-
1
-
-
78049414227
-
Epigenetic reprogramming in plant and animal development
-
Feng S., Jacobsen S.E., Reik W. Epigenetic reprogramming in plant and animal development. Science 2010, 330:622-627.
-
(2010)
Science
, vol.330
, pp. 622-627
-
-
Feng, S.1
Jacobsen, S.E.2
Reik, W.3
-
2
-
-
77949874234
-
Histone variants-ancient wrap artists of the epigenome, Nature reviews
-
Talbert P.B., Henikoff S. Histone variants-ancient wrap artists of the epigenome, Nature reviews. Mol. Cell Biol. 2010, 11:264-275.
-
(2010)
Mol. Cell Biol.
, vol.11
, pp. 264-275
-
-
Talbert, P.B.1
Henikoff, S.2
-
3
-
-
79955112442
-
Histone variants and modifications in plant gene regulation
-
Deal R.B., Henikoff S. Histone variants and modifications in plant gene regulation. Curr. Opin. Plant Biol. 2011, 14:116-122.
-
(2011)
Curr. Opin. Plant Biol.
, vol.14
, pp. 116-122
-
-
Deal, R.B.1
Henikoff, S.2
-
4
-
-
67650725820
-
The biology of chromatin remodeling complexes
-
Clapier C.R., Cairns B.R. The biology of chromatin remodeling complexes. Annu. Rev. Biochem 2009, 78:273-304.
-
(2009)
Annu. Rev. Biochem
, vol.78
, pp. 273-304
-
-
Clapier, C.R.1
Cairns, B.R.2
-
6
-
-
4644242349
-
RNA silencing in plants
-
Baulcombe D. RNA silencing in plants. Nature 2004, 431:356-363.
-
(2004)
Nature
, vol.431
, pp. 356-363
-
-
Baulcombe, D.1
-
7
-
-
34249330696
-
Epigenetic inheritance in plants
-
Henderson I.R., Jacobsen S.E. Epigenetic inheritance in plants. Nature 2007, 447:418-424.
-
(2007)
Nature
, vol.447
, pp. 418-424
-
-
Henderson, I.R.1
Jacobsen, S.E.2
-
8
-
-
0002947085
-
The epigenotype
-
Waddington C.H. The epigenotype. Endeavour 1942, 1:18-20.
-
(1942)
Endeavour
, vol.1
, pp. 18-20
-
-
Waddington, C.H.1
-
9
-
-
64349095390
-
An operational definition of epigenetics
-
Berger S.L., Kouzarides T., Shiekhattar R., Shilatifard A. An operational definition of epigenetics. Genes & Development 2009, 23:781-783.
-
(2009)
Genes & Development
, vol.23
, pp. 781-783
-
-
Berger, S.L.1
Kouzarides, T.2
Shiekhattar, R.3
Shilatifard, A.4
-
11
-
-
0036929765
-
Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes
-
Pandey R., et al. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res. 2002, 30:5036-5055.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 5036-5055
-
-
Pandey, R.1
-
12
-
-
0029925512
-
Special HATs for special occasions: linking histone acetylation to chromatin assembly and gene activation
-
Brownell J.E., Allis C.D. Special HATs for special occasions: linking histone acetylation to chromatin assembly and gene activation. Current opinion in genetics & development 1996, 6:176-184.
-
(1996)
Current opinion in genetics & development
, vol.6
, pp. 176-184
-
-
Brownell, J.E.1
Allis, C.D.2
-
13
-
-
3042722019
-
Evolutionary changes in cis and trans gene regulation
-
Wittkopp P.J., Haerum B.K., Clark A.G. Evolutionary changes in cis and trans gene regulation. Nature 2004, 430:85-88.
-
(2004)
Nature
, vol.430
, pp. 85-88
-
-
Wittkopp, P.J.1
Haerum, B.K.2
Clark, A.G.3
-
14
-
-
84864834178
-
Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids
-
Shi X., et al. Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids. Nat. Commun. 2012, 3:950.
-
(2012)
Nat. Commun.
, vol.3
, pp. 950
-
-
Shi, X.1
-
15
-
-
84864679478
-
Widespread dynamic DNA methylation in response to biotic stress
-
Dowen R.H., et al. Widespread dynamic DNA methylation in response to biotic stress. Proc. Natl. Acad. Sci. U. S. A. 2012, 109:E2183-E2191.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
-
-
Dowen, R.H.1
-
17
-
-
0347717907
-
Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3
-
Sung S., Amasino R.M. Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3. Nature 2004, 427:159-164.
