-391.
-
(2001)
Ecol Lett
, vol.4
, pp. 379-391
-
-
Gotelli, N.J.1
Colwell, R.K.2
-
36
-
-
84865755143
-
Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau
-
Xiong J, Liu Y, Lin X, Zhang H, Zeng J, et al. (2012) Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau. Environ Microbiol 14: 2457-2466.
-
(2012)
Environ Microbiol
, vol.14
, pp. 2457-2466
-
-
Xiong, J.1
Liu, Y.2
Lin, X.3
Zhang, H.4
Zeng, J.5
-
37
-
-
33747359120
-
Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China
-
Wu QL, Zwart G, Schauer M, van Agterveld MPK, Hahn MW, (2006) Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan Plateau, China. Appl Environ Microbiol 72: 5478-5485.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5478-5485
-
-
Wu, Q.L.1
Zwart, G.2
Schauer, M.3
van Agterveld, M.P.K.4
Hahn, M.W.5
-
38
-
-
80052964484
-
Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea
-
Herlemann DP, Labrenz M, Jürgens K, Bertilsson S, Waniek JJ, et al. (2011) Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea. ISME J 5: 1571-1579.
-
(2011)
ISME J
, vol.5
, pp. 1571-1579
-
-
Herlemann, D.P.1
Labrenz, M.2
Jürgens, K.3
Bertilsson, S.4
Waniek, J.J.5
-
39
-
-
84859443094
-
Microbial diversity under extreme euxinia: Mahoney Lake, Canada
-
Klepac-Ceraj V, Hayes CA, Gilhooly WP, Lyons TW, Kolter R, et al. (2012) Microbial diversity under extreme euxinia: Mahoney Lake, Canada. Geobiology 10: 223-235.
-
(2012)
Geobiology
, vol.10
, pp. 223-235
-
-
Klepac-Ceraj, V.1
Hayes, C.A.2
Gilhooly, W.P.3
Lyons, T.W.4
Kolter, R.5
-
40
-
-
84865319078
-
Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1
-
Peura S, Eiler A, Bertilsson S, Nykänen H, Tiirola M, et al. (2012) Distinct and diverse anaerobic bacterial communities in boreal lakes dominated by candidate division OD1. ISME J 6: 1640-1652.
-
(2012)
ISME J
, vol.6
, pp. 1640-1652
-
-
Peura, S.1
Eiler, A.2
Bertilsson, S.3
Nykänen, H.4
Tiirola, M.5
-
41
-
-
79951517955
-
Euxinic freshwater hypolimnia promote bacterial endemicity in continental areas
-
Barberán A, Casamayor EO, (2011) Euxinic freshwater hypolimnia promote bacterial endemicity in continental areas. Microb Ecol 61: 465-472.
-
(2011)
Microb Ecol
, vol.61
, pp. 465-472
-
-
Barberán, A.1
Casamayor, E.O.2
-
42
-
-
50149083715
-
Everything is everywhere: but the environment selects': ubiquitous distribution and ecological determinism in microbial biogeography
-
O'Malley MA, (2008) 'Everything is everywhere: but the environment selects': ubiquitous distribution and ecological determinism in microbial biogeography. Stud Hist Philos Biol Biomed Sci 39: 314-325.
-
(2008)
Stud Hist Philos Biol Biomed Sci
, vol.39
, pp. 314-325
-
-
O'Malley, M.A.1
-
43
-
-
84861347388
-
Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships
-
Logue JB, Langenheder S, Andersson AF, Bertilsson S, Drakare S, et al. (2012) Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships. ISME J 6: 1127-1136.
-
(2012)
ISME J
, vol.6
, pp. 1127-1136
-
-
Logue, J.B.1
Langenheder, S.2
Andersson, A.F.3
Bertilsson, S.4
Drakare, S.5
-
44
-
-
79251565226
-
Removing noise from pyrosequenced amplicons
-
Quince C, Lanzén A, Davenport RJ, Turnbaugh PJ, (2011) Removing noise from pyrosequenced amplicons. BMC BIoinformatics 12: 38.
-
(2011)
BMC BIoinformatics
, vol.12
, pp. 38
-
-
Quince, C.1
Lanzén, A.2
Davenport, R.J.3
Turnbaugh, P.J.4
-
45
-
-
80055082991
-
On the suitability of short reads of 16S rRNA for phylogeny-based analyses in environmental surveys
-
Jeraldo P, Chia N, Goldenfeld N, (2011) On the suitability of short reads of 16S rRNA for phylogeny-based analyses in environmental surveys. Environ Microbiol 13: 3000-3009.
