-
2
-
-
0018961892
-
Avian oncovirus mutant (SE21Q1b) deficient in genomic RNA: characterization of a deletion in the provirus
-
Shank PR, Linial M. Avian oncovirus mutant (SE21Q1b) deficient in genomic RNA: characterization of a deletion in the provirus. J Virol 1980, 36:450-456.
-
(1980)
J Virol
, vol.36
, pp. 450-456
-
-
Shank, P.R.1
Linial, M.2
-
3
-
-
33745684269
-
Retroviral DNA integration: viral and cellular determinants of target-site selection
-
Lewinski MK, Yamashita M, Emerman M, Ciuffi A, Marshall H, Crawford G, Collins F, Shinn P, Leipzig J, Hannenhalli S, et al. Retroviral DNA integration: viral and cellular determinants of target-site selection. PLoS Pathog 2006, 2:e60.
-
(2006)
PLoS Pathog
, vol.2
-
-
Lewinski, M.K.1
Yamashita, M.2
Emerman, M.3
Ciuffi, A.4
Marshall, H.5
Crawford, G.6
Collins, F.7
Shinn, P.8
Leipzig, J.9
Hannenhalli, S.10
-
4
-
-
6344270072
-
Genome-wide analyses of avian sarcoma virus integration sites
-
Narezkina A, Taganov KD, Litwin S, Stoyanova R, Hayashi J, Seeger C, Skalka AM, Katz RA. Genome-wide analyses of avian sarcoma virus integration sites. J Virol 2004, 78:11656-11663.
-
(2004)
J Virol
, vol.78
, pp. 11656-11663
-
-
Narezkina, A.1
Taganov, K.D.2
Litwin, S.3
Stoyanova, R.4
Hayashi, J.5
Seeger, C.6
Skalka, A.M.7
Katz, R.A.8
-
5
-
-
33746214675
-
Integration of human immunodeficiency virus type 1 in untreated infection occurs preferentially within genes
-
Liu H, Dow EC, Arora R, Kimata JT, Bull LM, Arduino RC, Rice AP. Integration of human immunodeficiency virus type 1 in untreated infection occurs preferentially within genes. J Virol 2006, 80:7765-7768.
-
(2006)
J Virol
, vol.80
, pp. 7765-7768
-
-
Liu, H.1
Dow, E.C.2
Arora, R.3
Kimata, J.T.4
Bull, L.M.5
Arduino, R.C.6
Rice, A.P.7
-
6
-
-
0037841763
-
Transcription start regions in the human genome are favored targets for MLV integration
-
Wu X, Li Y, Crise B, Burgess SM. Transcription start regions in the human genome are favored targets for MLV integration. Science 2003, 300:1749-1751.
-
(2003)
Science
, vol.300
, pp. 1749-1751
-
-
Wu, X.1
Li, Y.2
Crise, B.3
Burgess, S.M.4
-
7
-
-
0024322804
-
Tat trans-activates the human immunodeficiency virus through a nascent RNA target
-
Berkhout B, Silverman RH, Jeang KT. Tat trans-activates the human immunodeficiency virus through a nascent RNA target. Cell 1989, 59:273-282.
-
(1989)
Cell
, vol.59
, pp. 273-282
-
-
Berkhout, B.1
Silverman, R.H.2
Jeang, K.T.3
-
8
-
-
0346095303
-
Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element
-
Fujinaga K, Irwin D, Huang Y, Taube R, Kurosu T, Peterlin BM. Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element. Mol Cell Biol 2004, 24:787-795.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 787-795
-
-
Fujinaga, K.1
Irwin, D.2
Huang, Y.3
Taube, R.4
Kurosu, T.5
Peterlin, B.M.6
-
9
-
-
0021136489
-
Transcriptional interference in avian retroviruses-implications for the promoter insertion model of leukaemogenesis
-
Cullen BR, Lomedico PT, Ju G. Transcriptional interference in avian retroviruses-implications for the promoter insertion model of leukaemogenesis. Nature 1984, 307:241-245.
-
(1984)
Nature
, vol.307
, pp. 241-245
-
-
Cullen, B.R.1
Lomedico, P.T.2
Ju, G.3
-
10
-
-
0019504253
-
Activation of a cellular onc gene by promoter insertion in ALV-induced lymphoid leukosis
-
Hayward WS, Neel BG, Astrin SM. Activation of a cellular onc gene by promoter insertion in ALV-induced lymphoid leukosis. Nature 1981, 290:475-480.
-
(1981)
Nature
, vol.290
, pp. 475-480
-
-
Hayward, W.S.1
Neel, B.G.2
Astrin, S.M.3
-
11
-
-
0023181899
-
5′ long terminal repeats of myc-associated proviruses appear structurally intact but are functionally impaired in tumors induced by avian leukosis viruses
-
Goodenow MM, Hayward WS. 5′ long terminal repeats of myc-associated proviruses appear structurally intact but are functionally impaired in tumors induced by avian leukosis viruses. J Virol 1987, 61:2489-2498.
-
(1987)
J Virol
, vol.61
, pp. 2489-2498
-
-
Goodenow, M.M.1
Hayward, W.S.2
-
12
-
-
77956940474
-
The 5′-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway
-
Mitchell SF, Walker SE, Algire MA, Park EH, Hinnebusch AG, Lorsch JR. The 5′-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway. Mol Cell 2010, 39:950-962.