-
(2004)
Nature
, vol.427
, pp. 159-164
-
-
Sung, S.1
Amasino, R.M.2
-
18
-
-
0345826148
-
Vernalization requires epigenetic silencing of FLC by histone methylation
-
Bastow R., et al. Vernalization requires epigenetic silencing of FLC by histone methylation. Nature 2004, 427:164-167.
-
(2004)
Nature
, vol.427
, pp. 164-167
-
-
Bastow, R.1
-
19
-
-
34548715144
-
Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development
-
Dolinoy D.C., Huang D., Jirtle R.L. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:13056-13061.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 13056-13061
-
-
Dolinoy, D.C.1
Huang, D.2
Jirtle, R.L.3
-
20
-
-
33947310031
-
Environmental epigenomics and disease susceptibility
-
Jirtle R.L., Skinner M.K. Environmental epigenomics and disease susceptibility. Nat. Rev. Genet. 2007, 8:253-262.
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 253-262
-
-
Jirtle, R.L.1
Skinner, M.K.2
-
21
-
-
67149119197
-
Genome-wide demethylation of Arabidopsis endosperm
-
Hsieh T.F., et al. Genome-wide demethylation of Arabidopsis endosperm. Science 2009, 324:1451-1454.
-
(2009)
Science
, vol.324
, pp. 1451-1454
-
-
Hsieh, T.F.1
-
22
-
-
67149086996
-
Extensive demethylation of repetitive elements during seed development underlies gene imprinting
-
Gehring M., Bubb K.L., Henikoff S. Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science 2009, 324:1447-1451.
-
(2009)
Science
, vol.324
, pp. 1447-1451
-
-
Gehring, M.1
Bubb, K.L.2
Henikoff, S.3
-
23
-
-
39749196238
-
Cellular programming of plant gene imprinting
-
Huh J.H., Bauer M.J., Hsieh T.F., Fischer R.L. Cellular programming of plant gene imprinting. Cell 2008, 132:735-744.
-
(2008)
Cell
, vol.132
, pp. 735-744
-
-
Huh, J.H.1
Bauer, M.J.2
Hsieh, T.F.3
Fischer, R.L.4
-
24
-
-
0037354734
-
Arabidopsis MET1 cytosine methyltransferase mutants
-
Kankel M.W., et al. Arabidopsis MET1 cytosine methyltransferase mutants. Genetics 2003, 163:1109-1122.
-
(2003)
Genetics
, vol.163
, pp. 1109-1122
-
-
Kankel, M.W.1
-
25
-
-
0035874929
-
Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation
-
Lindroth A.M., et al. Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation. Science 2001, 292:2077-2080.
-
(2001)
Science
, vol.292
, pp. 2077-2080
-
-
Lindroth, A.M.1
-
26
-
-
0038670503
-
Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis
-
Saze H., Mittelsten Scheid O., Paszkowski J. Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat. Genet. 2003, 34:65-69.
-
(2003)
Nat. Genet.
, vol.34
, pp. 65-69
-
-
Saze, H.1
Mittelsten Scheid, O.2
Paszkowski, J.3
-
27
-
-
0021715393
-
The significance of responses of the genome to challenge
-
McClintock B. The significance of responses of the genome to challenge. Science 1984, 226:792-801.
-
(1984)
Science
, vol.226
, pp. 792-801
-
-
McClintock, B.1
-
28
-
-
0034065942
-
Genetic and epigenetic incompatibilities underlie hybrid dysgenesis in Peromyscus
-
Vrana P.B., et al. Genetic and epigenetic incompatibilities underlie hybrid dysgenesis in Peromyscus. Nat. Genet. 2000, 25:120-124.
-
(2000)
Nat. Genet.
, vol.25
, pp. 120-124
-
-
Vrana, P.B.1
-
29
-
-
70449588694
-
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
-
Ha M., et al. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:17835-17840.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 17835-17840
-
-
Ha, M.1
-
30
-
-
67650461957
-
Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis
-
Mosher R.A., et al. Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis. Nature 2009, 460:283-286.