-
(2011)
Environ Microbiol
, vol.13
, pp. 3000-3009
-
-
Jeraldo, P.1
Chia, N.2
Goldenfeld, N.3
-
46
-
-
68549130740
-
Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys
-
Youssef N, Sheik CS, Krumholz LR, Najar FZ, Roe BA, et al. (2009) Comparison of species richness estimates obtained using nearly complete fragments and simulated pyrosequencing-generated fragments in 16S rRNA gene-based environmental surveys. Appl Environ Microbiol 75: 5227-5236.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5227-5236
-
-
Youssef, N.1
Sheik, C.S.2
Krumholz, L.R.3
Najar, F.Z.4
Roe, B.A.5
-
47
-
-
77950526876
-
Dormancy contributes to the maintenance of microbial diversity
-
Jones SE, Lennon JT, (2010) Dormancy contributes to the maintenance of microbial diversity. Proc Natl Acad Sci U S A 107: 5881-5886.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 5881-5886
-
-
Jones, S.E.1
Lennon, J.T.2
-
48
-
-
0036703471
-
The Ziway-Shala lake basin (main Ethiopian rift, Ethiopia): a revision of basin evolution with special reference to the Late Quaternary
-
Benvenuti M, Carnicelli S, Belluomini G, Dainelli N, Di Grazia S, et al. (2002) The Ziway-Shala lake basin (main Ethiopian rift, Ethiopia): a revision of basin evolution with special reference to the Late Quaternary. J Afr Earth Sci 35: 247-269.
-
(2002)
J Afr Earth Sci
, vol.35
, pp. 247-269
-
-
Benvenuti, M.1
Carnicelli, S.2
Belluomini, G.3
Dainelli, N.4
Di Grazia, S.5
-
49
-
-
0035882988
-
Patterns of variation in waterbird numbers on four Rift Valley lakes in Kenya, 1991-1999
-
Owino AO, Oyugi JO, Nasirwa OO, Bennun LA, (2001) Patterns of variation in waterbird numbers on four Rift Valley lakes in Kenya, 1991-1999. Hydrobiologia 458: 45-53.
-
(2001)
Hydrobiologia
, vol.458
, pp. 45-53
-
-
Owino, A.O.1
Oyugi, J.O.2
Nasirwa, O.O.3
Bennun, L.A.4
-
50
-
-
84861776235
-
Deep underwater seismic explosion experiments and their possible ecological impact - The case of Lake Arenguade - Central Ethiopian highlands
-
Girma MB, Kifle D, Jebessa H, (2012) Deep underwater seismic explosion experiments and their possible ecological impact- The case of Lake Arenguade- Central Ethiopian highlands. Limnologica (Other) 42: 212-219.
-
(2012)
Limnologica (Other)
, vol.42
, pp. 212-219
-
-
Girma, M.B.1
Kifle, D.2
Jebessa, H.3
-
51
-
-
80053128347
-
Integrative taxonomy of the Pavlovophyceae (Haptophyta): a reassessment
-
Bendif EM, Probert I, Hervé A, Billard C, Goux D, et al. (2011) Integrative taxonomy of the Pavlovophyceae (Haptophyta): a reassessment. Protist 162: 738-761.
-
(2011)
Protist
, vol.162
, pp. 738-761
-
-
Bendif, E.M.1
Probert, I.2
Hervé, A.3
Billard, C.4
Goux, D.5
-
52
-
-
0031851586
-
Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well
-
Ollivier B, Fardeau ML, Cayol JL, Magot M, Patel BK, et al. (1998) Methanocalculus halotolerans gen. nov., sp. nov., isolated from an oil-producing well. Int J Syst Bacteriol 48 Pt 3: 821-828.
-
(1998)
Int J Syst Bacteriol 48 Pt
, vol.3
, pp. 821-828
-
-
Ollivier, B.1
Fardeau, M.L.2
Cayol, J.L.3
Magot, M.4
Patel, B.K.5
-
53
-
-
79959289950
-
The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology
-
Pester M, Schleper C, Wagner M, (2011) The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 14: 300-306.
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 300-306
-
-
Pester, M.1
Schleper, C.2
Wagner, M.3
-
54
-
-
55749097642
-
Nitrification in Mono Lake, California: Activity and community composition during contrasting hydrological regimes
-
Carini SA, Joye SB, (2008) Nitrification in Mono Lake, California: Activity and community composition during contrasting hydrological regimes. Limnol Oceanogr 53: 2546-2557.