-
(2010)
Mol Cell
, vol.39
, pp. 950-962
-
-
Mitchell, S.F.1
Walker, S.E.2
Algire, M.A.3
Park, E.H.4
Hinnebusch, A.G.5
Lorsch, J.R.6
-
13
-
-
0033788228
-
The ends of the affair: capping and polyadenylation
-
Shatkin AJ, Manley JL. The ends of the affair: capping and polyadenylation. Nat Struct Biol 2000, 7:838-842.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 838-842
-
-
Shatkin, A.J.1
Manley, J.L.2
-
14
-
-
77957039757
-
Trimethylguanosine capping selectively promotes expression of Rev-dependent HIV-1 RNAs
-
Yedavalli VS, Jeang KT. Trimethylguanosine capping selectively promotes expression of Rev-dependent HIV-1 RNAs. Proc Natl Acad Sci USA 2010, 107:14787-14792.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 14787-14792
-
-
Yedavalli, V.S.1
Jeang, K.T.2
-
15
-
-
0042658190
-
Nuclear mRNA export: insights from virology
-
Cullen BR. Nuclear mRNA export: insights from virology. Trends Biochem Sci 2003, 28:419-424.
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 419-424
-
-
Cullen, B.R.1
-
16
-
-
0021890204
-
6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing
-
6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing. Mol Cell Biol 1985, 5:2298-2306.
-
(1985)
Mol Cell Biol
, vol.5
, pp. 2298-2306
-
-
Kane, S.E.1
Beemon, K.2
-
17
-
-
84860779086
-
6A-seq
-
6A-seq. Nature 2012, 485:201-206.
-
(2012)
Nature
, vol.485
, pp. 201-206
-
-
Dominissini, D.1
Moshitch-Moshkovitz, S.2
Schwartz, S.3
Salmon-Divon, M.4
Ungar, L.5
Osenberg, S.6
Cesarkas, K.7
Jacob-Hirsch, J.8
Amariglio, N.9
Kupiec, M.10
-
18
-
-
0023644594
-
6-methyladenosine sites caused by GAC to GAU mutations
-
6-methyladenosine sites caused by GAC to GAU mutations. J Biol Chem 1987, 262:3422-3427.
-
(1987)
J Biol Chem
, vol.262
, pp. 3422-3427
-
-
Kane, S.E.1
Beemon, K.2
-
19
-
-
0026500529
-
Intronic sequences and 3′ splice sites control Rous sarcoma virus RNA splicing
-
McNally MT, Beemon K. Intronic sequences and 3′ splice sites control Rous sarcoma virus RNA splicing. J Virol 1992, 66:6-11.
-
(1992)
J Virol
, vol.66
, pp. 6-11
-
-
McNally, M.T.1
Beemon, K.2
-
20
-
-
0028807036
-
Two strong 5′ splice sites and competing, suboptimal 3′ splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA
-
O'Reilly MM, McNally MT, Beemon KL. Two strong 5′ splice sites and competing, suboptimal 3′ splice sites involved in alternative splicing of human immunodeficiency virus type 1 RNA. Virology 1995, 213:373-385.
-
(1995)
Virology
, vol.213
, pp. 373-385
-
-
O'Reilly, M.M.1
McNally, M.T.2
Beemon, K.L.3
-
21
-
-
0025156779
-
Control of retroviral RNA splicing through maintenance of suboptimal processing signals
-
Katz RA, Skalka AM. Control of retroviral RNA splicing through maintenance of suboptimal processing signals. Mol Cell Biol 1990, 10:696-704.
-
(1990)
Mol Cell Biol
, vol.10
, pp. 696-704
-
-
Katz, R.A.1
Skalka, A.M.2
-
22
-
-
0028870109
-
A suboptimal src 3′ splice site is necessary for efficient replication of Rous sarcoma virus
-
Zhang L, Stoltzfus CM. A suboptimal src 3′ splice site is necessary for efficient replication of Rous sarcoma virus. Virology 1995, 206:1099-1107.
-
(1995)
Virology
, vol.206
, pp. 1099-1107
-
-
Zhang, L.1
Stoltzfus, C.M.2
-
23
-
-
0026065612
-
The role of branchpoint and 3′-exon sequences in the control of balanced splicing of avian retrovirus RNA
-
Fu XD, Katz RA, Skalka AM, Maniatis T. The role of branchpoint and 3′-exon sequences in the control of balanced splicing of avian retrovirus RNA. Genes Dev 1991, 5:211-220.
-
(1991)
Genes Dev
, vol.5
, pp. 211-220
-
-
Fu, X.D.1
Katz, R.A.2
Skalka, A.M.3
Maniatis, T.4
-
24
-
-
0029017851
-
Inhibition of RNA splicing at the Rous sarcoma virus src 3′ splice site is mediated by an interaction between a negative cis element and a chicken embryo fibroblast nuclear factor
-
Amendt BA, Simpson SB, Stoltzfus CM. Inhibition of RNA splicing at the Rous sarcoma virus src 3′ splice site is mediated by an interaction between a negative cis element and a chicken embryo fibroblast nuclear factor. J Virol 1995, 69:5068-5076.
-
(1995)
J Virol
, vol.69
, pp. 5068-5076
-
-
Amendt, B.A.1
Simpson, S.B.2
Stoltzfus, C.M.3
-
25
-
-
0027501973
-
Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing
-
Gontarek RR, McNally MT, Beemon K. Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing. Genes Dev 1993, 7:1926-1936.
