-
1
-
-
84862514523
-
Variation in endogenous oxidative stress in Escherichia coli natural isolates during growth in urine
-
Aubron C, Glodt J, Matar C, Huet O, Borderie D, Dobrindt U, Duranteau J, Denamur E, Conti M, Bouvet O. 2012. Variation in endogenous oxidative stress in Escherichia coli natural isolates during growth in urine. BMC Microbiol 12:120.
-
(2012)
BMC Microbiol
, vol.12
, pp. 120
-
-
Aubron, C.1
Glodt, J.2
Matar, C.3
Huet, O.4
Borderie, D.5
Dobrindt, U.6
Duranteau, J.7
Denamur, E.8
Conti, M.9
Bouvet, O.10
-
2
-
-
0021271427
-
The control of accuracy during protein synthesis in Escherichia coli and perturbations of this control by streptomycin, neomycin, or ribosomal mutations
-
Brakier-Gingras L, Phoenix P. 1984. The control of accuracy during protein synthesis in Escherichia coli and perturbations of this control by streptomycin, neomycin, or ribosomal mutations. Can J Biochem Cell Biol 62:231-244.
-
(1984)
Can J Biochem Cell Biol
, vol.62
, pp. 231-244
-
-
Brakier-Gingras, L.1
Phoenix, P.2
-
3
-
-
79952017981
-
Transcriptional mutagenesis: Causes and involvement in tumour development
-
Bregeon D, Doetsch PW. 2011. Transcriptional mutagenesis: Causes and involvement in tumour development. Nat Rev Cancer 11:218-227.
-
(2011)
Nat Rev Cancer
, vol.11
, pp. 218-227
-
-
Bregeon, D.1
Doetsch, P.W.2
-
4
-
-
2442590835
-
Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli
-
Bregeon D, Doddridge ZA, You HJ, Weiss B, Doetsch PW. 2003. Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli. Mol Cell 12:959-970.
-
(2003)
Mol Cell
, vol.12
, pp. 959-970
-
-
Bregeon, D.1
Doddridge, Z.A.2
You, H.J.3
Weiss, B.4
Doetsch, P.W.5
-
5
-
-
33846980409
-
CPD damage recognition by transcribing RNA polymerase II
-
Brueckner F, Hennecke U, Carell T, Cramer P. 2007. CPD damage recognition by transcribing RNA polymerase II. Science 315:859-862.
-
(2007)
Science
, vol.315
, pp. 859-862
-
-
Brueckner, F.1
Hennecke, U.2
Carell, T.3
Cramer, P.4
-
6
-
-
33751559420
-
RNA polymerase II bypass of oxidative DNA damage is regulated by transcription elongation factors
-
Charlet-Berguerand N, Feuerhahn S, Kong SE, Ziserman H, Conaway JW, Conaway R, Egly JM. 2006. RNA polymerase II bypass of oxidative DNA damage is regulated by transcription elongation factors. EMBO J 25:5481-5491.
-
(2006)
EMBO J
, vol.25
, pp. 5481-5491
-
-
Charlet-Berguerand, N.1
Feuerhahn, S.2
Kong, S.E.3
Ziserman, H.4
Conaway, J.W.5
Conaway, R.6
Egly, J.M.7
-
7
-
-
77649254580
-
Abasic sites and strand breaks in DNA cause transcriptional mutagenesis in Escherichia coli
-
Clauson CL, Oestreich KJ, Austin JW, Doetsch PW. 2010. Abasic sites and strand breaks in DNA cause transcriptional mutagenesis in Escherichia coli. Proc Natl Acad Sci USA 107:3657-3662.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 3657-3662
-
-
Clauson, C.L.1
Oestreich, K.J.2
Austin, J.W.3
Doetsch, P.W.4
-
8
-
-
70350065725
-
Disorders of nucleotide excision repair: The genetic and molecular basis of heterogeneity
-
Cleaver JE, Lam ET, Revet I. 2009. Disorders of nucleotide excision repair: The genetic and molecular basis of heterogeneity. Nat Rev Genet 10:756-768.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 756-768
-
-
Cleaver, J.E.1
Lam, E.T.2
Revet, I.3
-
9
-
-
70450260475
-
Molecular basis of transcriptional mutagenesis at 8-oxoguanine
-
Damsma GE, Cramer P. 2009. Molecular basis of transcriptional mutagenesis at 8-oxoguanine. J Biol Chem 284:31658-31663.