-
(2008)
Limnol Oceanogr
, vol.53
, pp. 2546-2557
-
-
Carini, S.A.1
Joye, S.B.2
-
55
-
-
70350163399
-
Molecular analysis of prokaryotic diversity in the deep subsurface of the former Homestake gold mine, South Dakota, USA
-
Rastogi G, Stetler L, Peyton B, Sani R, (2009) Molecular analysis of prokaryotic diversity in the deep subsurface of the former Homestake gold mine, South Dakota, USA. J Microbiol 47: 371-384.
-
(2009)
J Microbiol
, vol.47
, pp. 371-384
-
-
Rastogi, G.1
Stetler, L.2
Peyton, B.3
Sani, R.4
-
56
-
-
28644447444
-
Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments
-
Nunoura T, Hirayama H, Takami H, Oida H, Nishi S, et al. (2005) Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments. Environ Microbiol 7: 1967-1984.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1967-1984
-
-
Nunoura, T.1
Hirayama, H.2
Takami, H.3
Oida, H.4
Nishi, S.5
-
57
-
-
84867638141
-
Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge
-
Jørgensen SL, Hannisdal B, Lanzén A, Baumberger T, Flesland K, et al. (2012) Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge. Proc Natl Acad Sci U S A 109: e2846-e2855.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
-
-
Jørgensen, S.L.1
Hannisdal, B.2
Lanzén, A.3
Baumberger, T.4
Flesland, K.5
-
58
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB, (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci U S A 102: 14683-14688.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
59
-
-
77954639120
-
Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context
-
Bartossek R, Nicol GW, Lanzen A, Klenk H-P, Schleper C, (2010) Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context. Environ Microbiol 12: 1075-1088.
-
(2010)
Environ Microbiol
, vol.12
, pp. 1075-1088
-
-
Bartossek, R.1
Nicol, G.W.2
Lanzen, A.3
Klenk, H.-P.4
Schleper, C.5
-
60
-
-
84863691368
-
Production of oceanic nitrous oxide by ammonia-oxidizing archaea
-
Löscher CR, Kock A, Könneke M, LaRoche J, Bange HW, et al. (2012) Production of oceanic nitrous oxide by ammonia-oxidizing archaea. Biogeosciences 9: 2419-2429.
-
(2012)
Biogeosciences
, vol.9
, pp. 2419-2429
-
-
Löscher, C.R.1
Kock, A.2
Könneke, M.3
LaRoche, J.4
Bange, H.W.5
-
61
-
-
80052490842
-
Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea
-
Santoro AE, Buchwald C, McIlvin MR, Casciotti KL, (2011) Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea. Science 333: 1282-1285.
-
(2011)
Science
, vol.333
, pp. 1282-1285
-
-
Santoro, A.E.1
Buchwald, C.2
McIlvin, M.R.3
Casciotti, K.L.4
-
62
-
-
84867688970
-
Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats
-
Mosier AC, Lund MB, Francis CA, (2012) Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats. Microb Ecol 64: 955-963.
-
(2012)
Microb Ecol
, vol.64
, pp. 955-963
-
-
Mosier, A.C.1
Lund, M.B.2
Francis, C.A.3
-
63
-
-
84859571764
-
Free-living and aggregate-associated Planctomycetes in the Black Sea
-
Fuchsman CA, Staley JT, Oakley BB, Kirkpatrick JB, Murray JW, (2012) Free-living and aggregate-associated Planctomycetes in the Black Sea. FEMS Microbiol Ecol 80: 402-416.
-
(2012)
FEMS Microbiol Ecol
, vol.80
, pp. 402-416
-
-
Fuchsman, C.A.1
Staley, J.T.2
Oakley, B.B.3
Kirkpatrick, J.B.4
Murray, J.W.5
-
64
-
-
70349577128
-
Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae classis nov. in the phylum Planctomycetes
-
Fukunaga Y, Kurahashi M, Sakiyama Y, Ohuchi M, Yokota A, et al. (2009) Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae classis nov. in the phylum Planctomycetes. J Gen Appl Microbiol 55: 267-275.