-
(1993)
Genes Dev
, vol.7
, pp. 1926-1936
-
-
Gontarek, R.R.1
McNally, M.T.2
Beemon, K.3
-
26
-
-
18944380865
-
Retroviral splicing suppressor sequesters a 3′ splice site in a 50S aberrant splicing complex
-
Giles KE, Beemon KL. Retroviral splicing suppressor sequesters a 3′ splice site in a 50S aberrant splicing complex. Mol Cell Biol 2005, 25:4397-4405.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 4397-4405
-
-
Giles, K.E.1
Beemon, K.L.2
-
27
-
-
0036436776
-
Rous sarcoma virus negative regulator of splicing selectively suppresses src mRNA splicing and promotes polyadenylation
-
O'Sullivan CT, Polony TS, Paca RE, Beemon KL. Rous sarcoma virus negative regulator of splicing selectively suppresses src mRNA splicing and promotes polyadenylation. Virology 2002, 302:405-412.
-
(2002)
Virology
, vol.302
, pp. 405-412
-
-
O'Sullivan, C.T.1
Polony, T.S.2
Paca, R.E.3
Beemon, K.L.4
-
28
-
-
0026664171
-
Two distant upstream regions containing cis-acting signals regulating splicing facilitate 3′-end processing of avian sarcoma virus RNA
-
Miller JT, Stoltzfus CM. Two distant upstream regions containing cis-acting signals regulating splicing facilitate 3′-end processing of avian sarcoma virus RNA. J Virol 1992, 66:4242-4251.
-
(1992)
J Virol
, vol.66
, pp. 4242-4251
-
-
Miller, J.T.1
Stoltzfus, C.M.2
-
29
-
-
0041888283
-
Silent point mutation in an avian retrovirus RNA processing element promotes c-myb-associated short-latency lymphomas
-
Polony TS, Bowers SJ, Neiman PE, Beemon KL. Silent point mutation in an avian retrovirus RNA processing element promotes c-myb-associated short-latency lymphomas. J Virol 2003, 77:9378-9387.
-
(2003)
J Virol
, vol.77
, pp. 9378-9387
-
-
Polony, T.S.1
Bowers, S.J.2
Neiman, P.E.3
Beemon, K.L.4
-
30
-
-
33748934440
-
The negative regulator of splicing element of Rous sarcoma virus promotes polyadenylation
-
Wilusz JE, Beemon KL. The negative regulator of splicing element of Rous sarcoma virus promotes polyadenylation. J Virol 2006, 80:9634-9640.
-
(2006)
J Virol
, vol.80
, pp. 9634-9640
-
-
Wilusz, J.E.1
Beemon, K.L.2
-
31
-
-
80055120941
-
Juxtaposition of two distant, serine-arginine-rich protein-binding elements is required for optimal polyadenylation in Rous sarcoma virus
-
Hudson SW, McNally MT. Juxtaposition of two distant, serine-arginine-rich protein-binding elements is required for optimal polyadenylation in Rous sarcoma virus. J Virol 2011, 85:11351-11360.
-
(2011)
J Virol
, vol.85
, pp. 11351-11360
-
-
Hudson, S.W.1
McNally, M.T.2
-
32
-
-
0027494083
-
Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity
-
Purcell DF, Martin MA. Alternative splicing of human immunodeficiency virus type 1 mRNA modulates viral protein expression, replication, and infectivity. J Virol 1993, 67:6365-6378.
-
(1993)
J Virol
, vol.67
, pp. 6365-6378
-
-
Purcell, D.F.1
Martin, M.A.2
-
33
-
-
34250313662
-
Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes
-
Schaub MC, Lopez SR, Caputi M. Members of the heterogeneous nuclear ribonucleoprotein H family activate splicing of an HIV-1 splicing substrate by promoting formation of ATP-dependent spliceosomal complexes. J Biol Chem 2007, 282:13617-13626.
-
(2007)
J Biol Chem
, vol.282
, pp. 13617-13626
-
-
Schaub, M.C.1
Lopez, S.R.2
Caputi, M.3
-
34
-
-
84864013007
-
The HIV-1 major splice donor D1 is activated by splicing enhancer elements within the leader region and the p17-inhibitory sequence
-
Asang C, Erkelenz S, Schaal H. The HIV-1 major splice donor D1 is activated by splicing enhancer elements within the leader region and the p17-inhibitory sequence. Virology 2012, 432:133-145.
-
(2012)
Virology
, vol.432
, pp. 133-145
-
-
Asang, C.1
Erkelenz, S.2
Schaal, H.3
-
35
-
-
0029025083
-
Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: evidence for inhibition mediated by cellular factors
-
Amendt BA, Si ZH, Stoltzfus CM. Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: evidence for inhibition mediated by cellular factors. Mol Cell Biol 1995, 15:4606-4615.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 4606-4615
-
-
Amendt, B.A.1
Si, Z.H.2
Stoltzfus, C.M.3
-
36
-
-
84863999140
-
Transcriptional and posttranscriptional regulation of HIV-1 gene expression
-
Karn J, Stoltzfus CM. Transcriptional and posttranscriptional regulation of HIV-1 gene expression. Cold Spring Harb Perspect Med 2012, 2:a006916.
-
(2012)
Cold Spring Harb Perspect Med
, vol.2
-
-
Karn, J.1
Stoltzfus, C.M.2
-
37
-
-
0037043699
-
Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein
-
Sheehy AM, Gaddis NC, Choi JD, Malim MH. Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein. Nature 2002, 418:646-650.