-
(2009)
J Biol Chem
, vol.284
, pp. 31658-31663
-
-
Damsma, G.E.1
Cramer, P.2
-
10
-
-
36849078192
-
Mechanism of transcriptional stalling at cisplatin-damaged DNA
-
Damsma GE, Alt A, Brueckner F, Carell T, Cramer P. 2007. Mechanism of transcriptional stalling at cisplatin-damaged DNA. Nat Struct Mol Biol 14:1127-1133.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 1127-1133
-
-
Damsma, G.E.1
Alt, A.2
Brueckner, F.3
Carell, T.4
Cramer, P.5
-
11
-
-
79959827651
-
Trade-off between bile resistance and nutritional competence drives Escherichia coli diversification in the mouse gut
-
De Paepe M, Gaboriau-Routhiau V, Rainteau D, Rakotobe S, Taddei F, Cerf-Bensussan N. 2011. Trade-off between bile resistance and nutritional competence drives Escherichia coli diversification in the mouse gut. PLoS Genet 7:e1002107.
-
(2011)
PLoS Genet
, vol.7
-
-
De Paepe, M.1
Gaboriau-Routhiau, V.2
Rainteau, D.3
Rakotobe, S.4
Taddei, F.5
Cerf-Bensussan, N.6
-
12
-
-
0037196071
-
Translesion synthesis by RNA polymerases: Occurrence and biological implications for transcriptional mutagenesis
-
Doetsch PW. 2002. Translesion synthesis by RNA polymerases: Occurrence and biological implications for transcriptional mutagenesis. Mutat Res 510:131-140.
-
(2002)
Mutat Res
, vol.510
, pp. 131-140
-
-
Doetsch, P.W.1
-
13
-
-
0025786078
-
Oxidative stress responses in Escherichia coli and Salmonella typhimurium
-
Farr SB, Kogoma T. 1991. Oxidative stress responses in Escherichia coli and Salmonella typhimurium. Microbiol Rev 55:561-585.
-
(1991)
Microbiol Rev
, vol.55
, pp. 561-585
-
-
Farr, S.B.1
Kogoma, T.2
-
14
-
-
84874982713
-
Ovarian surface epithelium at the junction area contains a cancer-prone stem cell niche
-
Flesken-Nikitin A, Hwang CI, Cheng CY, Michurina TV, Enikolopov G, Nikitin AY. 2013. Ovarian surface epithelium at the junction area contains a cancer-prone stem cell niche. Nature 495:241-245.
-
(2013)
Nature
, vol.495
, pp. 241-245
-
-
Flesken-Nikitin, A.1
Hwang, C.I.2
Cheng, C.Y.3
Michurina, T.V.4
Enikolopov, G.5
Nikitin, A.Y.6
-
15
-
-
33746488809
-
DNA repair: From molecular mechanism to human disease
-
Friedberg EC, Aguilera A, Gellert M, Hanawalt PC, Hays JB, Lehmann AR, Lindahl T, Lowndes N, Sarasin A, Wood RD. 2006. DNA repair: From molecular mechanism to human disease. DNA Repair (Amst) 5:986-996.
-
(2006)
DNA Repair (Amst)
, vol.5
, pp. 986-996
-
-
Friedberg, E.C.1
Aguilera, A.2
Gellert, M.3
Hanawalt, P.C.4
Hays, J.B.5
Lehmann, A.R.6
Lindahl, T.7
Lowndes, N.8
Sarasin, A.9
Wood, R.D.10
-
16
-
-
84856233300
-
Balancing repair and tolerance of DNA damage caused by alkylating agents
-
Fu D, Calvo JA, Samson LD. 2012. Balancing repair and tolerance of DNA damage caused by alkylating agents. Nat Rev Cancer 12:104-120.
-
(2012)
Nat Rev Cancer
, vol.12
, pp. 104-120
-
-
Fu, D.1
Calvo, J.A.2
Samson, L.D.3
-
17
-
-
61349148091
-
Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network
-
Gordon AJ, Halliday JA, Blankschien MD, Burns PA, Yatagai F, Herman C. 2009. Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network. PLoS Biol 7:e44.
