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Volumn 55, Issue 8, 2013, Pages 735-744

Genome-wide association analysis of ten chilling tolerance indices at the germination and seedling stages in maize

Author keywords

Association mapping; Chilling tolerance; Germination and seedling stage; Maize

Indexed keywords

GENE; GENOME; GERMINATION; MAIZE; POLYMORPHISM; SEEDLING; TOLERANCE;

EID: 84881483980     PISSN: 16729072     EISSN: 17447909     Source Type: Journal    
DOI: 10.1111/jipb.12051     Document Type: Article
Times cited : (62)

References (54)
  • 1
    • 79952819519 scopus 로고    scopus 로고
    • Role of the interface between the FMN and FAD domains in the control of redox potential and electronic transfer of NADPH-cytochrome P450 reductase
    • Aigrain L, Pompon D, Truan G (2011) Role of the interface between the FMN and FAD domains in the control of redox potential and electronic transfer of NADPH-cytochrome P450 reductase. Biochem. J. 435, 197-206.
    • (2011) Biochem. J. , vol.435 , pp. 197-206
    • Aigrain, L.1    Pompon, D.2    Truan, G.3
  • 2
    • 35348954872 scopus 로고    scopus 로고
    • Chilling tolerance of Central European maize lines and their factorial crosses
    • Bhosale SU, Rymen B, Beemster GTS, Melchinger AE, Reif JC (2007) Chilling tolerance of Central European maize lines and their factorial crosses. Ann. Bot. 100, 1315-1321.
    • (2007) Ann. Bot. , vol.100 , pp. 1315-1321
    • Bhosale, S.U.1    Rymen, B.2    Beemster, G.T.S.3    Melchinger, A.E.4    Reif, J.C.5
  • 4
    • 6344245668 scopus 로고    scopus 로고
    • A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis
    • Cook D, Fowler S, Fiehn O, Thomashow MF (2004) A prominent role for the CBF cold response pathway in configuring the low-temperature metabolome of Arabidopsis. Proc. Natl. Acad. Sci. USA 101, 15243-15248.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 15243-15248
    • Cook, D.1    Fowler, S.2    Fiehn, O.3    Thomashow, M.F.4
  • 5
    • 0022891651 scopus 로고
    • Effect of soil water and temperature on corn (Zea mays L.) root growth during emergence
    • Cutforth HW, Shaykewich CF, Cho CM (1986) Effect of soil water and temperature on corn (Zea mays L.) root growth during emergence. Can. J. Soil Sci. 66, 51-58.
    • (1986) Can. J. Soil Sci. , vol.66 , pp. 51-58
    • Cutforth, H.W.1    Shaykewich, C.F.2    Cho, C.M.3
  • 7
    • 33645525448 scopus 로고    scopus 로고
    • Branch roots of young maize seedlings, their production, growth, and phloem supply from the primary root
    • Enns LC, McCully ME, Canny MJ (2006) Branch roots of young maize seedlings, their production, growth, and phloem supply from the primary root. Funct. Plant Biol. 33, 391-399.
    • (2006) Funct. Plant Biol. , vol.33 , pp. 391-399
    • Enns, L.C.1    McCully, M.E.2    Canny, M.J.3
  • 8
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study. Mol. Ecol. 14, 2611-2620.
    • (2005) Mol. Ecol. , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 9
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics 164, 1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 10
    • 0032826423 scopus 로고    scopus 로고
    • Chlorophyll fluorescence as a selection tool for cold tolerance of photosynthesis in maize (Zea mays L.)
    • Fracheboud Y, Haldimann P, Leipner J, Stamp P (1999) Chlorophyll fluorescence as a selection tool for cold tolerance of photosynthesis in maize (Zea mays L.). J. Exp. Bot. 50, 1533-1540.