-
(2002)
Nature
, vol.418
, pp. 646-650
-
-
Sheehy, A.M.1
Gaddis, N.C.2
Choi, J.D.3
Malim, M.H.4
-
38
-
-
84869036598
-
Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing
-
Ocwieja KE, Sherrill-Mix S, Mukherjee R, Custers-Allen R, David P, Brown M, Wang S, Link DR, Olson J, Travers K, et al. Dynamic regulation of HIV-1 mRNA populations analyzed by single-molecule enrichment and long-read sequencing. Nucleic Acids Res 2010, 40:10345-10355.
-
(2010)
Nucleic Acids Res
, vol.40
, pp. 10345-10355
-
-
Ocwieja, K.E.1
Sherrill-Mix, S.2
Mukherjee, R.3
Custers-Allen, R.4
David, P.5
Brown, M.6
Wang, S.7
Link, D.R.8
Olson, J.9
Travers, K.10
-
39
-
-
0032889526
-
A hairpin structure in the R region of the human immunodeficiency virus type 1 RNA genome is instrumental in polyadenylation site selection
-
Das AT, Klaver B, Berkhout B. A hairpin structure in the R region of the human immunodeficiency virus type 1 RNA genome is instrumental in polyadenylation site selection. J Virol 1999, 73:81-91.
-
(1999)
J Virol
, vol.73
, pp. 81-91
-
-
Das, A.T.1
Klaver, B.2
Berkhout, B.3
-
40
-
-
0033952258
-
Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation
-
Ashe MP, Furger A, Proudfoot NJ. Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation. RNA 2000, 6:170-177.
-
(2000)
RNA
, vol.6
, pp. 170-177
-
-
Ashe, M.P.1
Furger, A.2
Proudfoot, N.J.3
-
41
-
-
84863610792
-
U1 snRNP determines mRNA length and regulates isoform expression
-
Berg MG, Singh LN, Younis I, Liu Q, Pinto AM, Kaida D, Zhang Z, Cho S, Sherrill-Mix S, Wan L, et al. U1 snRNP determines mRNA length and regulates isoform expression. Cell 2012, 150:53-64.
-
(2012)
Cell
, vol.150
, pp. 53-64
-
-
Berg, M.G.1
Singh, L.N.2
Younis, I.3
Liu, Q.4
Pinto, A.M.5
Kaida, D.6
Zhang, Z.7
Cho, S.8
Sherrill-Mix, S.9
Wan, L.10
-
42
-
-
2142826777
-
Nuclear export of mRNA: from the site of transcription to the cytoplasm
-
Erkmann JA, Kutay U. Nuclear export of mRNA: from the site of transcription to the cytoplasm. Exp Cell Res 2004, 296:12-20.
-
(2004)
Exp Cell Res
, vol.296
, pp. 12-20
-
-
Erkmann, J.A.1
Kutay, U.2
-
43
-
-
0024853361
-
Regulation by HIV Rev depends upon recognition of splice sites
-
Chang DD, Sharp PA. Regulation by HIV Rev depends upon recognition of splice sites. Cell 1989, 59:789-795.
-
(1989)
Cell
, vol.59
, pp. 789-795
-
-
Chang, D.D.1
Sharp, P.A.2
-
44
-
-
0033625090
-
REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export
-
Stutz F, Bachi A, Doerks T, Braun IC, Séraphin B, Wilm M, Bork P, Izaurralde E. REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export. RNA 2000, 6:638-650.
-
(2000)
RNA
, vol.6
, pp. 638-650
-
-
Stutz, F.1
Bachi, A.2
Doerks, T.3
Braun, I.C.4
Séraphin, B.5
Wilm, M.6
Bork, P.7
Izaurralde, E.8
-
45
-
-
0034699472
-
The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans
-
Zhou Z, Luo MJ, Straesser K, Katahira J, Hurt E, Reed R. The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans. Nature 2000, 407:401-405.
-
(2000)
Nature
, vol.407
, pp. 401-405
-
-
Zhou, Z.1
Luo, M.J.2
Straesser, K.3
Katahira, J.4
Hurt, E.5
Reed, R.6
-
46
-
-
0347361538
-
Tap and NXT promote translation of unspliced mRNA
-
Jin L, Guzik BW, Bor YC, Rekosh D, Hammarskjöld ML. Tap and NXT promote translation of unspliced mRNA. Genes Dev 2003, 17:3075-3086.
-
(2003)
Genes Dev
, vol.17
, pp. 3075-3086
-
-
Jin, L.1
Guzik, B.W.2
Bor, Y.C.3
Rekosh, D.4
Hammarskjöld, M.L.5
-
47
-
-
3042836378
-
A molecular link between SR protein dephosphorylation and mRNA export
-
Huang Y, Yario TA, Steitz JA. A molecular link between SR protein dephosphorylation and mRNA export. Proc Natl Acad Sci USA 2004, 101:9666-9670.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 9666-9670
-
-
Huang, Y.1
Yario, T.A.2
Steitz, J.A.3
-
48
-
-
0033517108
-
Dbp5, a DEAD-box protein required for mRNA export, is recruited to the cytoplasmic fibrils of nuclear pore complex via a conserved interaction with CAN/Nup159p
-
Schmitt C, von Kobbe C, Bachi A, Panté N, Rodrigues JP, Boscheron C, Rigaut G, Wilm M, Séraphin B, Carmo-Fonseca M, et al. Dbp5, a DEAD-box protein required for mRNA export, is recruited to the cytoplasmic fibrils of nuclear pore complex via a conserved interaction with CAN/Nup159p. EMBO J 1999, 18:4332-4347.