-
(2009)
Nature
, vol.460
, pp. 283-286
-
-
Mosher, R.A.1
-
31
-
-
84862270547
-
MORC family ATPases required for heterochromatin condensation and gene silencing
-
Moissiard G., et al. MORC family ATPases required for heterochromatin condensation and gene silencing. Science 2012, 336:1448-1451.
-
(2012)
Science
, vol.336
, pp. 1448-1451
-
-
Moissiard, G.1
-
32
-
-
33845880624
-
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
-
Zilberman D., Gehring M., Tran R.K., Ballinger T., Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat. Genet. 2007, 39:61-69.
-
(2007)
Nat. Genet.
, vol.39
, pp. 61-69
-
-
Zilberman, D.1
Gehring, M.2
Tran, R.K.3
Ballinger, T.4
Henikoff, S.5
-
33
-
-
79952359976
-
Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks
-
Costas C., et al. Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks. Nat. Struct. Mol. Biol. 2011, 18:395-400.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 395-400
-
-
Costas, C.1
-
34
-
-
67650296444
-
ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing
-
Jacob Y., et al. ATXR5 and ATXR6 are H3K27 monomethyltransferases required for chromatin structure and gene silencing. Nat. Struct. Mol. Biol. 2009, 16:763-768.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 763-768
-
-
Jacob, Y.1
-
35
-
-
79953296447
-
Coordinated histone modifications are associated with gene expression variation within and between species
-
Ha M., Ng D.W., Li W.H., Chen Z.J. Coordinated histone modifications are associated with gene expression variation within and between species. Genome Res. 2011, 21:590-598.
-
(2011)
Genome Res.
, vol.21
, pp. 590-598
-
-
Ha, M.1
Ng, D.W.2
Li, W.H.3
Chen, Z.J.4
-
36
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl B.D., Allis C.D. The language of covalent histone modifications. Nature 2000, 403:41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
37
-
-
0035839136
-
Translating the histone code
-
Jenuwein T., Allis C.D. Translating the histone code. Science 2001, 293:1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
38
-
-
67650711619
-
Clustering approach for identification of enriched domains from histone modification ChIP-Seq data
-
Zang C., et al. clustering approach for identification of enriched domains from histone modification ChIP-Seq data. Bioinformatics 2009, 25:1952-1958.
-
(2009)
Bioinformatics
, vol.25
, pp. 1952-1958
-
-
Zang, C.1
-
39
-
-
82955167888
-
The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes
-
Bintu L. The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes. Nat. Struct. Mol. Biol. 2011.
-
(2011)
Nat. Struct. Mol. Biol.
-
-
Bintu, L.1
-
40
-
-
33847070442
-
The role of chromatin during transcription
-
Li B., Carey M., Workman J.L. The role of chromatin during transcription. Cell 2007, 128:707-719.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
41
-
-
84865331447
-
Genome-Wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis
-
Zhang W., Zhang T., Wu Y., Jiang J. Genome-Wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis. Plant Cell 2012, 24:2719-2731.
-
(2012)
Plant Cell
, vol.24
, pp. 2719-2731
-
-
Zhang, W.1
Zhang, T.2
Wu, Y.3
Jiang, J.4
-
42
-
-
79956066320
-
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
-
Roudier F., et al. Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J. 2011, 30:1928-1938.
-
(2011)
EMBO J.
, vol.30
, pp. 1928-1938
-
-
Roudier, F.1
-
43
-
-
77955925952
-
Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases
-
Jacob Y., et al. Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases. Nature 2010, 466:987-991.
-
(2010)
Nature
, vol.466
, pp. 987-991
-
-
Jacob, Y.1
-
44
-
-
67650091251
-
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
-
Zhang X., Bernatavichute Y.V., Cokus S., Pellegrini M., Jacobsen S.E. Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana. Genome Biol. 2009, 10:R62.
-
(2009)
Genome Biol.
