메뉴 건너뛰기




Volumn 4, Issue 3, 2013, Pages 589-600

Locus-specific proteomics by TChP: Targeted chromatin purification

Author keywords

[No Author keywords available]

Indexed keywords

HEMOGLOBIN GAMMA CHAIN; TETRACYCLINE;

EID: 84881615726     PISSN: None     EISSN: 22111247     Source Type: Journal    
DOI: 10.1016/j.celrep.2013.07.004     Document Type: Article
Times cited : (28)

References (55)
  • 1
    • 30444432407 scopus 로고    scopus 로고
    • Regulation of human fetal hemoglobin: new players, new complexities
    • Bank A. Regulation of human fetal hemoglobin: new players, new complexities. Blood 2006, 107:435-443.
    • (2006) Blood , vol.107 , pp. 435-443
    • Bank, A.1
  • 2
    • 0026649933 scopus 로고
    • A single point mutation is the cause of the Greek form of hereditary persistence of fetal haemoglobin
    • Berry M., Grosveld F., Dillon N. A single point mutation is the cause of the Greek form of hereditary persistence of fetal haemoglobin. Nature 1992, 358:499-502.
    • (1992) Nature , vol.358 , pp. 499-502
    • Berry, M.1    Grosveld, F.2    Dillon, N.3
  • 6
    • 34250815067 scopus 로고    scopus 로고
    • Sickle cell anemia: targeting the role of fetal hemoglobin in therapy
    • Coleman E., Inusa B. Sickle cell anemia: targeting the role of fetal hemoglobin in therapy. Clin. Pediatr. 2007, 46:386-391.
    • (2007) Clin. Pediatr. , vol.46 , pp. 386-391
    • Coleman, E.1    Inusa, B.2
  • 7
    • 49349112190 scopus 로고    scopus 로고
    • Interaction between antibody-diversification enzyme AID and spliceosome-associated factor CTNNBL1
    • Conticello S.G., Ganesh K., Xue K., Lu M., Rada C., Neuberger M.S. Interaction between antibody-diversification enzyme AID and spliceosome-associated factor CTNNBL1. Mol. Cell 2008, 31:474-484.
    • (2008) Mol. Cell , vol.31 , pp. 474-484
    • Conticello, S.G.1    Ganesh, K.2    Xue, K.3    Lu, M.4    Rada, C.5    Neuberger, M.S.6
  • 9
    • 58149085861 scopus 로고    scopus 로고
    • Purification of proteins associated with specific genomic Loci
    • Déjardin J., Kingston R.E. Purification of proteins associated with specific genomic Loci. Cell 2009, 136:175-186.
    • (2009) Cell , vol.136 , pp. 175-186
    • Déjardin, J.1    Kingston, R.E.2
  • 10
    • 0025891950 scopus 로고
    • Human gamma-globin genes silenced independently of other genes in the beta-globin locus
    • Dillon N., Grosveld F. Human gamma-globin genes silenced independently of other genes in the beta-globin locus. Nature 1991, 350:252-254.
    • (1991) Nature , vol.350 , pp. 252-254
    • Dillon, N.1    Grosveld, F.2
  • 11
    • 0035377208 scopus 로고    scopus 로고
    • Establishment of normal, terminally differentiating mouse erythroid progenitors: molecular characterization by cDNA arrays
    • Dolznig H., Boulmé F., Stangl K., Deiner E.M., Mikulits W., Beug H., Müllner E.W. Establishment of normal, terminally differentiating mouse erythroid progenitors: molecular characterization by cDNA arrays. FASEB J. 2001, 15:1442-1444.
    • (2001) FASEB J. , vol.15 , pp. 1442-1444
    • Dolznig, H.1    Boulmé, F.2    Stangl, K.3    Deiner, E.M.4    Mikulits, W.5    Beug, H.6    Müllner, E.W.7
  • 14
    • 80054757242 scopus 로고    scopus 로고
    • Direct identification of insulator components by insertional chromatin immunoprecipitation
    • Fujita T., Fujii H. Direct identification of insulator components by insertional chromatin immunoprecipitation. PLoS ONE 2011, 6:e26109.
    • (2011) PLoS ONE , vol.6
    • Fujita, T.1    Fujii, H.2
  • 15
    • 0026720075 scopus 로고
    • Tight control of gene expression in mammalian cells by tetracycline-responsive promoters