    • (1999) J. Exp. Bot. , vol.50 , pp. 1533-1540
    • Fracheboud, Y.1    Haldimann, P.2    Leipner, J.3    Stamp, P.4
  • 11
    • 0036707559 scopus 로고    scopus 로고
    • Identification of quantitative trait loci for cold-tolerance of photosynthesis in maize (Zea mays L.)
    • Fracheboud Y (2002) Identification of quantitative trait loci for cold-tolerance of photosynthesis in maize (Zea mays L.). J. Exp. Bot. 53, 1967-1977.
    • (2002) J. Exp. Bot. , vol.53 , pp. 1967-1977
    • Fracheboud, Y.1
  • 13
    • 0037143756 scopus 로고    scopus 로고
    • RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance
    • Gong Z, Lee H, Xiong L, Jagendorf A, Stevenson B, Zhu JK (2002) RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance. Proc. Natl. Acad. Sci. USA 99, 11507-11512.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 11507-11512
    • Gong, Z.1    Lee, H.2    Xiong, L.3    Jagendorf, A.4    Stevenson, B.5    Zhu, J.K.6
  • 16
    • 34248637623 scopus 로고    scopus 로고
    • Root morphology and photosynthetic performance of maize inbred lines at low temperature
    • Hund A, Richner W, Soldati A, Fracheboud Y, Stamp P (2007) Root morphology and photosynthetic performance of maize inbred lines at low temperature. Eur. J. Agron. 27, 52-61.
    • (2007) Eur. J. Agron. , vol.27 , pp. 52-61
    • Hund, A.1    Richner, W.2    Soldati, A.3    Fracheboud, Y.4    Stamp, P.5
  • 18
    • 34547861256 scopus 로고    scopus 로고
    • CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
    • Jakobsson M, Rosenberg NA (2007) CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23, 1801-1806.
    • (2007) Bioinformatics , vol.23 , pp. 1801-1806
    • Jakobsson, M.1    Rosenberg, N.A.2
  • 19
    • 17144362555 scopus 로고    scopus 로고
    • Mapping of quantitative trait loci associated with chilling tolerance in maize (Zea mays L.) seedlings grown under field conditions
    • Jompuk C, Fracheboud Y, Stamp P, Leipner J (2005) Mapping of quantitative trait loci associated with chilling tolerance in maize (Zea mays L.) seedlings grown under field conditions. J. Exp. Bot. 56, 1153-1163.
    • (2005) J. Exp. Bot. , vol.56 , pp. 1153-1163
    • Jompuk, C.1    Fracheboud, Y.2    Stamp, P.3    Leipner, J.4
  • 22
    • 0026419945 scopus 로고
    • Transgenic plant aequorin reports the effects of touch and cold-shock and elicitors on cytoplasmic calcium
    • Knight MR, Campbell AK, Smith SM, Trewavas AJ (1991) Transgenic plant aequorin reports the effects of touch and cold-shock and elicitors on cytoplasmic calcium. Nature 352, 524-526.
    • (1991) Nature , vol.352 , pp. 524-526
    • Knight, M.R.1    Campbell, A.K.2    Smith, S.M.3    Trewavas, A.J.4
  • 23
    • 84865419117 scopus 로고    scopus 로고
    • Analyses of methionine sulfoxide reductase activities towards free and peptidyl methionine sulfoxides
    • Kwak GH, Hwang KY, Kim HY (2012) Analyses of methionine sulfoxide reductase activities towards free and peptidyl methionine sulfoxides. Arch. Biochem. Biophys. 527, 1-5.
    • (2012) Arch. Biochem. Biophys. , vol.527 , pp. 1-5
    • Kwak, G.H.1    Hwang, K.Y.2    Kim, H.Y.3
  • 24
    • 33645974276 scopus 로고    scopus 로고
    • The Arabidopsis cold-responsive transcriptome and its regulation by ICE1
    • Lee BH, Henderson DA, Zhu JK (2005) The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. Plant Cell 17, 3155-3175.
