-
2
-
-
1042268168
-
G-Quartets 40 Years Later: From 5′-GMP to Molecular Biology and Supramolecular Chemistry
-
DOI 10.1002/anie.200300589
-
J.T. Davis G-quartets 40 years later: from 5′-GMP to molecular biology and supramolecular chemistry Angew. Chem. Int. Ed. 43 2004 668 698 (Pubitemid 38197045)
-
(2004)
Angewandte Chemie - International Edition
, vol.43
, Issue.6
, pp. 668-698
-
-
Davis, J.T.1
-
3
-
-
0023663911
-
Telomeric DNA oligonucleotides form novel intramolecular structures containing guanine-guanine base pairs
-
E. Henderson, C.C. Hardin, S.K. Walk, I. Tinoco Jr., and E.H. Blackburn Telomeric DNA oligonucleotides form novel intramolecular structures containing guanine-guanine base pairs Cell 51 1987 899 908
-
(1987)
Cell
, vol.51
, pp. 899-908
-
-
Henderson, E.1
Hardin, C.C.2
Walk, S.K.3
Tinoco, Jr.I.4
Blackburn, E.H.5
-
4
-
-
0033034413
-
High affinity interactions of nucleolin with G-G-paired rDNA
-
L.A. Hanakahi, H. Sun, and N. Maizels High affinity interactions of nucleolin with G-G-paired rDNA J. Biol. Chem. 274 1999 15908 15912
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 15908-15912
-
-
Hanakahi, L.A.1
Sun, H.2
Maizels, N.3
-
5
-
-
73349127073
-
Genome-wide colonization of gene regulatory elements by G4 DNA motifs
-
Z. Du, Y. Zhao, and N. Li Genome-wide colonization of gene regulatory elements by G4 DNA motifs Nucleic Acids Res. 37 2009 6784 6798
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 6784-6798
-
-
Du, Z.1
Zhao, Y.2
Li, N.3
-
6
-
-
66549124907
-
The structures of quadruplex nucleic acids and their drug complexes
-
S. Neidle The structures of quadruplex nucleic acids and their drug complexes Curr. Opin. Struct. Biol. 19 2009 239 250
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, pp. 239-250
-
-
Neidle, S.1
-
7
-
-
47249089630
-
Polymorphism of human telomeric quadruplex structures
-
J. Dai, M. Carver, and D. Yang Polymorphism of human telomeric quadruplex structures Biochimie 90 2008 1172 1183
-
(2008)
Biochimie
, vol.90
, pp. 1172-1183
-
-
Dai, J.1
Carver, M.2
Yang, D.3
-
8
-
-
0038788965
-
39K NMR at 19.6 T
-
DOI 10.1021/ja0340634
-
G. Wu, A. Wong, Z. Gan, and J.T. Davis Direct detection of potassium cations bound to G-quadruplex structures by solid-state 39 K NMR at 19.6 T J. Am. Chem. Soc. 125 2003 7182 7183 (Pubitemid 36798959)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.24
, pp. 7182-7183
-
-
Wu, G.1
Wong, A.2
Gan, Z.3
Davis, J.T.4
-
9
-
-
79953313413
-
Targeting G-quadruplexes in gene promoters: A novel anticancer strategy?
-
S. Balasubramanian, L.H. Hurley, and S. Neidle Targeting G-quadruplexes in gene promoters: a novel anticancer strategy? Nat. Rev. Drug Discov. 10 2011 261 275
-
(2011)
Nat. Rev. Drug Discov.