-
(2009)
J Gen Appl Microbiol
, vol.55
, pp. 267-275
-
-
Fukunaga, Y.1
Kurahashi, M.2
Sakiyama, Y.3
Ohuchi, M.4
Yokota, A.5
-
65
-
-
63449139555
-
Nitriliruptor alkaliphilus gen. nov., sp. nov., a deep-lineage haloalkaliphilic actinobacterium from soda lakes capable of growth on aliphatic nitriles, and proposal of Nitriliruptoraceae fam. nov. and Nitriliruptorales ord. nov
-
Sorokin DY, van Pelt S, Tourova TP, Evtushenko LI, (2009) Nitriliruptor alkaliphilus gen. nov., sp. nov., a deep-lineage haloalkaliphilic actinobacterium from soda lakes capable of growth on aliphatic nitriles, and proposal of Nitriliruptoraceae fam. nov. and Nitriliruptorales ord. nov. Int J Syst Evol Microbiol 59: 248-253.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 248-253
-
-
Sorokin, D.Y.1
van Pelt, S.2
Tourova, T.P.3
Evtushenko, L.I.4
-
66
-
-
77954099753
-
Seasonal dynamics of bacterial biofilms on the kelp Laminaria hyperborea
-
Bengtsson MM, Sjøtun K, Øvreås L, (2010) Seasonal dynamics of bacterial biofilms on the kelp Laminaria hyperborea. Aquatic Microbial Ecology 60: 71-83.
-
(2010)
Aquatic Microbial Ecology
, vol.60
, pp. 71-83
-
-
Bengtsson, M.M.1
Sjøtun, K.2
Øvreås, L.3
-
67
-
-
34547800097
-
Pyrosequencing enumerates and contrasts soil microbial diversity
-
Roesch LFW, Fulthorpe RR, Riva A, Casella G, Hadwin AKM, et al. (2007) Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 1: 283-290.
-
(2007)
ISME J
, vol.1
, pp. 283-290
-
-
Roesch, L.F.W.1
Fulthorpe, R.R.2
Riva, A.3
Casella, G.4
Hadwin, A.K.M.5
-
68
-
-
84871267880
-
Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea
-
Bengtsson MM, Sjotun K, Lanzen A, Ovreas L (2012) Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea. ISME J.
-
(2012)
ISME J
-
-
Bengtsson, M.M.1
Sjotun, K.2
Lanzen, A.3
Ovreas, L.4
-
69
-
-
84866065801
-
Groundtruthing Next-Gen Sequencing for Microbial Ecology - Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing
-
Lee CK, Herbold CW, Polson SW, Wommack KE, Williamson SJ, et al. (2012) Groundtruthing Next-Gen Sequencing for Microbial Ecology- Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing. PLoS ONE 7: e44224.
-
(2012)
PLoS ONE
, vol.7
-
-
Lee, C.K.1
Herbold, C.W.2
Polson, S.W.3
Wommack, K.E.4
Williamson, S.J.5
-
70
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R, (2011) UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27: 2194-2200.
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
71
-
-
84859945291
-
Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community
-
Radax R, Rattei T, Lanzen A, Bayer C, Rapp HT, et al. (2012) Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community. Environmental Microbiology 14: 1308-1324.
-
(2012)
Environmental Microbiology
, vol.14
, pp. 1308-1324
-
-
Radax, R.1
Rattei, T.2
Lanzen, A.3
Bayer, C.4
Rapp, H.T.5
-
72
-
-
78651323093
-
Rfam: Wikipedia, clans and the "decimal" release
-
Gardner PP, Daub J, Tate J, Moore BL, Osuch IH, et al. (2011) Rfam: Wikipedia, clans and the "decimal" release. Nucleic Acids Res 39: D141-D145.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.3
Moore, B.L.4
Osuch, I.H.5
-
74
-
-
34347388470
-
UniRef: comprehensive and non-redundant UniProt reference clusters
-
Suzek BE, Huang H, McGarvey P, Mazumder R, Wu CH, (2007) UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics 23: 1282-1288.
-
(2007)
Bioinformatics
, vol.23
, pp. 1282-1288
-
-
Suzek, B.E.1
Huang, H.2
McGarvey, P.3
Mazumder, R.4
Wu, C.H.5
-
75
-
-
84863304598
-
-
R Development Core Team, Vienna, Austria: R Foundation for Statistical Computing
-
R Development Core Team (2012) R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing.
-
(2012)
R: A Language and Environment for Statistical Computing
-
-
-
76
-
-
70349255569
-
-
Oksanen J, Blanchet F, Kindt R, Legendre P, Minchin P, et al. (2012) vegan: Community Ecology Package.