, vol.10
-
-
Zhang, X.1
Bernatavichute, Y.V.2
Cokus, S.3
Pellegrini, M.4
Jacobsen, S.E.5
-
45
-
-
38949126530
-
Di- and Tri- but not monomethylation on Histone H3 Lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana
-
Xu L., et al. Di- and Tri- but not monomethylation on Histone H3 Lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana. Mol. Cell. Biol. 2008, 28:1348-1360.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 1348-1360
-
-
Xu, L.1
-
46
-
-
78049279221
-
Keeping cell identity in Arabidopsis requires PRC1 RING-finger homologs that catalyze H2A monoubiquitination
-
Bratzel F., Lopez-Torrejon G., Koch M., Del Pozo J.C., Calonje M. Keeping cell identity in Arabidopsis requires PRC1 RING-finger homologs that catalyze H2A monoubiquitination. Curr. Biol. 2010, 20:1853-1859.
-
(2010)
Curr. Biol.
, vol.20
, pp. 1853-1859
-
-
Bratzel, F.1
Lopez-Torrejon, G.2
Koch, M.3
Del Pozo, J.C.4
Calonje, M.5
-
47
-
-
77952403409
-
Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
-
Molnar A., et al. Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 2010, 328:872-875.
-
(2010)
Science
, vol.328
, pp. 872-875
-
-
Molnar, A.1
-
48
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
Wang Z., et al. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat. Genet. 2008, 40:897-903.
-
(2008)
Nat. Genet.
, vol.40
, pp. 897-903
-
-
Wang, Z.1
-
49
-
-
69449102464
-
Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
-
Wang Z., et al. Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell 2009, 138:1019-1031.
-
(2009)
Cell
, vol.138
, pp. 1019-1031
-
-
Wang, Z.1
-
50
-
-
65249148019
-
RNA-mediated chromatin-based silencing in plants
-
Matzke M., Kanno T., Daxinger L., Huettel B., Matzke A.J. RNA-mediated chromatin-based silencing in plants. Curr. Opin. Cell Biol. 2009, 21:367-376.
-
(2009)
Curr. Opin. Cell Biol.
, vol.21
, pp. 367-376
-
-
Matzke, M.1
Kanno, T.2
Daxinger, L.3
Huettel, B.4
Matzke, A.J.5
-
51
-
-
65249093731
-
An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein
-
He X.J., et al. An effector of RNA-directed DNA methylation in arabidopsis is an ARGONAUTE 4- and RNA-binding protein. Cell 2009, 137:498-508.
-
(2009)
Cell
, vol.137
, pp. 498-508
-
-
He, X.J.1
-
52
-
-
67349112845
-
RNA polymerase V transcription guides ARGONAUTE4 to chromatin
-
Wierzbicki A.T., Ream T.S., Haag J.R., Pikaard C.S. RNA polymerase V transcription guides ARGONAUTE4 to chromatin. Nat. Genet. 2009, 41:630-634.
-
(2009)
Nat. Genet.
, vol.41
, pp. 630-634
-
-
Wierzbicki, A.T.1
Ream, T.S.2
Haag, J.R.3
Pikaard, C.S.4
-
53
-
-
77954659099
-
Relationship between nucleosome positioning and DNA methylation
-
Chodavarapu R.K., et al. Relationship between nucleosome positioning and DNA methylation. Nature 2010, 466:388-392.
-
(2010)
Nature
, vol.466
, pp. 388-392
-
-
Chodavarapu, R.K.1
-
54
-
-
78649281582
-
Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis
-
Conerly M.L., et al. Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis. Genome Res. 2010, 20:1383-1390.
-
(2010)
Genome Res.
, vol.20
, pp. 1383-1390
-
-
Conerly, M.L.1
-
55
-
-
55549141877
-
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
-
Zilberman D., Coleman-Derr D., Ballinger T., Henikoff S. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature 2008, 456:125-129.
-
(2008)
Nature
, vol.456
, pp. 125-129
-
-
Zilberman, D.1
Coleman-Derr, D.2
Ballinger, T.3
Henikoff, S.4
-
56
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
-
Jin C., et al. H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions. Nat. Genet. 2009, 41:941-945.
-
(2009)
Nat. Genet.
, vol.41
, pp. 941-945
-
-
Jin, C.1
-
57
-
-
79953758929
-
The SUVR4 histone lysine methyltransferase binds ubiquitin and converts H3K9me1 to H3K9me3 on transposon chromatin in Arabidopsis
-
Veiseth S.V., et al. The SUVR4 histone lysine methyltransferase binds ubiquitin and converts H3K9me1 to H3K9me3 on transposon chromatin in Arabidopsis. PLoS. Genet 2011, 7:e1001325.