    • Gossen M., Bujard H. Tight control of gene expression in mammalian cells by tetracycline-responsive promoters. Proc. Natl. Acad. Sci. USA 1992, 89:5547-5551.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 5547-5551
    • Gossen, M.1    Bujard, H.2
  • 17
    • 43249098151 scopus 로고    scopus 로고
    • Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site
    • Harju-Baker S., Costa F.C., Fedosyuk H., Neades R., Peterson K.R. Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site. Mol. Cell. Biol. 2008, 28:3101-3113.
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 3101-3113
    • Harju-Baker, S.1    Costa, F.C.2    Fedosyuk, H.3    Neades, R.4    Peterson, K.R.5
  • 18
    • 0029850468 scopus 로고    scopus 로고
    • A cdc5+ homolog of a higher plant, Arabidopsis thaliana
    • Hirayama T., Shinozaki K. A cdc5+ homolog of a higher plant, Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 1996, 93:13371-13376.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 13371-13376
    • Hirayama, T.1    Shinozaki, K.2
  • 20
    • 0036529558 scopus 로고    scopus 로고
    • Requirements for utilization of CREB binding protein by hypersensitive site two of the beta-globin locus control region
    • Johnson K.D., Norton J.E., Bresnick E.H. Requirements for utilization of CREB binding protein by hypersensitive site two of the beta-globin locus control region. Nucleic Acids Res. 2002, 30:1522-1530.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1522-1530
    • Johnson, K.D.1    Norton, J.E.2    Bresnick, E.H.3
  • 22
    • 77957773762 scopus 로고    scopus 로고
    • A multiprotein complex necessary for both transcription and DNA replication at the β-globin locus
    • Karmakar S., Mahajan M.C., Schulz V., Boyapaty G., Weissman S.M. A multiprotein complex necessary for both transcription and DNA replication at the β-globin locus. EMBO J. 2010, 29:3260-3271.
    • (2010) EMBO J. , vol.29 , pp. 3260-3271
    • Karmakar, S.1    Mahajan, M.C.2    Schulz, V.3    Boyapaty, G.4    Weissman, S.M.5
  • 24
    • 33646137140 scopus 로고    scopus 로고
    • CAMP differentially regulates gamma-globin gene expression in erythroleukemic cells and primary erythroblasts through c-Myb expression
    • Kuroyanagi Y., Kaneko Y., Muta K., Park B.-S., Moi P., Ausenda S., Cappellini M.D., Ikuta T. cAMP differentially regulates gamma-globin gene expression in erythroleukemic cells and primary erythroblasts through c-Myb expression. Biochem. Biophys. Res. Commun. 2006, 344:1038-1047.
    • (2006) Biochem. Biophys. Res. Commun. , vol.344 , pp. 1038-1047
    • Kuroyanagi, Y.1    Kaneko, Y.2    Muta, K.3    Park, B.-S.4    Moi, P.5    Ausenda, S.6    Cappellini, M.D.7    Ikuta, T.8
  • 25
    • 11144224801 scopus 로고    scopus 로고
    • Different steroids co-regulate long-term expansion versus terminal differentiation in primary human erythroid progenitors
    • Leberbauer C., Boulmé F., Unfried G., Huber J., Beug H., Müllner E.W. Different steroids co-regulate long-term expansion versus terminal differentiation in primary human erythroid progenitors. Blood 2005, 105:85-94.
    • (2005) Blood , vol.105 , pp. 85-94
    • Leberbauer, C.1    Boulmé, F.2    Unfried, G.3    Huber, J.4    Beug, H.5    Müllner, E.W.6
  • 26
    • 0035863192 scopus 로고    scopus 로고
    • Analysis of the mechanism of action of non-deletion hereditary persistence of fetal hemoglobin mutants in transgenic mice
    • Li Q., Duan Z.J., Stamatoyannopoulos G. Analysis of the mechanism of action of non-deletion hereditary persistence of fetal hemoglobin mutants in transgenic mice. EMBO J. 2001, 20:157-164.
    • (2001) EMBO J. , vol.20 , pp. 157-164
