MetaSAMS-A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets

Journal of Biotechnology

Volumn 167, Issue 2, 2013, Pages 156-165

  Zakrzewski, Martha ^a   Bekel, Thomas ^b   Ander, Christina ^a   Pühler, Alfred ^a   Rupp, Oliver ^a   Stoye, Jens ^a   Schlüterd, Andreas ^a   Goesmann, Alexander ^a  

^a BIELEFELD UNIVERSITY   (Germany)

^b EVONIK DEGUSSA GMBH   (Germany)

Author keywords

Biogas; Functional annotation; Metagenomics; Taxonomic classification

Indexed keywords

BIOINFORMATICS SOFTWARE; BIOINFORMATICS TOOLS; FUNCTIONAL ANNOTATION; FUNCTIONAL INFORMATION; HIGH-THROUGHPUT SEQUENCING; METAGENOMICS; MICROBIAL COMMUNITIES; TAXONOMIC COMPOSITION;

BIOGAS; BIOINFORMATICS; ENVIRONMENTAL TECHNOLOGY; GENE ENCODING; MICROORGANISMS; PIPELINES; TOOLS;

CLASSIFICATION (OF INFORMATION);

BIOGAS; CONTIG;

AMINO ACID SEQUENCE; ANAEROBIC FERMENTATION; ARTICLE; BACTERIAL GENOME; BIOINFORMATICS; BIOMASS PRODUCTION; CLASSIFIER; CLOSTRIDIA; COMPUTER PROGRAM; FIRMICUTES; FUNCTIONAL GENOMICS; GENE FUNCTION; GENETIC CODE; HIDDEN MARKOV MODEL; HIGH THROUGHPUT SEQUENCING; METAGENOME; METAGENOMICS; METASAMS; METHANOGENESIS; METHANOMICROBIALES; MICROBIAL COMMUNITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PREDICTION; PRIORITY JOURNAL; PROTEIN FAMILY; QUALITY CONTROL; SEQUENCE ANALYSIS; STOP CODON; TAXONOMIC IDENTIFICATION;

BIOGAS; FUNCTIONAL ANNOTATION; METAGENOMICS; TAXONOMIC CLASSIFICATION;

BACTERIA; BASE SEQUENCE; BIOFUELS; COMPUTATIONAL BIOLOGY; GENETIC VARIATION; METAGENOME; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; SEQUENCE ANALYSIS; SOFTWARE;

EID: 84881663626     PISSN: 01681656     EISSN: 18734863     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2012.09.013     Document Type: Article

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