-
(2009)
PLoS Biol
, vol.7
-
-
Gordon, A.J.1
Halliday, J.A.2
Blankschien, M.D.3
Burns, P.A.4
Yatagai, F.5
Herman, C.6
-
18
-
-
33947101019
-
Patterns of somatic mutation in human cancer genomes
-
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, Bignell G, Davies H, Teague J, Butler A, Stevens C, Edkins S, O'Meara S, Vastrik I, Schmidt EE, Avis T, Barthorpe S, Bhamra G, Buck G, Choudhury B, Clements J, Cole J, Dicks E, Forbes S, Gray K, Halliday K, Harrison R, Hills K, Hinton J, Jenkinson A, Jones D, Menzies A, Mironenko T, Perry J, Raine K, Richardson D, Shepherd R, Small A, Tofts C, Varian J, Webb T, West S, Widaa S, Yates A, Cahill DP, Louis DN, Goldstraw P, Nicholson AG, Brasseur F, Looijenga L, Weber BL, Chiew YE, DeFazio A, Greaves MF, Green AR, Campbell P, Birney E, Easton DF, Chenevix-Trench G, Tan MH, Khoo SK, Teh BT, Yuen ST, Leung SY, Wooster R, Futreal PA, Stratton MR. 2007. Patterns of somatic mutation in human cancer genomes. Nature 446:153-158.
-
(2007)
Nature
, vol.446
, pp. 153-158
-
-
Greenman, C.1
Stephens, P.2
Smith, R.3
Dalgliesh, G.L.4
Hunter, C.5
Bignell, G.6
Davies, H.7
Teague, J.8
Butler, A.9
Stevens, C.10
Edkins, S.11
O'Meara, S.12
Vastrik, I.13
Schmidt, E.E.14
Avis, T.15
Barthorpe, S.16
Bhamra, G.17
Buck, G.18
Choudhury, B.19
Clements, J.20
Cole, J.21
Dicks, E.22
Forbes, S.23
Gray, K.24
Halliday, K.25
Harrison, R.26
Hills, K.27
Hinton, J.28
Jenkinson, A.29
Jones, D.30
Menzies, A.31
Mironenko, T.32
Perry, J.33
Raine, K.34
Richardson, D.35
Shepherd, R.36
Small, A.37
Tofts, C.38
Varian, J.39
Webb, T.40
West, S.41
Widaa, S.42
Yates, A.43
Cahill, D.P.44
Louis, D.N.45
Goldstraw, P.46
Nicholson, A.G.47
Brasseur, F.48
Looijenga, L.49
Weber, B.L.50
Chiew, Y.E.51
DeFazio, A.52
Greaves, M.F.53
Green, A.R.54
Campbell, P.55
Birney, E.56
Easton, D.F.57
Chenevix-Trench, G.58
Tan, M.H.59
Khoo, S.K.60
Teh, B.T.61
Yuen, S.T.62
Leung, S.Y.63
Wooster, R.64
Futreal, P.A.65
Stratton, M.R.66
more..
-
19
-
-
79952284127
-
Hallmarks of cancer: The next generation
-
Hanahan D, Weinberg RA. 2011. Hallmarks of cancer: The next generation. Cell 144:646-674.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
20
-
-
0028118111
-
Tumor spectrum analysis in p53-mutant mice
-
Jacks T, Remington L, Williams BO, Schmitt EM, Halachmi S, Bronson RT, Weinberg RA. 1994. Tumor spectrum analysis in p53-mutant mice. Curr Biol 4:1-7.
-
(1994)
Curr Biol
, vol.4
, pp. 1-7
-
-
Jacks, T.1
Remington, L.2
Williams, B.O.3
Schmitt, E.M.4
Halachmi, S.5
Bronson, R.T.6
Weinberg, R.A.7
-
21
-
-
84874720377
-
Killing by bactericidal antibiotics does not depend on reactive oxygen species
-
Keren I, Wu Y, Inocencio J, Mulcahy LR, Lewis K. 2013. Killing by bactericidal antibiotics does not depend on reactive oxygen species. Science 339:1213-1216.
-
(2013)
Science
, vol.339
, pp. 1213-1216
-
-
Keren, I.1
Wu, Y.2
Inocencio, J.3
Mulcahy, L.R.4
Lewis, K.5
-
22
-
-
20444397431
-
Identification of bronchioalveolar stem cells in normal lung and lung cancer
-
Kim CF, Jackson EL, Woolfenden AE, Lawrence S, Babar I, Vogel S, Crowley D, Bronson RT, Jacks T. 2005. Identification of bronchioalveolar stem cells in normal lung and lung cancer. Cell 121:823-835.
