Virmid: Accurate detection of somatic mutations with sample impurity inference

Genome Biology

Volumn 14, Issue 8, 2013, Pages

  Kim, Sangwoo ^a   Jeong, Kyowon ^b   Bhutani, Kunal ^a   Lee, Jeong H ^c,f   Patel, Anand ^a   Scott, Eric ^c   Nam, Hojung ^d   Lee, Hayan ^e   Gleeson, Joseph G ^c   Bafna, Vineet ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d Gwangju Institute of Science and Technology (GIST)   (South Korea)

^e Stony Brook University   (United States)

^f Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ALEXANDER DISEASE; ARTICLE; BREAST CANCER; COMPUTER PROGRAM; CONTROLLED STUDY; GENE FREQUENCY; MUTATIONAL ANALYSIS; NEOPLASM; PROBABILITY MODEL; SAMPLE (STATISTICS); SIMULATION; SOMATIC MUTATION; STATISTICAL MODEL; VIRMID; VIRTUAL MICRODISSECTION FOR VARIANT CALLING; ALLELE; BREAST NEOPLASMS; EXOME; FEMALE; GENETICS; HEMIMEGALENCEPHALY; HIGH THROUGHPUT SEQUENCING; HUMAN; MUTATION; TUMOR MICROENVIRONMENT;

TUMOR PROTEIN;

ALLELES; BREAST NEOPLASMS; EXOME; FEMALE; GENE FREQUENCY; HEMIMEGALENCEPHALY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; LIKELIHOOD FUNCTIONS; MUTATION; NEOPLASM PROTEINS; SOFTWARE; TUMOR MICROENVIRONMENT;

EID: 84883063871     PISSN: None     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2013-14-8-r90     Document Type: Article

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