    • (2005) Plant Cell , vol.17 , pp. 3155-3175
    • Lee, B.H.1    Henderson, D.A.2    Zhu, J.K.3
  • 25
    • 0032857356 scopus 로고    scopus 로고
    • Effect of growing season on the photosynthetic apparatus and leaf antioxidative defenses in two maize genotypes of different chilling tolerance
    • Leipner J, Fracheboud Y, Stamp P (1999) Effect of growing season on the photosynthetic apparatus and leaf antioxidative defenses in two maize genotypes of different chilling tolerance. Environ. Exp. Bot. 42, 129-139.
    • (1999) Environ. Exp. Bot. , vol.42 , pp. 129-139
    • Leipner, J.1    Fracheboud, Y.2    Stamp, P.3
  • 26
    • 63949083064 scopus 로고    scopus 로고
    • Chilling stress in maize seedlings
    • In: Bennetzen JL, Hake SC, eds. Springer Science+Business Media, New York
    • Leipner J, Stamp P (2009) Chilling stress in maize seedlings. In: Bennetzen JL, Hake SC, eds. Handbook of Maize: Its Biology. Springer Science+Business Media, New York. pp. 291-310.
    • (2009) Handbook of Maize: Its Biology , pp. 291-310
    • Leipner, J.1    Stamp, P.2
  • 27
    • 84866147379 scopus 로고    scopus 로고
    • Genome-wide association studies identified three independent polymorphisms associated with α-tocopherol content in maize kernels
    • Li Q, Yang X, Xu S, Cai Y, Zhang D, Han Y, Li L, Zhang Z, Gao S, Li J, Yan J (2012) Genome-wide association studies identified three independent polymorphisms associated with α-tocopherol content in maize kernels. PloS ONE 7, e36807.
    • (2012) PloS ONE , vol.7
    • Li, Q.1    Yang, X.2    Xu, S.3    Cai, Y.4    Zhang, D.5    Han, Y.6    Li, L.7    Zhang, Z.8    Gao, S.9    Li, J.10    Yan, J.11
  • 28
    • 18744382780 scopus 로고    scopus 로고
    • PowerMarker: An integrated analysis environment for genetic marker analysis
    • Liu KJ, Muse SV (2005) PowerMarker: An integrated analysis environment for genetic marker analysis. Bioinformatics 21, 2128-2129.
    • (2005) Bioinformatics , vol.21 , pp. 2128-2129
    • Liu, K.J.1    Muse, S.V.2
  • 29
    • 78149499913 scopus 로고    scopus 로고
    • The CBFs: Three Arabidopsis transcription factors to cold acclimate
    • Medina J, Catalá R, Salinas J (2011) The CBFs: Three Arabidopsis transcription factors to cold acclimate. Plant Sci. 180, 3-11.
    • (2011) Plant Sci. , vol.180 , pp. 3-11
    • Medina, J.1    Catalá, R.2    Salinas, J.3
  • 30
    • 0031401113 scopus 로고    scopus 로고
    • Membrane fluidity and temperature perception
    • Murata N, Los DA (1997) Membrane fluidity and temperature perception. Plant Physiol. 115, 875-879.
    • (1997) Plant Physiol. , vol.115 , pp. 875-879
    • Murata, N.1    Los, D.A.2
  • 31
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • Nei M (1972) Genetic distance between populations. Am. Nat. 106, 283-292.
    • (1972) Am. Nat. , vol.106 , pp. 283-292
    • Nei, M.1
  • 32
    • 58249129325 scopus 로고    scopus 로고
    • Low temperature stress in maize (Zea mays L.) induces genes involved in photosynthesis and signal transduction as studied by suppression subtractive hybridization
    • Nguyen HT, Leipner J, Stamp P, Guerra-Peraza O (2009) Low temperature stress in maize (Zea mays L.) induces genes involved in photosynthesis and signal transduction as studied by suppression subtractive hybridization. Plant Physiol. Biochem. 47, 116-122.