, vol.10
, pp. 261-275
-
-
Balasubramanian, S.1
Hurley, L.H.2
Neidle, S.3
-
10
-
-
47649124369
-
G-quadruplexes: Targets in anticancer drug design
-
T.M. Ou, Y.J. Lu, J.H. Tan, Z.S. Huang, K.Y. Wong, and L.Q. Gu G-quadruplexes: targets in anticancer drug design ChemMedChem 3 2008 690 713
-
(2008)
ChemMedChem
, vol.3
, pp. 690-713
-
-
Ou, T.M.1
Lu, Y.J.2
Tan, J.H.3
Huang, Z.S.4
Wong, K.Y.5
Gu, L.Q.6
-
11
-
-
0029004009
-
PuF/NM23-H2/NDPK-B transactivates a human c-myc promoter-CAT gene via a functional nuclease hypersensitive element
-
S.J. Berberich, and E.H. Postel PuF/NM23-H2/NDPK-B transactivates a human c-myc promoter-CAT gene via a functional nuclease hypersensitive element Oncogene 10 1995 2343 2347
-
(1995)
Oncogene
, vol.10
, pp. 2343-2347
-
-
Berberich, S.J.1
Postel, E.H.2
-
12
-
-
37049004147
-
Targeting telomeres and telomerase
-
DOI 10.1016/j.biochi.2007.07.011, PII S0300908407001873, Telomeres and Telomerase: from Basic Research to Clinical Applications
-
A. De Cian, L. Lacroix, C. Douarre, N. Temime-Smaali, C. Trentesaux, J.F. Riou, and J.L. Mergny Targeting telomeres and telomerase Biochimie 90 2008 131 155 (Pubitemid 350245369)
-
(2008)
Biochimie
, vol.90
, Issue.1
, pp. 131-155
-
-
De Cian, A.1
Lacroix, L.2
Douarre, C.3
Temime-Smaali, N.4
Trentesaux, C.5
Riou, J.-F.6
Mergny, J.-L.7
-
14
-
-
54549117013
-
5-N-methylated quindoline derivatives as telomeric G-quadruplex stabilizing ligands: Effects of 5-N positive charge on quadruplex binding affinity and cell proliferation
-
Y.J. Lu, T.M. Ou, J.H. Tan, J.Q. Hou, W.Y. Shao, D. Peng, N. Sun, X.D. Wang, W.B. Wu, X.Z. Bu, Z.S. Huang, D.L. Ma, K.Y. Wong, and L.Q. Gu 5-N-methylated quindoline derivatives as telomeric G-quadruplex stabilizing ligands: effects of 5-N positive charge on quadruplex binding affinity and cell proliferation J. Med. Chem. 51 2008 6381 6392
-
(2008)
J. Med. Chem.
, vol.51
, pp. 6381-6392
-
-
Lu, Y.J.1
Ou, T.M.2
Tan, J.H.3
Hou, J.Q.4
Shao, W.Y.5
Peng, D.6
Sun, N.7
Wang, X.D.8
Wu, W.B.9
Bu, X.Z.10
Huang, Z.S.11
Ma, D.L.12
Wong, K.Y.13
Gu, L.Q.14
-
15
-
-
23044460408
-
Preferential binding of a G-quadruplex ligand to human chromosome ends
-
DOI 10.1093/nar/gki722
-
C. Granotier, G. Pennarun, L. Riou, F. Hoffschir, L.R. Gauthier, A. De Cian, D. Gomez, E. Mandine, J.F. Riou, J.L. Mergny, P. Mailliet, B. Dutrillaux, and F.D. Boussin Preferential binding of a G-quadruplex ligand to human chromosome ends Nucleic Acids Res. 33 2005 4182 4190 (Pubitemid 41487277)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.13
