메뉴 건너뛰기




Volumn 28, Issue 17, 2012, Pages 2265-2266

Purityest: Estimating purity of human tumor samples using next-generation sequencing data

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ALLELE; ARTICLE; BIOLOGICAL MODEL; DNA SEQUENCE; GENETICS; HETEROZYGOTE; HUMAN; METHODOLOGY; NEOPLASM; NUCLEOTIDE SEQUENCE; PATHOLOGY;

EID: 84865558202     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts365     Document Type: Article
Times cited : (55)

References (10)
  • 1
    • 77951996044 scopus 로고    scopus 로고
    • TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays
    • Bengtsson, H. et al. (2010) TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays. BMC Bioinformatics, 11, 1471-2105.
    • (2010) BMC Bioinformatics , vol.11 , pp. 1471-2105
    • Bengtsson, H.1
  • 2
    • 79951497419 scopus 로고    scopus 로고
    • The genomic complexity of primary human prostate cancer
    • Berger, M.F. et al. (2011) The genomic complexity of primary human prostate cancer. Nature, 470, 214-220.
    • (2011) Nature , vol.470 , pp. 214-220
    • Berger, M.F.1
  • 3
    • 84860782006 scopus 로고    scopus 로고
    • Absolute quantification of somatic DNA alterations in human cancer
    • Carter, S.L. et al. (2012) Absolute quantification of somatic DNA alterations in human cancer. Nat. Biotech, 30, 413-421.
    • (2012) Nat. Biotech , vol.30 , pp. 413-421
    • Carter, S.L.1
  • 4
    • 84855185866 scopus 로고    scopus 로고
    • Correcting for cancer genome size and tumor cell content enables better estimation of copy number alterations from next-generation sequence data
    • Gusnanto, A. et al. (2011) Correcting for cancer genome size and tumor cell content enables better estimation of copy number alterations from next-generation sequence data. Bioinformatics, 28, 40-47.
    • (2011) Bioinformatics , vol.28 , pp. 40-47
    • Gusnanto, A.1
  • 5
    • 38749149152 scopus 로고    scopus 로고
    • Whole-genome sequencing and variant discovery in C
    • Hiller, L.W. et al. (2008) Whole-genome sequencing and variant discovery in C. elegans. Nat. Methods, 5, 183-188.
    • (2008) elegans. Nat. Methods , vol.5 , pp. 183-188
    • Hiller, L.W.1
  • 6
    • 78049248432 scopus 로고    scopus 로고
    • Allele-specific copy number analysis of tumors
    • Loo, P.V. et al. (2010) Allele-specific copy number analysis of tumors. PNAS, 107, 16910-16915.
    • (2010) PNAS , vol.107 , pp. 16910-16915
    • Loo, P.V.1
  • 7
    • 0032706623 scopus 로고    scopus 로고
    • A general approach to single-nucleotide polymorphism discovery
    • Marth, G.T. et al. (1999) A general approach to single-nucleotide polymorphism discovery. Nat. Genet., 23, 452-456.
    • (1999) Nat. Genet. , vol.23 , pp. 452-456
    • Marth, G.T.1
  • 8
    • 0020750980 scopus 로고
    • Percentage points for a generalized ESD many outlier procedure
    • Rosner, B. (1983) Percentage points for a generalized ESD many outlier procedure. Technometrics, 25, 165-172.
    • (1983) Technometrics , vol.25 , pp. 165-172
    • Rosner, B.1
  • 9
    • 70449418416 scopus 로고    scopus 로고
    • Integrated study of copy number states and genotype calls using high-density SNP arrays
    • Sun, W. et al. (2009) Integrated study of copy number states and genotype calls using high-density SNP arrays. Nucleic Acids Res., 37, 5365-5377.
    • (2009) Nucleic Acids Res , vol.37 , pp. 5365-5377
    • Sun, W.1
  • 10
    • 79957859881 scopus 로고    scopus 로고
    • BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data
    • Yu, G. et al. (2011) BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data. Bioinformatics, 27, 1473-1480.
    • (2011) Bioinformatics , vol.27 , pp. 1473-1480
    • Yu, G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.