    • Li, Q.1    Duan, Z.J.2    Stamatoyannopoulos, G.3
  • 27
    • 77949353724 scopus 로고    scopus 로고
    • Structural characterization of formaldehyde-induced cross-links between amino acids and deoxynucleosides and their oligomers
    • Lu K., Ye W., Zhou L., Collins L.B., Chen X., Gold A., Ball L.M., Swenberg J.A. Structural characterization of formaldehyde-induced cross-links between amino acids and deoxynucleosides and their oligomers. J.Am. Chem. Soc. 2010, 132:3388-3399.
    • (2010) J.Am. Chem. Soc. , vol.132 , pp. 3388-3399
    • Lu, K.1    Ye, W.2    Zhou, L.3    Collins, L.B.4    Chen, X.5    Gold, A.6    Ball, L.M.7    Swenberg, J.A.8
  • 28
    • 27244449015 scopus 로고    scopus 로고
    • Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region
    • Mahajan M.C., Narlikar G.J., Boyapaty G., Kingston R.E., Weissman S.M. Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region. Proc. Natl. Acad. Sci. USA 2005, 102:15012-15017.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 15012-15017
    • Mahajan, M.C.1    Narlikar, G.J.2    Boyapaty, G.3    Kingston, R.E.4    Weissman, S.M.5
  • 32
    • 33847749022 scopus 로고    scopus 로고
    • Purification and identification of proteins that bind to the hereditary persistence of fetal hemoglobin -198 mutation in the gamma-globin gene promoter
    • Olave I.A., Doneanu C., Fang X., Stamatoyannopoulos G., Li Q. Purification and identification of proteins that bind to the hereditary persistence of fetal hemoglobin -198 mutation in the gamma-globin gene promoter. J.Biol. Chem. 2007, 282:853-862.
    • (2007) J.Biol. Chem. , vol.282 , pp. 853-862
    • Olave, I.A.1    Doneanu, C.2    Fang, X.3    Stamatoyannopoulos, G.4    Li, Q.5
  • 33
    • 0034087676 scopus 로고    scopus 로고
    • Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system
    • Orth P., Schnappinger D., Hillen W., Saenger W., Hinrichs W. Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system. Nat. Struct. Biol. 2000, 7:215-219.
    • (2000) Nat. Struct. Biol. , vol.7 , pp. 215-219
    • Orth, P.1    Schnappinger, D.2    Hillen, W.3    Saenger, W.4    Hinrichs, W.5
  • 36
    • 45349107618 scopus 로고    scopus 로고
    • Fetal globin stimulant therapies in the beta-hemoglobinopathies: principles and current potential
    • Perrine S.P. Fetal globin stimulant therapies in the beta-hemoglobinopathies: principles and current potential. Pediatr. Ann. 2008, 37:339-346.
    • (2008) Pediatr. Ann. , vol.37 , pp. 339-346
    • Perrine, S.P.1
  • 42
    • 29244432479 scopus 로고    scopus 로고
    • Prospects for developing a molecular cure for thalassemia
    • Stamatoyannopoulos G. Prospects for developing a molecular cure for thalassemia. Hematology 2005, 10(Suppl 1):255-257.
    • (2005) Hematology , vol.10 , Issue.SUPPL 1 , pp. 255-257
    • Stamatoyannopoulos, G.1
  • 44
    • 0026655863 scopus 로고
    • Developmental regulation of a complete 70-kb human beta-globin locus in transgenic mice
    • Strouboulis J., Dillon N., Grosveld F. Developmental regulation of a complete 70-kb human beta-globin locus in transgenic mice. Genes Dev. 1992, 6:1857-1864.
    • (1992) Genes Dev. , vol.6 , pp. 1857-1864
    • Strouboulis, J.1    Dillon, N.2    Grosveld, F.3
  • 45
    • 0025905166 scopus 로고
    • The 5'HS2 of the globin locus control region enhances transcription through the interaction of a multimeric complex binding at two functionally distinct NF-E2 binding sites
    • Talbot D., Grosveld F. The 5'HS2 of the globin locus control region enhances transcription through the interaction of a multimeric complex binding at two functionally distinct NF-E2 binding sites. EMBO J. 1991, 10:1391-1398.