-
(2005)
Cell
, vol.121
, pp. 823-835
-
-
Kim, C.F.1
Jackson, E.L.2
Woolfenden, A.E.3
Lawrence, S.4
Babar, I.5
Vogel, S.6
Crowley, D.7
Bronson, R.T.8
Jacks, T.9
-
23
-
-
79961209184
-
8-Oxo-7,8-dihydroguanine in DNA does not constitute a barrier to transcription, but is converted into transcription-blocking damage by OGG1
-
Kitsera N, Stathis D, Luhnsdorf B, Muller H, Carell T, Epe B, Khobta A. 2011. 8-Oxo-7, 8-dihydroguanine in DNA does not constitute a barrier to transcription, but is converted into transcription-blocking damage by OGG1. Nucleic Acids Res 39:5926-5934.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 5926-5934
-
-
Kitsera, N.1
Stathis, D.2
Luhnsdorf, B.3
Muller, H.4
Carell, T.5
Epe, B.6
Khobta, A.7
-
24
-
-
75949092532
-
Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis
-
Kohanski MA, DePristo MA, Collins JJ. 2010. Sublethal antibiotic treatment leads to multidrug resistance via radical-induced mutagenesis. Mol Cell 37:311-320.
-
(2010)
Mol Cell
, vol.37
, pp. 311-320
-
-
Kohanski, M.A.1
DePristo, M.A.2
Collins, J.J.3
-
25
-
-
0032052252
-
Escherichia coli RNA and DNA polymerase bypass of dihydrouracil: Mutagenic potential via transcription and replication
-
Liu J, Doetsch PW. 1998. Escherichia coli RNA and DNA polymerase bypass of dihydrouracil: Mutagenic potential via transcription and replication. Nucleic Acids Res 26:1707-1712.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 1707-1712
-
-
Liu, J.1
Doetsch, P.W.2
-
26
-
-
0028807735
-
RNA polymerase bypass at sites of dihydrouracil: Implications for transcriptional mutagenesis
-
Liu J, Zhou W, Doetsch PW. 1995. RNA polymerase bypass at sites of dihydrouracil: Implications for transcriptional mutagenesis. Mol Cell Biol 15:6729-6735.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 6729-6735
-
-
Liu, J.1
Zhou, W.2
Doetsch, P.W.3
-
27
-
-
84871793703
-
Effects of DNA lesions on the transcription reaction of mitochondrial RNA polymerase: Implications for bypass RNA synthesis on oxidative DNA lesions
-
Nakanishi N, Fukuoh A, Kang D, Iwai S, Kuraoka I. 2013. Effects of DNA lesions on the transcription reaction of mitochondrial RNA polymerase: Implications for bypass RNA synthesis on oxidative DNA lesions. Mutagenesis 28:117-123.
-
(2013)
Mutagenesis
, vol.28
, pp. 117-123
-
-
Nakanishi, N.1
Fukuoh, A.2
Kang, D.3
Iwai, S.4
Kuraoka, I.5
-
28
-
-
84867530234
-
Monitoring bypass of single replication-blocking lesions by damage avoidance in the Escherichia coli chromosome
-
Pages V, Mazon G, Naiman K, Philippin G, Fuchs RP. 2012. Monitoring bypass of single replication-blocking lesions by damage avoidance in the Escherichia coli chromosome. Nucleic Acids Res 40:9036-9043.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 9036-9043
-
-
Pages, V.1
Mazon, G.2
Naiman, K.3
Philippin, G.4
Fuchs, R.P.5
-
29
-
-
80052652284
-
Effect of growth under selection on appearance of chromosomal mutations in Salmonella enterica
-
Quinones-Soto S, Roth JR. 2011. Effect of growth under selection on appearance of chromosomal mutations in Salmonella enterica. Genetics 189:37-53.
-
(2011)
Genetics
, vol.189
, pp. 37-53
-
-
Quinones-Soto, S.1
Roth, J.R.2
-
30
-
-
57749121608
-
8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells
-
Saxowsky TT, Meadows KL, Klungland A, Doetsch PW. 2008. 8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells. Proc Natl Acad Sci USA 105:18877-18882.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 18877-18882
-
-
Saxowsky, T.T.1
Meadows, K.L.2
Klungland, A.3
Doetsch, P.W.4
-
31
-
-
0030879766
-
Counteraction by MutT protein of transcriptional errors caused by oxidative damage
-
Taddei F, Hayakawa H, Bouton M, Cirinesi A, Matic I, Sekiguchi M, Radman M. 1997. Counteraction by MutT protein of transcriptional errors caused by oxidative damage. Science 278:128-130.