, pp. 4182-4190
-
-
Granotier, C.1
Pennarun, G.2
Riou, L.3
Hoffschir, F.4
Gauthier, L.R.5
De Cian, A.6
Gomez, D.7
Mandine, E.8
Riou, J.-F.9
Mergny, J.-L.10
Mailliet, P.11
Dutrillaux, B.12
Boussin, F.D.13
-
16
-
-
0037022658
-
Cell senescence and telomere shortening induced by a new series of specific G-quadruplex DNA ligands
-
DOI 10.1073/pnas.052698099
-
J.F. Riou, L. Guittat, P. Mailliet, A. Laoui, E. Renou, O. Petitgenet, F. Megnin-Chanet, C. Helene, and J.L. Mergny Cell senescence and telomere shortening induced by a new series of specific G-quadruplex DNA ligands Proc. Natl. Acad. Sci. U. S. A. 99 2002 2672 2677 (Pubitemid 34240519)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.5
, pp. 2672-2677
-
-
Riou, J.F.1
Guittat, L.2
Mailliet, P.3
Laoui, A.4
Renou, E.5
Petitgenet, O.6
Megnin-Chanet, F.7
Helene, C.8
Mergny, J.L.9
-
17
-
-
0242569297
-
A Fluorescent Carbazole Derivative: High Sensitivity for Quadruplex DNA
-
DOI 10.1021/ac034789i
-
C.C. Chang, J.Y. Wu, C.W. Chien, W.S. Wu, H. Liu, C.C. Kang, L.J. Yu, and T.C. Chang A fluorescent carbazole derivative: high sensitivity for quadruplex DNA Anal. Chem. 75 2003 6177 6183 (Pubitemid 37420611)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.22
, pp. 6177-6183
-
-
Chang, C.-C.1
Wu, J.-Y.2
Chien, C.-W.3
Wu, W.-S.4
Liu, H.5
Kang, C.-C.6
Yu, L.-J.7
Chang, T.-C.8
-
18
-
-
0242349126
-
n
-
DOI 10.1093/nar/gkg453
-
n Nucleic Acids Res. 31 2003 3963 3970 (Pubitemid 37442275)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.14
, pp. 3963-3970
-
-
Weisman-Shomer, P.1
Cohen, E.2
Hershco, I.3
Khateb, S.4
Wolfovitz-Barchad, O.5
Hurley, L.H.6
Fry, M.7
-
20
-
-
78249267899
-
Bisaryldiketene derivatives: A new class of selective ligands for c-myc G-quadruplex DNA
-
D. Peng, J.H. Tan, S.B. Chen, T.M. Ou, L.Q. Gu, and Z.S. Huang Bisaryldiketene derivatives: a new class of selective ligands for c-myc G-quadruplex DNA Bioorg. Med. Chem. 18 2010 8235 8242
-
(2010)
Bioorg. Med. Chem.
, vol.18
, pp. 8235-8242
-
-
Peng, D.1
Tan, J.H.2
Chen, S.B.3
Ou, T.M.4
Gu, L.Q.5
Huang, Z.S.6
-
21
-
-
61349135594
-
Effects of the introduction of inversion of polarity sites in the quadruplex forming oligonucleotide TGGGT
-
V. Esposito, A. Virgilio, A. Pepe, G. Oliviero, L. Mayol, and A. Galeone Effects of the introduction of inversion of polarity sites in the quadruplex forming oligonucleotide TGGGT Bioorg. Med. Chem. 17 2009 1997 2001
-
(2009)
Bioorg. Med. Chem.