    • (1991) EMBO J. , vol.10 , pp. 1391-1398
    • Talbot, D.1    Grosveld, F.2
  • 46
    • 84880531963 scopus 로고    scopus 로고
    • R3Cseq: an R/Bioconductor package for the discovery of long-range genomic interactions from chromosome conformation capture and next-generation sequencing data
    • Published online May 13, 2013
    • Thongjuea S., Stadhouders R., Grosveld F.G., Soler E., Lenhard B. r3Cseq: an R/Bioconductor package for the discovery of long-range genomic interactions from chromosome conformation capture and next-generation sequencing data. Nucleic Acids Res. 2013, 41:e132. Published online May 13, 2013.
    • (2013) Nucleic Acids Res. , vol.41
    • Thongjuea, S.1    Stadhouders, R.2    Grosveld, F.G.3    Soler, E.4    Lenhard, B.5
  • 47
    • 0035927590 scopus 로고    scopus 로고
    • Leukemic transformation of normal murine erythroid progenitors: v- and c-ErbB act through signaling pathways activated by the EpoR and c-Kit in stress erythropoiesis
    • von Lindern M., Deiner E.M., Dolznig H., Parren-Van Amelsvoort M., Hayman M.J., Mullner E.W., Beug H. Leukemic transformation of normal murine erythroid progenitors: v- and c-ErbB act through signaling pathways activated by the EpoR and c-Kit in stress erythropoiesis. Oncogene 2001, 20:3651-3664.
    • (2001) Oncogene , vol.20 , pp. 3651-3664
    • von Lindern, M.1    Deiner, E.M.2    Dolznig, H.3    Parren-Van Amelsvoort, M.4    Hayman, M.J.5    Mullner, E.W.6    Beug, H.7
  • 48
    • 77955876447 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics in cell biology
    • Walther T.C., Mann M. Mass spectrometry-based proteomics in cell biology. J.Cell Biol. 2010, 190:491-500.
    • (2010) J.Cell Biol. , vol.190 , pp. 491-500
    • Walther, T.C.1    Mann, M.2
  • 50
    • 0030026070 scopus 로고    scopus 로고
    • Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry
    • Wilm M., Shevchenko A., Houthaeve T., Breit S., Schweigerer L., Fotsis T., Mann M. Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry. Nature 1996, 379:466-469.
    • (1996) Nature , vol.379 , pp. 466-469
    • Wilm, M.1    Shevchenko, A.2    Houthaeve, T.3    Breit, S.4    Schweigerer, L.5    Fotsis, T.6    Mann, M.7
  • 52
    • 80053365986 scopus 로고    scopus 로고
    • Role of ZBP-89 in human globin gene regulation and erythroid differentiation
    • Woo A.J., Kim J., Xu J., Huang H., Cantor A.B. Role of ZBP-89 in human globin gene regulation and erythroid differentiation. Blood 2011, 118:3684-3693.
    • (2011) Blood , vol.118 , pp. 3684-3693
    • Woo, A.J.1    Kim, J.2    Xu, J.3    Huang, H.4    Cantor, A.B.5
  • 53
    • 77950930726 scopus 로고    scopus 로고
    • Transcriptional silencing of gamma-globin by BCL11A involves long-range interactions and cooperation with SOX6
    • Xu J., Sankaran V.G., Ni M., Menne T.F., Puram R.V., Kim W., Orkin S.H. Transcriptional silencing of gamma-globin by BCL11A involves long-range interactions and cooperation with SOX6. Genes Dev. 2010, 24:783-798.
    • (2010) Genes Dev. , vol.24 , pp. 783-798
    • Xu, J.1    Sankaran, V.G.2    Ni, M.3    Menne, T.F.4    Puram, R.V.5    Kim, W.6    Orkin, S.H.7
  • 55
    • 33745468124 scopus 로고    scopus 로고
    • Autonomous silencing as well as competition controls gamma-globin gene expression during development
    • Yu M., Han H., Xiang P., Li Q., Stamatoyannopoulos G. Autonomous silencing as well as competition controls gamma-globin gene expression during development. Mol. Cell. Biol. 2006, 26:4775-4781.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 4775-4781
    • Yu, M.1    Han, H.2    Xiang, P.3    Li, Q.4    Stamatoyannopoulos, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.