-
(1997)
Science
, vol.278
, pp. 128-130
-
-
Taddei, F.1
Hayakawa, H.2
Bouton, M.3
Cirinesi, A.4
Matic, I.5
Sekiguchi, M.6
Radman, M.7
-
32
-
-
58649089374
-
Defects in the error prevention oxidized guanine system potentiate stationary-phase mutagenesis in Bacillus subtilis
-
Vidales LE, Cardenas LC, Robleto E, Yasbin RE, Pedraza-Reyes M. 2009. Defects in the error prevention oxidized guanine system potentiate stationary-phase mutagenesis in Bacillus subtilis. J Bacteriol 191:506-513.
-
(2009)
J Bacteriol
, vol.191
, pp. 506-513
-
-
Vidales, L.E.1
Cardenas, L.C.2
Robleto, E.3
Yasbin, R.E.4
Pedraza-Reyes, M.5
-
33
-
-
0032516880
-
Effects of nonbulky DNA base damages on Escherichia coli RNA polymerase-mediated elongation and promoter clearance
-
Viswanathan A, Doetsch PW. 1998. Effects of nonbulky DNA base damages on Escherichia coli RNA polymerase-mediated elongation and promoter clearance. J Biol Chem 273:21276-21281.
-
(1998)
J Biol Chem
, vol.273
, pp. 21276-21281
-
-
Viswanathan, A.1
Doetsch, P.W.2
-
34
-
-
0032769386
-
E. coli RNA polymerase bypass of DNA base damage. Mutagenesis at the level of transcription
-
Viswanathan A, Liu J, Doetsch PW. 1999a. E. coli RNA polymerase bypass of DNA base damage. Mutagenesis at the level of transcription. Ann N Y Acad Sci 870:386-388.
-
(1999)
Ann N Y Acad Sci
, vol.870
, pp. 386-388
-
-
Viswanathan, A.1
Liu, J.2
Doetsch, P.W.3
-
35
-
-
0345379628
-
Phenotypic change caused by transcriptional bypass of uracil in nondividing cells
-
Viswanathan A, You HJ, Doetsch PW. 1999b. Phenotypic change caused by transcriptional bypass of uracil in nondividing cells. Science 284:159-162.
-
(1999)
Science
, vol.284
, pp. 159-162
-
-
Viswanathan, A.1
You, H.J.2
Doetsch, P.W.3
-
36
-
-
84859710196
-
Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage
-
Walmacq C, Cheung AC, Kireeva ML, Lubkowska L, Ye C, Gotte D, Strathern JN, Carell T, Cramer P, Kashlev M. 2012. Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage. Mol Cell 46:18-29.
-
(2012)
Mol Cell
, vol.46
, pp. 18-29
-
-
Walmacq, C.1
Cheung, A.C.2
Kireeva, M.L.3
Lubkowska, L.4
Ye, C.5
Gotte, D.6
Strathern, J.N.7
Carell, T.8
Cramer, P.9
Kashlev, M.10
-
37
-
-
84870296240
-
A quantitative assay for assessing the effects of DNA lesions on transcription
-
You C, Dai X, Yuan B, Wang J, Brooks PJ, Niedernhofer LJ, Wang Y. 2012a. A quantitative assay for assessing the effects of DNA lesions on transcription. Nat Chem Biol 8:817-822.
-
(2012)
Nat Chem Biol
, vol.8
, pp. 817-822
-
-
You, C.1
Dai, X.2
Yuan, B.3
Wang, J.4
Brooks, P.J.5
Niedernhofer, L.J.6
Wang, Y.7
-
38
-
-
84870342311
-
Effects of 6-thioguanine and s6-methylthioguanine on transcription in vitro and in human cells
-
You C, Dai X, Yuan B, Wang Y. 2012b. Effects of 6-thioguanine and s6-methylthioguanine on transcription in vitro and in human cells. J Biol Chem 287:40915-40923.
-
(2012)
J Biol Chem
, vol.287
, pp. 40915-40923
-
-
You, C.1
Dai, X.2
Yuan, B.3
Wang, Y.4
-
39
-
-
0027165306
-
Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases
-
Zhou W, Doetsch PW. 1993. Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases. Proc Natl Acad Sci USA 90:6601-6605.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6601-6605
-
-
Zhou, W.1
Doetsch, P.W.2
|