, vol.17
, pp. 1997-2001
-
-
Esposito, V.1
Virgilio, A.2
Pepe, A.3
Oliviero, G.4
Mayol, L.5
Galeone, A.6
-
22
-
-
34250333423
-
Quadruplex ligands may act as molecular chaperones for tetramolecular quadruplex formation
-
A. De Cian, and J.L. Mergny Quadruplex ligands may act as molecular chaperones for tetramolecular quadruplex formation Nucleic Acids Res. 35 2007 2483 2493
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 2483-2493
-
-
De Cian, A.1
Mergny, J.L.2
-
23
-
-
2942644433
-
NMR solution structure of a parallel LNA quadruplex
-
DOI 10.1093/nar/gkh629
-
A. Randazzo, V. Esposito, O. Ohlenschlager, R. Ramachandran, and L. Mayola NMR solution structure of a parallel LNA quadruplex Nucleic Acids Res. 32 2004 3083 3092 (Pubitemid 39022999)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.10
, pp. 3083-3092
-
-
Randazzo, A.1
Esposito, V.2
Ohlenschlager, O.3
Ramachandran, R.4
Mayol, L.5
-
24
-
-
11344274827
-
-
Gaussian, Inc. Wallingford, CT
-
G.W.T.M.J. Frisch, H.B. Schlegel, G.E. Scuseria, M.A. Robb, J.R. Cheeseman, J.A. Montgomery Jr., T. Vreven, K.N. Kudin, J.C. Burant, J.M. Millam, S.S. Iyengar, J. Tomasi, V. Barone, B. Mennucci, M. Cossi, G. Scalmani, N. Rega, G.A. Petersson, H. Nakatsuji, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, M. Klene, X. Li, J.E. Knox, H.P. Hratchian, J.B. Cross, V. Bakken, C. Adamo, J. Jaramillo, R. Gomperts, R.E. Stratmann, O. Yazyev, A.J. Austin, R. Cammi, C. Pomelli, J.W. Ochterski, P.Y. Ayala, K. Morokuma, G.A. Voth, P. Salvador, J.J. Dannenberg, V.G. Zakrzewski, S. Dapprich, A.D. Daniels, M.C. Strain, O. Farkas, D.K. Malick, A.D. Rabuck, K. Raghavachari, J.B. Foresman, J.V. Ortiz, Q. Cui, A.G. Baboul, S. Clifford, J. Cioslowski, B.B. Stefanov, G. Liu, A. Liashenko, P. Piskorz, I. Komaromi, R.L. Martin, D.J. Fox, T. Keith, M.A. Al-Laham, C.Y. Peng, A. Nanayakkara, M. Challacombe, P.M.W. Gill, B. Johnson, W. Chen, M.W. Wong, C. Gonzalez, and J.A. Pople Gaussian 03 (Revision E.01) 2004 Gaussian, Inc. Wallingford, CT
-
(2004)
Gaussian 03 (Revision E.01)
-
-
Frisch, G.W.T.M.J.1
Schlegel, H.B.2
Scuseria, G.E.3
Robb, M.A.4
Cheeseman, J.R.5
Montgomery, Jr.J.A.6
Vreven, T.7
Kudin, K.N.8
Burant, J.C.9
Millam, J.M.10
Iyengar, S.S.11
Tomasi, J.12
Barone, V.13
Mennucci, B.14
Cossi, M.15
Scalmani, G.16
Rega, N.17
Petersson, G.A.18
Nakatsuji, H.19
Hada, M.20
Ehara, M.21
Toyota, K.22
Fukuda, R.23
Hasegawa, J.24
Ishida, M.25
Nakajima, T.26
Honda, Y.27
Kitao, O.28
Nakai, H.29
Klene, M.30
Li, X.31
Knox, J.E.32
Hratchian, H.P.33
Cross, J.B.34
Bakken, V.35
Adamo, C.36
Jaramillo, J.37
Gomperts, R.38
Stratmann, R.E.39
Yazyev, O.40
Austin, A.J.41
Cammi, R.42
Pomelli, C.43
Ochterski, J.W.44
Ayala, P.Y.45
Morokuma, K.46
Voth, G.A.47
Salvador, P.48
Dannenberg, J.J.49
Zakrzewski, V.G.50
Dapprich, S.51
Daniels, A.D.52
Strain, M.C.53
Farkas, O.54
Malick, D.K.55
Rabuck, A.D.56
Raghavachari, K.57
Foresman, J.B.58
Ortiz, J.V.59
Cui, Q.60
Baboul, A.G.61
Clifford, S.62
Cioslowski, J.63
Stefanov, B.B.64
Liu, G.65
Liashenko, A.66
Piskorz, P.67
Komaromi, I.68
Martin, R.L.69
Fox, D.J.70
Keith, T.71
Al-Laham, M.A.72
Peng, C.Y.73
Nanayakkara, A.74
Challacombe, M.75
Gill, P.M.W.76
Johnson, B.77
Chen, W.78
Wong, M.W.79
Gonzalez, C.80
Pople, J.A.81
more..