-
(1999)
EMBO J
, vol.18
, pp. 4332-4347
-
-
Schmitt, C.1
von Kobbe, C.2
Bachi, A.3
Panté, N.4
Rodrigues, J.P.5
Boscheron, C.6
Rigaut, G.7
Wilm, M.8
Séraphin, B.9
Carmo-Fonseca, M.10
-
49
-
-
27944474017
-
The DEAD-box protein Dbp5p is required to dissociate Mex67p from exported mRNPs at the nuclear rim
-
Lund MK, Guthrie C. The DEAD-box protein Dbp5p is required to dissociate Mex67p from exported mRNPs at the nuclear rim. Mol Cell 2005, 20:645-651.
-
(2005)
Mol Cell
, vol.20
, pp. 645-651
-
-
Lund, M.K.1
Guthrie, C.2
-
50
-
-
0030924190
-
CRM1 is an export receptor for leucine-rich nuclear export signals
-
Fornerod M, Ohno M, Yoshida M, Mattaj IW. CRM1 is an export receptor for leucine-rich nuclear export signals. Cell 1997, 90:1051-1060.
-
(1997)
Cell
, vol.90
, pp. 1051-1060
-
-
Fornerod, M.1
Ohno, M.2
Yoshida, M.3
Mattaj, I.W.4
-
51
-
-
7044253474
-
Requirement of DDX3 DEAD box RNA helicase for HIV-1 Rev-RRE export function
-
Yedavalli VS, Neuveut C, Chi YH, Kleiman L, Jeang KT. Requirement of DDX3 DEAD box RNA helicase for HIV-1 Rev-RRE export function. Cell 2004, 119:381-392.
-
(2004)
Cell
, vol.119
, pp. 381-392
-
-
Yedavalli, V.S.1
Neuveut, C.2
Chi, Y.H.3
Kleiman, L.4
Jeang, K.T.5
-
52
-
-
33745103496
-
The retrovirus RNA trafficking granule: from birth to maturity
-
Cochrane AW, McNally MT, Mouland AJ. The retrovirus RNA trafficking granule: from birth to maturity. Retrovirology 2006, 3:18.
-
(2006)
Retrovirology
, vol.3
, pp. 18
-
-
Cochrane, A.W.1
McNally, M.T.2
Mouland, A.J.3
-
53
-
-
0025852347
-
Rev is necessary for translation but not cytoplasmic accumulation of HIV-1 vif, vpr, and env/vpu 2 RNAs
-
Arrigo SJ, Chen IS. Rev is necessary for translation but not cytoplasmic accumulation of HIV-1 vif, vpr, and env/vpu 2 RNAs. Genes Dev 1991, 5:808-819.
-
(1991)
Genes Dev
, vol.5
, pp. 808-819
-
-
Arrigo, S.J.1
Chen, I.S.2
-
54
-
-
77953298449
-
Nuclear RNA export and packaging functions of HIV-1 Rev revisited
-
Blissenbach M, Grewe B, Hoffmann B, Brandt S, Uberla K. Nuclear RNA export and packaging functions of HIV-1 Rev revisited. J Virol 2010, 84:6598-6604.
-
(2010)
J Virol
, vol.84
, pp. 6598-6604
-
-
Blissenbach, M.1
Grewe, B.2
Hoffmann, B.3
Brandt, S.4
Uberla, K.5
-
55
-
-
0030960338
-
Inactivation of the human immunodeficiency virus type 1 inhibitory elements allows Rev-independent expression of Gag and Gag/protease and particle formation
-
Schneider R, Campbell M, Nasioulas G, Felber BK, Pavlakis GN. Inactivation of the human immunodeficiency virus type 1 inhibitory elements allows Rev-independent expression of Gag and Gag/protease and particle formation. J Virol 1997, 71:4892-4903.
-
(1997)
J Virol
, vol.71
, pp. 4892-4903
-
-
Schneider, R.1
Campbell, M.2
Nasioulas, G.3
Felber, B.K.4
Pavlakis, G.N.5
-
56
-
-
0043192802
-
PSF acts through the human immunodeficiency virus type 1 mRNA instability elements to regulate virus expression
-
Zolotukhin AS, Michalowski D, Bear J, Smulevitch SV, Traish AM, Peng R, Patton J, Shatsky IN, Felber BK. PSF acts through the human immunodeficiency virus type 1 mRNA instability elements to regulate virus expression. Mol Cell Biol 2003, 23:6618-6630.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 6618-6630
-
-
Zolotukhin, A.S.1
Michalowski, D.2
Bear, J.3
Smulevitch, S.V.4
Traish, A.M.5
Peng, R.6
Patton, J.7
Shatsky, I.N.8
Felber, B.K.9
-
57
-
-
84874614275
-
NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression
-
doi: 10.1128/mBio.00596-12.
-
Zhang Q, Chen C-Y, Yedavalli VS, Jeang KT. NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression. mBio 2013, 4:e00596-12. doi: 10.1128/mBio.00596-12.
-
(2013)
mBio
, vol.4
-
-
Zhang, Q.1
Chen, C.-Y.2
Yedavalli, V.S.3
Jeang, K.T.4
-
58
-
-
19444377055
-
A novel, mouse mammary tumor virus encoded protein with Rev-like properties
-
Indik S, Günzburg WH, Salmons B, Rouault F. A novel, mouse mammary tumor virus encoded protein with Rev-like properties. Virology 2005, 337:1-6.