    • (2009) Plant Physiol. Biochem. , vol.47 , pp. 116-122
    • Nguyen, H.T.1    Leipner, J.2    Stamp, P.3    Guerra-Peraza, O.4
  • 33
    • 84870386078 scopus 로고    scopus 로고
    • The discovery and characterization of riboflavin
    • Northrop-Clewes CA, Thurnham DI (2012) The discovery and characterization of riboflavin. Ann. Nutr. Metab. 61, 224-230.
    • (2012) Ann. Nutr. Metab. , vol.61 , pp. 224-230
    • Northrop-Clewes, C.A.1    Thurnham, D.I.2
  • 34
    • 0031714655 scopus 로고    scopus 로고
    • The population genetics of adaptation: The distribution of factors fixed during adaptive evolution
    • Orr HA (1998) The population genetics of adaptation: The distribution of factors fixed during adaptive evolution. Evolution 52, 935-949.
    • (1998) Evolution , vol.52 , pp. 935-949
    • Orr, H.A.1
  • 35
    • 0033801589 scopus 로고    scopus 로고
    • Early steps in cold sensing by plant cells: The role of actin cytoskeleton and membrane fluidity
    • Orvar BL, Sangwan V, Omann F, Dhindsa RS (2000) Early steps in cold sensing by plant cells: The role of actin cytoskeleton and membrane fluidity. Plant J. 23, 785-794.
    • (2000) Plant J. , vol.23 , pp. 785-794
    • Orvar, B.L.1    Sangwan, V.2    Omann, F.3    Dhindsa, R.S.4
  • 37
    • 0041569774 scopus 로고    scopus 로고
    • Apoplastic ascorbate metabolism and its role in the regulation of cell signaling
    • Pignocchi C, Foyer CH (2003) Apoplastic ascorbate metabolism and its role in the regulation of cell signaling. Curr. Opin. Plant Biol. 6, 379-389.
    • (2003) Curr. Opin. Plant Biol. , vol.6 , pp. 379-389
    • Pignocchi, C.1    Foyer, C.H.2
  • 39
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155, 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 41
    • 42449163064 scopus 로고    scopus 로고
    • 2 and ethylene is involved in cotton fiber cell elongation by modulating ROS homeostasis
    • 2 and ethylene is involved in cotton fiber cell elongation by modulating ROS homeostasis. Plant Signal. Behav. 3, 194-196.
    • (2008) Plant Signal. Behav. , vol.3 , pp. 194-196
    • Qin, Y.M.1    Hu, C.Y.2    Zhu, Y.X.3
  • 42
    • 84881520367 scopus 로고    scopus 로고
    • NTSYS-pc. Numerical taxonomy and multi-variate analysis system, Version 2.1. Exeter Software, New York.
    • Rohlf FJ (2000) NTSYS-pc. Numerical taxonomy and multi-variate analysis system, Version 2.1. Exeter Software, New York.
    • (2000)
    • Rohlf, F.J.1
  • 44
    • 79959893275 scopus 로고    scopus 로고
    • The PHD Finger: A versatile epigenome reader
    • Sanchez R, Zhou MM (2011) The PHD Finger: A versatile epigenome reader. Trends Biochem. Sci. 36, 364-372.
    • (2011) Trends Biochem. Sci. , vol.36 , pp. 364-372
    • Sanchez, R.1    Zhou, M.M.2
  • 46
    • 76749109506 scopus 로고    scopus 로고
    • Breeding technologies to increase crop production in a changing world
    • Tester M, Langridge P (2010) Breeding technologies to increase crop production in a changing world. Science 327, 818-822.
    • (2010) Science , vol.327 , pp. 818-822
    • Tester, M.1    Langridge, P.2
  • 47
    • 12844280128 scopus 로고    scopus 로고
    • Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis
    • Vogel JT, Zarka DG, Van Buskirk HA, Fowler SG, Thomashow MF (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. Plant J. 41, 195-211.