-
25
-
-
77449125296
-
Monitoring the temperature unfolding of G-quadruplexes by UV and circular dichroism spectroscopies and calorimetry techniques
-
C.M. Olsen, and L.A. Marky Monitoring the temperature unfolding of G-quadruplexes by UV and circular dichroism spectroscopies and calorimetry techniques Methods Mol. Biol. 608 2010 147 158
-
(2010)
Methods Mol. Biol.
, vol.608
, pp. 147-158
-
-
Olsen, C.M.1
Marky, L.A.2
-
27
-
-
34250318638
-
Refinement of the AMBER force field for nucleic acids: Improving the description of α/γ conformers
-
DOI 10.1529/biophysj.106.097782
-
A. Perez, I. Marchan, D. Svozil, J. Sponer, T.E. Cheatham III, C.A. Laughton, and M. Orozco Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers Biophys. J. 92 2007 3817 3829 (Pubitemid 46910569)
-
(2007)
Biophysical Journal
, vol.92
, Issue.11
, pp. 3817-3829
-
-
Perez, A.1
Marchan, I.2
Svozil, D.3
Sponer, J.4
Cheatham III, T.E.5
Laughton, C.A.6
Orozco, M.7
-
28
-
-
0034673130
-
Effect of loop sequence and size on DNA aptamer stability
-
DOI 10.1021/bi9919044
-
I. Smirnov, and R.H. Shafer Effect of loop sequence and size on DNA aptamer stability Biochemistry 39 2000 1462 1468 (Pubitemid 30090716)
-
(2000)
Biochemistry
, vol.39
, Issue.6
, pp. 1462-1468
-
-
Smirnov, I.1
Shafer, R.H.2
-
29
-
-
2942532422
-
Development and testing of a general AMBER force field
-
J. Wang, R.M. Wolf, J.W. Caldwell, P.A. Kollman, and D.A. Case Development and testing of a general AMBER force field J. Comput. Chem. 25 2004 1157 1174
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1157-1174
-
-
Wang, J.1
Wolf, R.M.2
Caldwell, J.W.3
Kollman, P.A.4
Case, D.A.5
-
30
-
-
33646359481
-
Predictive modelling of topology and loop variations in dimeric DNA quadruplex structures
-
DOI 10.1093/nar/gkl182
-
P. Hazel, G.N. Parkinson, and S. Neidle Predictive modelling of topology and loop variations in dimeric DNA quadruplex structures Nucleic Acids Res. 34 2006 2117 2127 (Pubitemid 44314209)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.7
, pp. 2117-2127
-
-
Hazel, P.1
Parkinson, G.N.2
Neidle, S.3
-
31
-
-
0033104039
-
New tricks for modelers from the crystallography toolkit: The particle mesh Ewald algorithm and its use in nucleic acid simulations
-
T. Darden, L. Perera, L. Li, and L. Pedersen New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations Structure 7 1999 R55 R60
-
(1999)
Structure
, vol.7
-
-
Darden, T.1
Perera, L.2
Li, L.3
Pedersen, L.4
-
32
-
-
10844247921
-
A modified TIP3P water potential for simulation with Ewald summation
-
DOI 10.1063/1.1808117
-
D.J. Price, and C.L. Brooks III A modified TIP3P water potential for simulation with Ewald summation J. Chem. Phys. 121 2004 10096 10103 (Pubitemid 40001663)
-
(2004)
Journal of Chemical Physics
, vol.121
, Issue.20
, pp. 10096-10103
-
-
Price, D.J.1