-
(2011)
PLoS. Genet
, vol.7
-
-
Veiseth, S.V.1
-
58
-
-
22544461653
-
Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1
-
Shahbazian M.D., Zhang K., Grunstein M. Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1. Mol. Cell 2005, 19:271-277.
-
(2005)
Mol. Cell
, vol.19
, pp. 271-277
-
-
Shahbazian, M.D.1
Zhang, K.2
Grunstein, M.3
-
59
-
-
33746324216
-
Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression
-
Shilatifard A. Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression. Annu. Rev. Biochem. 2006, 75:243-269.
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 243-269
-
-
Shilatifard, A.1
-
60
-
-
33947137710
-
Dynamics of replication-independent histone turnover in budding yeast
-
Dion M.F., Kaplan T., Kim M., Buratowski S., Friedman N., Rando O.J. Dynamics of replication-independent histone turnover in budding yeast. Science 2007, 315:1405-1408.
-
(2007)
Science
, vol.315
, pp. 1405-1408
-
-
Dion, M.F.1
Kaplan, T.2
Kim, M.3
Buratowski, S.4
Friedman, N.5
Rando, O.J.6
-
61
-
-
77952996319
-
Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones
-
Deal R.B., Henikoff J.G., Henikoff S. Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones. Science 2010, 328:1161-1164.
-
(2010)
Science
, vol.328
, pp. 1161-1164
-
-
Deal, R.B.1
Henikoff, J.G.2
Henikoff, S.3
-
62
-
-
79955583542
-
Mapping and analysis of chromatin state dynamics in nine human cell types
-
Ernst J., et al. Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 2011, 473:43-49.
-
(2011)
Nature
, vol.473
, pp. 43-49
-
-
Ernst, J.1
-
63
-
-
80052298366
-
Genome-wide maps of histone modifications unwind in vivo chromatin states of the hair follicle lineage
-
Lien W.-H., et al. Genome-wide maps of histone modifications unwind in vivo chromatin states of the hair follicle lineage. Cell Stem Cell 2011, 9:219-232.
-
(2011)
Cell Stem Cell
, vol.9
, pp. 219-232
-
-
Lien, W.-H.1
-
64
-
-
65549104157
-
Histone modifications at human enhancers reflect global cell-type-specific gene expression
-
Heintzman N.D., et al. Histone modifications at human enhancers reflect global cell-type-specific gene expression. Nature 2009, 459:108-112.
-
(2009)
Nature
, vol.459
, pp. 108-112
-
-
Heintzman, N.D.1
-
65
-
-
77950262538
-
Nucleosome dynamics define transcriptional enhancers
-
He H.H., et al. Nucleosome dynamics define transcriptional enhancers. Nat. Genet. 2010, 42:343-347.
-
(2010)
Nat. Genet.
, vol.42
, pp. 343-347
-
-
He, H.H.1
-
66
-
-
78650758676
-
Histone H3K27ac separates active from poised enhancers and predicts developmental state
-
Creyghton M.P., et al. Histone H3K27ac separates active from poised enhancers and predicts developmental state. Proc. Natl. Acad. Sci 2010, 107:21931-21936.
-
(2010)
Proc. Natl. Acad. Sci
, vol.107
, pp. 21931-21936
-
-
Creyghton, M.P.1
-
67
-
-
84866168941
-
Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants
-
Yelina N.E., et al. Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants. PLoS. Genet. 2012, 8:e1002844.
-
(2012)
PLoS. Genet.
, vol.8
-
-
Yelina, N.E.1
-
68
-
-
79955480674
-
Genome-wide analysis reveals novel molecular features of mouse recombination hotspots
-
Smagulova F., et al. Genome-wide analysis reveals novel molecular features of mouse recombination hotspots. Nature 2011, 472:375-378.
-
(2011)
Nature
, vol.472
, pp. 375-378
-
-
Smagulova, F.1
-
69
-
-
77954504873
-
Conserved role of intragenic DNA methylation in regulating alternative promoters
-
Maunakea A.K., et al. Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature 2010, 466:253-257.
-
(2010)
Nature
, vol.466
, pp. 253-257
-
-
Maunakea, A.K.1
-
70
-
-
33745402347
-
Nonadditive regulation of FRI and FLC loci mediates flowering-time variation in Arabidopsis allopolyploids
-
Wang J., Tian L., Lee H.S., Chen Z.J. Nonadditive regulation of FRI and FLC loci mediates flowering-time variation in Arabidopsis allopolyploids. Genetics 2006, 173:965-974.