    • (2005) Plant J. , vol.41 , pp. 195-211
    • Vogel, J.T.1    Zarka, D.G.2    Van Buskirk, H.A.3    Fowler, S.G.4    Thomashow, M.F.5
  • 48
    • 84865532277 scopus 로고    scopus 로고
    • Genome-wide association study (GWAS) of resistance to head smut in maize
    • Wang M, Yan J, Zhao J, Song W, Zhang X, Xiao Y, Zheng Y (2012) Genome-wide association study (GWAS) of resistance to head smut in maize. Plant Sci. 196, 125-131.
    • (2012) Plant Sci. , vol.196 , pp. 125-131
    • Wang, M.1    Yan, J.2    Zhao, J.3    Song, W.4    Zhang, X.5    Xiao, Y.6    Zheng, Y.7
  • 49
    • 0033827989 scopus 로고    scopus 로고
    • Cold comfort farm: The acclimation of plants to freezing temperatures
    • Xin Z, Browse J (2000) Cold comfort farm: The acclimation of plants to freezing temperatures. Plant Cell Environ. 23, 893-902.
    • (2000) Plant Cell Environ. , vol.23 , pp. 893-902
    • Xin, Z.1    Browse, J.2
  • 50
    • 79952509464 scopus 로고    scopus 로고
    • Association mapping for enhancing maize (Zea mays L.) genetic improvement
    • Yan J, Warburton M, Crouch J (2011) Association mapping for enhancing maize (Zea mays L.) genetic improvement. Crop Sci. 51, 433-449.
    • (2011) Crop Sci. , vol.51 , pp. 433-449
    • Yan, J.1    Warburton, M.2    Crouch, J.3
  • 51
    • 81255144862 scopus 로고    scopus 로고
    • Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize
    • Yang X, Gao S, Xu S, Zhang Z, Prasanna BM, Li L, Li J, Yan J (2010) Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize. Mol. Breed. 28, 511-526.
    • (2010) Mol. Breed. , vol.28 , pp. 511-526
    • Yang, X.1    Gao, S.2    Xu, S.3    Zhang, Z.4    Prasanna, B.M.5    Li, L.6    Li, J.7    Yan, J.8
  • 52
    • 77955157737 scopus 로고    scopus 로고
    • NR4A orphan nuclear receptors: Transcriptional regulators of gene expression in metabolism and vascular biology
    • Zhao Y, Bruemmer D (2010) NR4A orphan nuclear receptors: Transcriptional regulators of gene expression in metabolism and vascular biology. Arterioscler. Thromb. Vasc. Biol. 30, 1535-1541.
    • (2010) Arterioscler. Thromb. Vasc. Biol. , vol.30 , pp. 1535-1541
    • Zhao, Y.1    Bruemmer, D.2
  • 53
    • 34248222619 scopus 로고    scopus 로고
    • Interplay between cold-responsive gene regulation, metabolism and RNA processing during plant cold acclimation
    • Zhu J, Dong CH, Zhu JK (2007) Interplay between cold-responsive gene regulation, metabolism and RNA processing during plant cold acclimation. Curr. Opin. Plant Biol. 10, 290-295.
    • (2007) Curr. Opin. Plant Biol. , vol.10 , pp. 290-295
    • Zhu, J.1    Dong, C.H.2    Zhu, J.K.3
  • 54
    • 85164502327 scopus 로고    scopus 로고
    • Status and prospects of association mapping in plants
    • Zhu C, Gore M, Buckler ES, Yu J (2008) Status and prospects of association mapping in plants. Plant Genom. 1, 5-20.
    • (2008) Plant Genom. , vol.1 , pp. 5-20
    • Zhu, C.1    Gore, M.2    Buckler, E.S.3    Yu, J.4


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