Brooks III, C.L.2
-
33
-
-
0030845842
-
Shake-and-bake: An algorithm for automatic solution ab initio of crystal structures
-
DOI 10.1016/S0076-6879(97)77003-4
-
H.A. Hauptman Shake-and-bake: an algorithm for automatic solution ab initio of crystal structures Methods Enzymol. 277 1997 3 13 (Pubitemid 27390913)
-
(1997)
Methods in Enzymology
, vol.277
, pp. 3-13
-
-
Hauptman, H.A.1
-
34
-
-
0034521981
-
Calculating structures and free energies of complex molecules: Combining molecular mechanics and continuum models
-
DOI 10.1021/ar000033j
-
P.A. Kollman, I. Massova, C. Reyes, B. Kuhn, S. Huo, L. Chong, M. Lee, T. Lee, Y. Duan, W. Wang, O. Donini, P. Cieplak, J. Srinivasan, D.A. Case, and T.E. Cheatham III Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models Acc. Chem. Res. 33 2000 889 897 (Pubitemid 32056774)
-
(2000)
Accounts of Chemical Research
, vol.33
, Issue.12
, pp. 889-897
-
-
Kollman, P.A.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.5
Chong, L.6
Lee, M.7
Lee, T.8
Duan, Y.9
Wang, W.10
Donini, O.11
-
35
-
-
56749154566
-
Diarylethynyl amides that recognize the parallel conformation of genomic promoter DNA G-quadruplexes
-
J. Dash, P.S. Shirude, S.T. Hsu, and S. Balasubramanian Diarylethynyl amides that recognize the parallel conformation of genomic promoter DNA G-quadruplexes J. Am. Chem. Soc. 130 2008 15950 15956
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 15950-15956
-
-
Dash, J.1
Shirude, P.S.2
Hsu, S.T.3
Balasubramanian, S.4
-
37
-
-
68949139305
-
Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes
-
B. Pagano, C.A. Mattia, and C. Giancola Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes Int. J. Mol. Sci. 10 2009 2935 2957
-
(2009)
Int. J. Mol. Sci.
, vol.10
, pp. 2935-2957
-
-
Pagano, B.1
Mattia, C.A.2
Giancola, C.3
-
38
-
-
33747802145
-
A thermodynamic signature for drug-DNA binding mode
-
J.B. Chaires A thermodynamic signature for drug-DNA binding mode Arch. Biochem. Biophys. 453 2006 26 31
-
(2006)
Arch. Biochem. Biophys.
, vol.453
, pp. 26-31
-
-
Chaires, J.B.1
-
39
-
-
34548400444
-
Energetics of quadruplex-drug recognition in anticancer therapy
-
DOI 10.2174/156800907781662257
-
B. Pagano, and C. Giancola Energetics of quadruplex-drug recognition in anticancer therapy Curr. Cancer Drug Targets 7 2007 520 540 (Pubitemid 47358140)
-
(2007)
Current Cancer Drug Targets
, vol.7
, Issue.6
, pp. 520-540
-
-
Pagano, B.1
Giancola, C.2
-
40
-
-
41149117564
-
Pentamidine binds to tRNA through non-specific hydrophobic interactions and inhibits aminoacylation and translation
-
DOI 10.1093/nar/gkm1180
-
T. Sun, and Y. Zhang Pentamidine binds to tRNA through non-specific hydrophobic interactions and inhibits aminoacylation and translation Nucleic Acids Res. 36 2008 1654 1664 (Pubitemid 351426116)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.5
