An improved workflow for identifying ubiquitin/ubiquitin-like protein conjugation sites from tandem mass spectra

Proteomics

Volumn 13, Issue 17, 2013, Pages 2579-2584

  Xu, Changming ^a   Zhang, Jiyang ^a   Zhang, Wei ^a   Liu, Hui ^a   Fang, Jianwei ^a   Xie, Hongwei ^a  

^a NATIONAL UNIVERSITY OF DEFENSE TECHNOLOGY   (China)

Author keywords

Bioinformatics; Tandem mass spectra; Ubiquitin; Ubiquitin like proteins; Workflow

Indexed keywords

AMINO ACID; LYSINE; NEDD8 PROTEIN; NUCLEOPORIN; POLYPEPTIDE; PROTEIN KINASE; SUMO PROTEIN; UBIQUITIN; UBIQUITIN LIKE PROTEIN; UNCLASSIFIED DRUG;

ACCURACY; AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; COMPUTER PROGRAM; CROSS LINKING; MASS SPECTROMETRY; NUCLEOTIDE SEQUENCE; PEPTIDE ANALYSIS; PEPTIDE SPECTRUM MATCH; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEOMICS; SCORING SYSTEM; TANDEM MASS SPECTROMETRY; UBIQUITINATION; WORKFLOW;

BIOINFORMATICS; TANDEM MASS SPECTRA; UBIQUITIN; UBIQUITIN-LIKE PROTEINS; WORKFLOW;

BINDING SITES; DATABASES, PROTEIN; PROTEIN BINDING; PROTOZOAN PROTEINS; SEQUENCE ANALYSIS, PROTEIN; SMALL UBIQUITIN-RELATED MODIFIER PROTEINS; SOFTWARE; TANDEM MASS SPECTROMETRY; TRYPANOSOMA CRUZI; UBIQUITIN; WORKFLOW;

EID: 84883297125     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201300151     Document Type: Article

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