-
(2005)
Virology
, vol.337
, pp. 1-6
-
-
Indik, S.1
Günzburg, W.H.2
Salmons, B.3
Rouault, F.4
-
59
-
-
27744601385
-
Mouse mammary tumor virus encodes a self-regulatory RNA export protein and is a complex retrovirus
-
Mertz JA, Simper MS, Lozano MM, Payne SM, Dudley JP. Mouse mammary tumor virus encodes a self-regulatory RNA export protein and is a complex retrovirus. J Virol 2005, 79:14737-14747.
-
(2005)
J Virol
, vol.79
, pp. 14737-14747
-
-
Mertz, J.A.1
Simper, M.S.2
Lozano, M.M.3
Payne, S.M.4
Dudley, J.P.5
-
60
-
-
0027955795
-
A small element from the Mason-Pfizer monkey virus genome makes human immunodeficiency virus type 1 expression and replication Rev-independent
-
Bray M, Prasad S, Dubay JW, Hunter E, Jeang KT, Rekosh D, Hammarskjold ML. A small element from the Mason-Pfizer monkey virus genome makes human immunodeficiency virus type 1 expression and replication Rev-independent. Proc Natl Acad Sci USA 1994, 91:1256-1260.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 1256-1260
-
-
Bray, M.1
Prasad, S.2
Dubay, J.W.3
Hunter, E.4
Jeang, K.T.5
Rekosh, D.6
Hammarskjold, M.L.7
-
61
-
-
0031434494
-
The constitutive transport element (CTE) of Mason-Pfizer monkey virus (MPMV) accesses a cellular mRNA export pathway
-
Pasquinelli AE, Ernst RK, Lund E, Grimm C, Zapp ML, Rekosh D, Hammarskjöld ML, Dahlberg JE. The constitutive transport element (CTE) of Mason-Pfizer monkey virus (MPMV) accesses a cellular mRNA export pathway. EMBO J 1997, 16:7500-7510.
-
(1997)
EMBO J
, vol.16
, pp. 7500-7510
-
-
Pasquinelli, A.E.1
Ernst, R.K.2
Lund, E.3
Grimm, C.4
Zapp, M.L.5
Rekosh, D.6
Hammarskjöld, M.L.7
Dahlberg, J.E.8
-
62
-
-
0029950099
-
Avian retroviral RNA element promotes unspliced RNA accumulation in the cytoplasm
-
Ogert RA, Lee LH, Beemon KL. Avian retroviral RNA element promotes unspliced RNA accumulation in the cytoplasm. J Virol 1996, 70:3834-3843.
-
(1996)
J Virol
, vol.70
, pp. 3834-3843
-
-
Ogert, R.A.1
Lee, L.H.2
Beemon, K.L.3
-
63
-
-
0032764076
-
Structural and functional analysis of the avian leukemia virus constitutive transport element
-
Yang J, Cullen BR. Structural and functional analysis of the avian leukemia virus constitutive transport element. RNA 1999, 5:1645-1655.
-
(1999)
RNA
, vol.5
, pp. 1645-1655
-
-
Yang, J.1
Cullen, B.R.2
-
64
-
-
0033818905
-
Rous sarcoma virus DR posttranscriptional elements use a novel RNA export pathway
-
Paca RE, Ogert RA, Hibbert CS, Izaurralde E, Beemon KL. Rous sarcoma virus DR posttranscriptional elements use a novel RNA export pathway. J Virol 2000, 74:9507-9514.
-
(2000)
J Virol
, vol.74
, pp. 9507-9514
-
-
Paca, R.E.1
Ogert, R.A.2
Hibbert, C.S.3
Izaurralde, E.4
Beemon, K.L.5
-
65
-
-
34248559432
-
Tap and Dbp5, but not Gag, are involved in DR-mediated nuclear export of unspliced Rous sarcoma virus RNA
-
LeBlanc JJ, Uddowla S, Abraham B, Clatterbuck S, Beemon KL. Tap and Dbp5, but not Gag, are involved in DR-mediated nuclear export of unspliced Rous sarcoma virus RNA. Virology 2007, 363:376-386.
-
(2007)
Virology
, vol.363
, pp. 376-386
-
-
LeBlanc, J.J.1
Uddowla, S.2
Abraham, B.3
Clatterbuck, S.4
Beemon, K.L.5
-
66
-
-
63049133085
-
Mechanisms employed by retroviruses to exploit host factors for translational control of a complicated proteome
-
Bolinger C, Boris-Lawrie K. Mechanisms employed by retroviruses to exploit host factors for translational control of a complicated proteome. Retrovirology 2009, 6:8.
-
(2009)
Retrovirology
, vol.6
, pp. 8
-
-
Bolinger, C.1
Boris-Lawrie, K.2
-
67
-
-
33846507162
-
Translational control of retroviruses
-
Balvay L, Lopez Lastra M, Sargueil B, Darlix JL, Ohlmann T. Translational control of retroviruses. Nat Rev Microbiol 2007, 5:28-40.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 28-40
-
-
Balvay, L.1
Lopez Lastra, M.2
Sargueil, B.3
Darlix, J.L.4
Ohlmann, T.5
-
68
-
-
0028925912
-
The first and third uORFs in RSV leader RNA are efficiently translated: implications for translational regulation and viral RNA packaging
-
Donzé O, Damay P, Spahr PF. The first and third uORFs in RSV leader RNA are efficiently translated: implications for translational regulation and viral RNA packaging. Nucleic Acids Res 1995, 23:861-868.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 861-868
-
-
Donzé, O.1
Damay, P.2
Spahr, P.F.3
-
69
-
-
0027159960
-
Alterations of the three short open reading frames in the Rous sarcoma virus leader RNA modulate viral replication and gene expression
-
Moustakas A, Sonstegard TS, Hackett PB. Alterations of the three short open reading frames in the Rous sarcoma virus leader RNA modulate viral replication and gene expression. J Virol 1993, 67:4337-4349.