, pp. 1654-1664
-
-
Sun, T.1
Zhang, Y.2
-
41
-
-
77952017562
-
Structural and conformational requisites in DNA quadruplex groove binding: Another piece to the puzzle
-
S. Cosconati, L. Marinelli, R. Trotta, A. Virno, S. De Tito, R. Romagnoli, B. Pagano, V. Limongelli, C. Giancola, P.G. Baraldi, L. Mayol, E. Novellino, and A. Randazzo Structural and conformational requisites in DNA quadruplex groove binding: another piece to the puzzle J. Am. Chem. Soc. 132 2010 6425 6433
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 6425-6433
-
-
Cosconati, S.1
Marinelli, L.2
Trotta, R.3
Virno, A.4
De Tito, S.5
Romagnoli, R.6
Pagano, B.7
Limongelli, V.8
Giancola, C.9
Baraldi, P.G.10
Mayol, L.11
Novellino, E.12
Randazzo, A.13
-
42
-
-
84871359419
-
Optimized end-stacking provides specificity of N-methyl mesoporphyrin IX for human telomeric G-quadruplex DNA
-
J. Nicoludis, S. Miller, P. Jeffrey, S. Barrett, P. Rablen, T. Lawton, and L. Yatsunyk Optimized end-stacking provides specificity of N-methyl mesoporphyrin IX for human telomeric G-quadruplex DNA J. Am. Chem. Soc. 134 2012 20446 20456
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 20446-20456
-
-
Nicoludis, J.1
Miller, S.2
Jeffrey, P.3
Barrett, S.4
Rablen, P.5
Lawton, T.6
Yatsunyk, L.7
-
43
-
-
84871784359
-
The crystal structure of human telomeric DNA complexed with berberine: An interesting case of stacked ligand to G-tetrad ratio higher than 1:1
-
C. Bazzicalupi, M. Ferraroni, A.R. Bilia, F. Scheggi, and P. Gratteri The crystal structure of human telomeric DNA complexed with berberine: an interesting case of stacked ligand to G-tetrad ratio higher than 1:1 Nucleic Acids Res. 41 2013 632 638
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 632-638
-
-
Bazzicalupi, C.1
Ferraroni, M.2
Bilia, A.R.3
Scheggi, F.4
Gratteri, P.5
-
44
-
-
34547744940
-
Spectroscopic studies of DNA binding modes of cation-substituted anthrapyrazoles derived from emodin
-
J.H. Tan, Y.J. Lu, Z.S. Huang, L.Q. Gu, and J.Y. Wu Spectroscopic studies of DNA binding modes of cation-substituted anthrapyrazoles derived from emodin Eur. J. Med. Chem. 42 2007 1169 1175
-
(2007)
Eur. J. Med. Chem.
, vol.42
, pp. 1169-1175
-
-
Tan, J.H.1
Lu, Y.J.2
Huang, Z.S.3
Gu, L.Q.4
Wu, J.Y.5
-
45
-
-
35448988544
-
NMR methods for studying quadruplex nucleic acids
-
M. Webba da Silva NMR methods for studying quadruplex nucleic acids Methods 43 2007 264 277
-
(2007)
Methods
, vol.43
, pp. 264-277
-
-
Webba Da Silva, M.1
-
46
-
-
58149085288
-
Rational design of substituted diarylureas: A scaffold for binding to G-quadruplex motifs
-
W.C. Drewe, R. Nanjunda, M. Gunaratnam, M. Beltran, G.N. Parkinson, A.P. Reszka, W.D. Wilson, and S. Neidle Rational design of substituted diarylureas: a scaffold for binding to G-quadruplex motifs J. Med. Chem. 51 2008 7751 7767
-
(2008)