-
(2012)
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Blanchet, F.2
Kindt, R.3
Legendre, P.4
Minchin, P.5
-
77
-
-
36248952964
-
Molecular analyses of microbial diversity associated with the Lonar soda lake in India: an impact crater in a basalt area
-
Wani AA, Surakasi VP, Siddharth J, Raghavan RG, Patole MS, et al. (2006) Molecular analyses of microbial diversity associated with the Lonar soda lake in India: an impact crater in a basalt area. Res Microbiol 157: 928-937.
-
(2006)
Res Microbiol
, vol.157
, pp. 928-937
-
-
Wani, A.A.1
Surakasi, V.P.2
Siddharth, J.3
Raghavan, R.G.4
Patole, M.S.5
-
78
-
-
77954401342
-
Sulfidogenesis under extremely haloalkaline conditions in soda lakes of Kulunda Steppe (Altai, Russia)
-
Sorokin DY, Rusanov II, Pimenov NV, Tourova TP, Abbas B, et al. (2010) Sulfidogenesis under extremely haloalkaline conditions in soda lakes of Kulunda Steppe (Altai, Russia). FEMS Microbiol Ecol 73: 278-290.
-
(2010)
FEMS Microbiol Ecol
, vol.73
, pp. 278-290
-
-
Sorokin, D.Y.1
Rusanov, I.I.2
Pimenov, N.V.3
Tourova, T.P.4
Abbas, B.5
-
79
-
-
33645454951
-
Planktonic microbial community composition across steep physical/chemical gradients in permanently ice-covered Lake Bonney, Antarctica
-
Glatz RE, Lepp PW, Ward BB, Francis CA, (2006) Planktonic microbial community composition across steep physical/chemical gradients in permanently ice-covered Lake Bonney, Antarctica. Geobiology 4: 53-67.
-
(2006)
Geobiology
, vol.4
, pp. 53-67
-
-
Glatz, R.E.1
Lepp, P.W.2
Ward, B.B.3
Francis, C.A.4
-
80
-
-
77953441893
-
[Bacterial diversity in Zabuye salt lake of tibet by culture-independent approaches]
-
Zhang X, Kong F, (2010) [Bacterial diversity in Zabuye salt lake of tibet by culture-independent approaches]. Wei Sheng Wu Xue Bao 50: 334-341.
-
(2010)
Wei Sheng Wu Xue Bao
, vol.50
, pp. 334-341
-
-
Zhang, X.1
Kong, F.2
-
81
-
-
70349990012
-
Seasonal changes in bacterial diversity in the Salton Sea
-
Dillon J, McMath L, Trout A, (2009) Seasonal changes in bacterial diversity in the Salton Sea. Hydrobiologia 632: 49-64.
-
(2009)
Hydrobiologia
, vol.632
, pp. 49-64
-
-
Dillon, J.1
McMath, L.2
Trout, A.3
-
82
-
-
67149131585
-
Archaeal diversity and the prevalence of Crenarchaeota in salt marsh sediments
-
Nelson KA, Moin NS, Bernhard AE, (2009) Archaeal diversity and the prevalence of Crenarchaeota in salt marsh sediments. Appl Environ Microbiol 75: 4211-4215.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4211-4215
-
-
Nelson, K.A.1
Moin, N.S.2
Bernhard, A.E.3
-
83
-
-
44649171625
-
Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat
-
Kunin V, Raes J, Harris JK, Spear JR, Walker JJ, et al. (2008) Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat. Mol Syst Biol 4: 198.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 198
-
-
Kunin, V.1
Raes, J.2
Harris, J.K.3
Spear, J.R.4
Walker, J.J.5
-
84
-
-
48749125472
-
It's all relative: ranking the diversity of aquatic bacterial communities
-
Shaw AK, Halpern AL, Beeson K, Tran B, Venter JC, et al. (2008) It's all relative: ranking the diversity of aquatic bacterial communities. Environ Microbiol 10: 2200-2210.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2200-2210
-
-
Shaw, A.K.1
Halpern, A.L.2
Beeson, K.3
Tran, B.4
Venter, J.C.5
-
85
-
-
84864124289
-
Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India
-
Yousuf B, Sanadhya P, Keshri J, Jha B, (2012) Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India. BMC Microbiol 12: 150.
-
(2012)
BMC Microbiol
, vol.12
, pp. 150
-
-
Yousuf, B.1
Sanadhya, P.2
Keshri, J.3
Jha, B.4
|