-
(2006)
Genetics
, vol.173
, pp. 965-974
-
-
Wang, J.1
Tian, L.2
Lee, H.S.3
Chen, Z.J.4
-
71
-
-
58249105076
-
Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
-
Ni Z., et al. Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids. Nature 2009, 457:327-331.
-
(2009)
Nature
, vol.457
, pp. 327-331
-
-
Ni, Z.1
-
72
-
-
80052942443
-
Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification
-
Tan M., et al. Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell 2011, 146:1016-1028.
-
(2011)
Cell
, vol.146
, pp. 1016-1028
-
-
Tan, M.1
-
73
-
-
84865546608
-
Extreme bendability of DNA less than 100 base pairs long revealed by single-molecule cyclization
-
Vafabakhsh R., Ha T. Extreme bendability of DNA less than 100 base pairs long revealed by single-molecule cyclization. Science 2012, 337:1097-1101.
-
(2012)
Science
, vol.337
, pp. 1097-1101
-
-
Vafabakhsh, R.1
Ha, T.2
-
74
-
-
33747500567
-
A genomic code for nucleosome positioning
-
Segal E., et al. A genomic code for nucleosome positioning. Nature 2006, 442:772-778.
-
(2006)
Nature
, vol.442
, pp. 772-778
-
-
Segal, E.1
-
75
-
-
0011031885
-
Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast
-
Struhl K. Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast. Proc. Natl. Acad. Sci. U.S.A. 1985, 82:8419-8423.
-
(1985)
Proc. Natl. Acad. Sci. U.S.A.
, vol.82
, pp. 8419-8423
-
-
Struhl, K.1
-
76
-
-
77951116072
-
CpG islands influence chromatin structure via the CpG-binding protein Cfp1
-
Thomson J.P., et al. CpG islands influence chromatin structure via the CpG-binding protein Cfp1. Nature 2010, 464:1082-1086.
-
(2010)
Nature
, vol.464
, pp. 1082-1086
-
-
Thomson, J.P.1
-
77
-
-
76749170346
-
PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice
-
Baudat F., et al. PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. Science 2010, 327:836-840.
-
(2010)
Science
, vol.327
, pp. 836-840
-
-
Baudat, F.1
-
78
-
-
26844482093
-
A fine-scale map of recombination rates and hotspots across the human genome
-
Myers S., Bottolo L., Freeman C., McVean G., Donnelly P. A fine-scale map of recombination rates and hotspots across the human genome. Science 2005, 310:321-324.
-
(2005)
Science
, vol.310
, pp. 321-324
-
-
Myers, S.1
Bottolo, L.2
Freeman, C.3
McVean, G.4
Donnelly, P.5
-
79
-
-
76749151934
-
Prdm9 controls activation of mammalian recombination hotspots
-
Parvanov E.D., Petkov P.M., Paigen K. Prdm9 controls activation of mammalian recombination hotspots. Science 2010, 327:835.
-
(2010)
Science
, vol.327
, pp. 835
-
-
Parvanov, E.D.1
Petkov, P.M.2
Paigen, K.3
-
80
-
-
84875149194
-
Regulation of nucleosome dynamics by histone modifications
-
Zentner G.E., Henikoff S. Regulation of nucleosome dynamics by histone modifications. Nat. Struct. Mol. Biol. 2013, 20:259-266.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 259-266
-
-
Zentner, G.E.1
Henikoff, S.2
-
81
-
-
84886406766
-
Predicting the probability of H3K4me3 occupation at a base pair from the genome sequence context
-
Ha M., Hong S., Li W.H. Predicting the probability of H3K4me3 occupation at a base pair from the genome sequence context. Bioinformatics 2013.
-
(2013)
Bioinformatics
-
-
Ha, M.1
Hong, S.2
Li, W.H.3
-
82
-
-
77952557918
-
Missing heritability and strategies for finding the underlying causes of complex disease
-
Eichler E.E., et al. Missing heritability and strategies for finding the underlying causes of complex disease. Nat. Rev. Genet. 2010, 11:446-450.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 446-450
-
-
Eichler, E.E.1
|