J. Med. Chem.
, vol.51
, pp. 7751-7767
-
-
Drewe, W.C.1
Nanjunda, R.2
Gunaratnam, M.3
Beltran, M.4
Parkinson, G.N.5
Reszka, A.P.6
Wilson, W.D.7
Neidle, S.8
-
47
-
-
77952228999
-
Molecular dynamics study on the interactions of porphyrin with two antiparallel human telomeric quadruplexes
-
M.-H. Li, Q. Luo, and Z.-S. Li Molecular dynamics study on the interactions of porphyrin with two antiparallel human telomeric quadruplexes J. Phys. Chem. B 114 2010 6216 6224
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 6216-6224
-
-
Li, M.-H.1
Luo, Q.2
Li, Z.-S.3
-
48
-
-
18244362068
-
On the binding of indeno[1,2-c]isoquinolines in the DNA-topoisomerase I cleavage complex
-
DOI 10.1021/jm050017y
-
X. Xiao, S. Antony, Y. Pommier, and M. Cushman On the binding of indeno[1,2-c]isoquinolines in the DNA-topoisomerase I cleavage complex J. Med. Chem. 48 2005 3231 3238 (Pubitemid 40628043)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.9
, pp. 3231-3238
-
-
Xiao, X.1
Antony, S.2
Pommier, Y.3
Cushman, M.4
-
49
-
-
79959723259
-
Docking on the DNA G-quadruplex: A molecular electrostatic potential study
-
J.A. Mondragon-Sanchez, R. Santamaria, and R. Garduno-Juarez Docking on the DNA G-quadruplex: a molecular electrostatic potential study Biopolymers 95 2011 641 650
-
(2011)
Biopolymers
, vol.95
, pp. 641-650
-
-
Mondragon-Sanchez, J.A.1
Santamaria, R.2
Garduno-Juarez, R.3
-
50
-
-
84876353426
-
4 and cyanine dye 2,2′-diethyl-9-methyl-selenacarbocyanine bromide
-
4 and cyanine dye 2,2′-diethyl-9-methyl-selenacarbocyanine bromide Nucleic Acids Res. 41 2013 2709 2722
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 2709-2722
-
-
Gai, W.1
Yang, Q.2
Xiang, J.3
Jiang, W.4
Li, Q.5
Sun, H.6
Guan, A.7
Shang, Q.8
Zhang, H.9
Tang, Y.10
-
51
-
-
71549170849
-
Noncovalent interactions involving histidine: The effect of charge on π-π Stacking and T-shaped interactions with the DNA nucleobases
-
C.D. Churchill, and S.D. Wetmore Noncovalent interactions involving histidine: the effect of charge on π-π stacking and T-shaped interactions with the DNA nucleobases J. Phys. Chem. B 113 2009 16046 16058
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 16046-16058
-
-
Churchill, C.D.1
Wetmore, S.D.2
-
53
-
-
78649578607
-
New insights into the structures of ligand-quadruplex complexes from molecular dynamics simulations
-
J.Q. Hou, S.B. Chen, J.H. Tan, T.M. Ou, H.B. Luo, D. Li, J. Xu, L.Q. Gu, and Z.S. Huang New insights into the structures of ligand-quadruplex complexes from molecular dynamics simulations J. Phys. Chem. B 114 2010 15301 15310
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 15301-15310
-
-
Hou, J.Q.1
Chen, S.B.2
Tan, J.H.3
Ou, T.M.4
Luo, H.B.5
Li, D.6
Xu, J.7
Gu, L.Q.8
Huang, Z.S.9
-
54
-
-
84864691662
-
The prenylated dioxopiperazine alkaloid Cristatin A has selective telomeric DNA G-quadruplex stabilising properties
-
K.M. Rahman, M.D. Hossain, M.H. Sohrab, A.F. Drake, T.T. Bui, J. Husby, M. Gunaratnam, S. Neidle, C.M. Hasan, and D.E. Thurston The prenylated dioxopiperazine alkaloid Cristatin A has selective telomeric DNA G-quadruplex stabilising properties Chem. Commun. 48 2012 8760 8762
-
(2012)
Chem. Commun.
, vol.48
, pp. 8760-8762
-
-
Rahman, K.M.1
Hossain, M.D.2
Sohrab, M.H.3
Drake, A.F.4
Bui, T.T.5
Husby, J.6
Gunaratnam, M.7
Neidle, S.8
Hasan, C.M.9
Thurston, D.E.10
-
55
-
-
70350383289
-
Quinoline alkaloids as intercalative topoisomerase inhibitors
-
K.G. Byler, C. Wang, and W.N. Setzer Quinoline alkaloids as intercalative topoisomerase inhibitors J. Mol. Model. 15 2009 1417 1426
-
(2009)
J. Mol. Model.
, vol.15
, pp. 1417-1426
-
-
Byler, K.G.1
Wang, C.2
Setzer, W.N.3
|