-
(1993)
J Virol
, vol.67
, pp. 4337-4349
-
-
Moustakas, A.1
Sonstegard, T.S.2
Hackett, P.B.3
-
70
-
-
34247123294
-
Mutation in the glycosylated gag protein of murine leukemia virus results in reduced in vivo infectivity and a novel defect in viral budding or release
-
Low A, Datta S, Kuznetsov Y, Jahid S, Kothari N, McPherson A, Fan H. Mutation in the glycosylated gag protein of murine leukemia virus results in reduced in vivo infectivity and a novel defect in viral budding or release. J Virol 2007, 81:3685-3692.
-
(2007)
J Virol
, vol.81
, pp. 3685-3692
-
-
Low, A.1
Datta, S.2
Kuznetsov, Y.3
Jahid, S.4
Kothari, N.5
McPherson, A.6
Fan, H.7
-
71
-
-
0026512989
-
Mechanism of translation of monocistronic and multicistronic human immunodeficiency virus type 1 mRNAs
-
Schwartz S, Felber BK, Pavlakis GN. Mechanism of translation of monocistronic and multicistronic human immunodeficiency virus type 1 mRNAs. Mol Cell Biol 1992, 12:207-219.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 207-219
-
-
Schwartz, S.1
Felber, B.K.2
Pavlakis, G.N.3
-
72
-
-
84861216902
-
Thriving under stress: selective translation of HIV-1 structural protein mRNA during Vpr-mediated impairment of eIF4E translation activity
-
Sharma A, Yilmaz A, Marsh K, Cochrane A, Boris-Lawrie K. Thriving under stress: selective translation of HIV-1 structural protein mRNA during Vpr-mediated impairment of eIF4E translation activity. PLoS Pathog 2012, 8:e1002612.
-
(2012)
PLoS Pathog
, vol.8
-
-
Sharma, A.1
Yilmaz, A.2
Marsh, K.3
Cochrane, A.4
Boris-Lawrie, K.5
-
73
-
-
0026462393
-
Translational suppression in retroviral gene expression
-
Hatfield DL, Levin JG, Rein A, Oroszlan S. Translational suppression in retroviral gene expression. Adv Virus Res 1992, 41:193-239.
-
(1992)
Adv Virus Res
, vol.41
, pp. 193-239
-
-
Hatfield, D.L.1
Levin, J.G.2
Rein, A.3
Oroszlan, S.4
-
74
-
-
0036229824
-
Characterization of the protease of a fish retrovirus, walleye dermal sarcoma virus
-
Fodor SK, Vogt VM. Characterization of the protease of a fish retrovirus, walleye dermal sarcoma virus. J Virol 2002, 76:4341-4349.
-
(2002)
J Virol
, vol.76
, pp. 4341-4349
-
-
Fodor, S.K.1
Vogt, V.M.2
-
75
-
-
0029869049
-
Human foamy virus replication: a pathway distinct from that of retroviruses and hepadnaviruses
-
Yu SF, Baldwin DN, Gwynn SR, Yendapalli S, Linial ML. Human foamy virus replication: a pathway distinct from that of retroviruses and hepadnaviruses. Science 1996, 1271:1579-1582.
-
(1996)
Science
, vol.1271
, pp. 1579-1582
-
-
Yu, S.F.1
Baldwin, D.N.2
Gwynn, S.R.3
Yendapalli, S.4
Linial, M.L.5
-
76
-
-
34547623918
-
Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function
-
Isken O, Maquat LE. Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function. Genes Dev 2007, 21:1833-1856.
-
(2007)
Genes Dev
, vol.21
, pp. 1833-1856
-
-
Isken, O.1
Maquat, L.E.2
-
77
-
-
0034672093
-
The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions
-
Le Hir H, Izaurralde E, Maquat LE, Moore MJ. The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions. EMBO J 2000, 19:6860-6869.
-
(2000)
EMBO J
, vol.19
, pp. 6860-6869
-
-
Le Hir, H.1
Izaurralde, E.2
Maquat, L.E.3
Moore, M.J.4
-
78
-
-
8544253956
-
A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay
-
Amrani N, Ganesan R, Kervestin S, Mangus DA, Ghosh S, Jacobson A. A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay. Nature 2004, 432:112-118.
-
(2004)
Nature
, vol.432
, pp. 112-118
-
-
Amrani, N.1
Ganesan, R.2
Kervestin, S.3
Mangus, D.A.4
Ghosh, S.5
Jacobson, A.6
-
79
-
-
0032771414
-
SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast
-
Page MF, Carr B, Anders KR, Grimson A, Anderson P. SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast. Mol Cell Biol 1999, 19:5943-5951.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 5943-5951
-
-
Page, M.F.1
Carr, B.2
Anders, K.R.3
Grimson, A.4
Anderson, P.5
-
80
-
-
0026315967
-
Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA
-
Barker GF, Beemon K. Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA. Mol Cell Biol 1991, 11:2760-2768.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 2760-2768
-
-
Barker, G.F.1
Beemon, K.2
-
81
-
-
0028210434
-
Rous sarcoma virus RNA stability requires an open reading frame in the gag gene and sequences downstream of the gag-pol junction
-
Barker GF, Beemon K. Rous sarcoma virus RNA stability requires an open reading frame in the gag gene and sequences downstream of the gag-pol junction. Mol Cell Biol 1994, 14:1986-1996.
-
(1994)
Mol Cell Biol
, vol.14
, pp. 1986-1996
-
-
Barker, G.F.1
Beemon, K.2
-
82
-
-
2342644903
-
Unspliced Rous sarcoma virus genomic RNAs are translated and subjected to nonsense-mediated mRNA decay before packaging
-
LeBlanc JJ, Beemon KL. Unspliced Rous sarcoma virus genomic RNAs are translated and subjected to nonsense-mediated mRNA decay before packaging. J Virol 2004, 78:5139-5146.
-
(2004)
J Virol
, vol.78
, pp. 5139-5146
-
-
LeBlanc, J.J.1
Beemon, K.L.2
-
83
-
-
29844451724
-
A 3′ UTR sequence stabilizes termination codons in the unspliced RNA of Rous sarcoma virus
-
Weil JE, Beemon KL. A 3′ UTR sequence stabilizes termination codons in the unspliced RNA of Rous sarcoma virus. RNA 2006, 12:102-110.
-
(2006)
RNA
, vol.12
, pp. 102-110
-
-
Weil, J.E.1
Beemon, K.L.2
-
84
-
-
60049088883
-
Structural characterization of the Rous sarcoma virus RNA stability element
-
Weil JE, Hadjithomas M, Beemon KL. Structural characterization of the Rous sarcoma virus RNA stability element. J Virol 2009, 83:2119-2129.
-
(2009)
J Virol
, vol.83
, pp. 2119-2129
-
-
Weil, J.E.1
Hadjithomas, M.2
Beemon, K.L.3
-
85
-
-
80055011827
-
The structure and function of the Rous sarcoma virus RNA stability element
-
Withers JB, Beemon KL. The structure and function of the Rous sarcoma virus RNA stability element. J Cell Biochem 2011, 112:3085-3092.
-
(2011)
J Cell Biochem
, vol.112
, pp. 3085-3092
-
-
Withers, J.B.1
Beemon, K.L.2
-
86
-
-
43249093760
-
Posttranscriptional gene regulation by spatial rearrangement of the 3′ untranslated region
-
Eberle AB, Stalder L, Mathys H, Orozco RZ, Mühlemann O. Posttranscriptional gene regulation by spatial rearrangement of the 3′ untranslated region. PLoS Biol 2008, 6:e92.
-
(2008)
PLoS Biol
, vol.6
-
-
Eberle, A.B.1
Stalder, L.2
Mathys, H.3
Orozco, R.Z.4
Mühlemann, O.5
-
87
-
-
77958459763
-
Upf1 senses 3′ UTR length to potentiate mRNA decay
-
Hogg JR, Goff SP. Upf1 senses 3′ UTR length to potentiate mRNA decay. Cell 2010, 143:379-389.
-
(2010)
Cell
, vol.143
, pp. 379-389
-
-
Hogg, J.R.1
Goff, S.P.2
-
88
-
-
42449143475
-
Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation
-
Ajamian L, Abrahamyan L, Milev M, Ivanov PV, Kulozik AE, Gehring NH, Mouland AJ. Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation. RNA 2008, 14:914-927.
-
(2008)
RNA
, vol.14
, pp. 914-927
-
-
Ajamian, L.1
Abrahamyan, L.2
Milev, M.3
Ivanov, P.V.4
Kulozik, A.E.5
Gehring, N.H.6
Mouland, A.J.7
-
89
-
-
84863760251
-
The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1
-
Mocquet V, Neusiedler J, Rende F, Cluet D, Robin JP, Terme JM, Duc Dodon M, Wittmann J, Morris C, Le Hir H, et al. The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1. J Virol 2012, 86:7530-7543.
-
(2012)
J Virol
, vol.86
, pp. 7530-7543
-
-
Mocquet, V.1
Neusiedler, J.2
Rende, F.3
Cluet, D.4
Robin, J.P.5
Terme, J.M.6
Duc Dodon, M.7
Wittmann, J.8
Morris, C.9
Le Hir, H.10
-
90
-
-
84879167304
-
Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: implications for retroviral replication
-
pii: S1286-4579(13)00064-6. doi: 10.1016/j.micinf.2013.03.006.
-
Nakano K, Ando T, Yamagishi M, Yokoyama K, Ishida T, Ohsugi T, Tanaka Y, Brighty DW, Watanabe T. Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: implications for retroviral replication. Microbes Infect 2013. pii: S1286-4579(13)00064-6. doi: 10.1016/j.micinf.2013.03.006.
-
(2013)
Microbes Infect
-
-
Nakano, K.1
Ando, T.2
Yamagishi, M.3
Yokoyama, K.4
Ishida, T.5
Ohsugi, T.6
Tanaka, Y.7
Brighty, D.W.8
Watanabe, T.9
-
91
-
-
66349103379
-
Are viruses inhibited by APOBEC3 molecules from their host species?
-
doi: 10.1371/journal.ppat.1000347.
-
Ross SR. Are viruses inhibited by APOBEC3 molecules from their host species? Plos Pathog 2009, 5:e1000347. doi: 10.1371/journal.ppat.1000347.
-
(2009)
Plos Pathog
, vol.5
-
-
Ross, S.R.1
|