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Volumn 73, Issue 15, 2013, Pages 4830-4839

Transcription poisoning by topoisomerase i is controlled by gene length, splice sites, and miR-142-3p

Author keywords

[No Author keywords available]

Indexed keywords

CAMPTOTHECIN; DNA TOPOISOMERASE (ATP HYDROLYSING); MICRORNA; MICRORNA 142 3P; RNA; UBIQUITIN; UNCLASSIFIED DRUG;

EID: 84881452051     PISSN: 00085472     EISSN: 15387445     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-12-3504     Document Type: Article
Times cited : (41)

References (50)
  • 1
    • 33749034730 scopus 로고    scopus 로고
    • Topoisomerase i inhibitors: Camptothecins and beyond
    • Pommier Y. Topoisomerase I inhibitors: camptothecins and beyond. Nat Rev Cancer 2006;6:789-802.
    • (2006) Nat Rev Cancer , vol.6 , pp. 789-802
    • Pommier, Y.1
  • 2
    • 67650682519 scopus 로고    scopus 로고
    • DNA topoisomerase i inhibitors: Chemistry, biology, and interfacial inhibition
    • Pommier Y. DNA topoisomerase I inhibitors: chemistry, biology, and interfacial inhibition. Chem Rev 2009;109:2894-902.
    • (2009) Chem Rev , vol.109 , pp. 2894-2902
    • Pommier, Y.1
  • 3
    • 0022340594 scopus 로고
    • Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase i
    • Hsiang YH, Hertzberg R, Hecht S, Liu LF. Camptothecin induces protein-linked DNA breaks via mammalian DNA topoisomerase I. J Biol Chem 1985;260:14873-8.
    • (1985) J Biol Chem , vol.260 , pp. 14873-14878
    • Hsiang, Y.H.1    Hertzberg, R.2    Hecht, S.3    Liu, L.F.4
  • 4
    • 0029947168 scopus 로고    scopus 로고
    • The anti-cancer drug camptothecin inhibits elongation but stimulates initiation of RNA polymerase II transcription
    • Ljungman M, Hanawalt PC. The anti-cancer drug camptothecin inhibits elongation but stimulates initiation of RNA polymerase II transcription. Carcinogenesis 1996;17:31-5.
    • (1996) Carcinogenesis , vol.17 , pp. 31-35
    • Ljungman, M.1    Hanawalt, P.C.2
  • 5
    • 34547902426 scopus 로고    scopus 로고
    • The intra-S-phase checkpoint affects both DNA replication initiation and elongation: Single-cell and -DNA fiber analyses
    • Seiler JA, Conti C, Syed A, Aladjem MI, Pommier Y. The intra-S-phase checkpoint affects both DNA replication initiation and elongation: single-cell and -DNA fiber analyses. Mol Cell Biol 2007;27:5806-18.
    • (2007) Mol Cell Biol , vol.27 , pp. 5806-5818
    • Seiler, J.A.1    Conti, C.2    Syed, A.3    Aladjem, M.I.4    Pommier, Y.5
  • 6
    • 0024420685 scopus 로고
    • Arrest of DNA replication by drugstabilized topoisomerase I-DNA cleavable complexes as a mechanism of cell killing by camptothecin
    • Hsiang Y-H, Lihou MG, Liu LF. Arrest of DNA replication by drugstabilized topoisomerase I-DNA cleavable complexes as a mechanism of cell killing by camptothecin. Cancer Res 1989;49:5077-82.
    • (1989) Cancer Res , vol.49 , pp. 5077-5082
    • Hsiang, Y.-H.1    Lihou, M.G.2    Liu, L.F.3
  • 7
    • 0034124053 scopus 로고    scopus 로고
    • Conversion of topoisomerase i cleavage complexes on the leading strand of ribosomal DNA into 50-phosphorylated DNA double-strand breaks by replication runoff
    • Strumberg D, Pilon AA, Smith M, Hickey R, Malkas L, Pommier Y. Conversion of topoisomerase I cleavage complexes on the leading strand of ribosomal DNA into 50-phosphorylated DNA double-strand breaks by replication runoff. Mol Cell Biol 2000;20:3977-87.
    • (2000) Mol Cell Biol , vol.20 , pp. 3977-3987
    • Strumberg, D.1    Pilon, A.A.2    Smith, M.3    Hickey, R.4    Malkas, L.5    Pommier, Y.6
  • 8
    • 0030658833 scopus 로고    scopus 로고
    • Processing of topoisomerase i cleavable complexes into DNA damage by transcription
    • Wu J, Liu LF. Processing of topoisomerase I cleavable complexes into DNA damage by transcription. Nucleic Acids Res 1997;25:4181-6.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4181-4186
    • Wu, J.1    Liu, L.F.2
  • 10
    • 47249094200 scopus 로고    scopus 로고
    • The modulation of topoisomerase I-mediated DNA cleavage and the induction of DNA-topoisomerase i crosslinks by crotonaldehydederived DNA adducts
    • Dexheimer TS, Kozekova A, Rizzo CJ, Stone MP, Pommier Y. The modulation of topoisomerase I-mediated DNA cleavage and the induction of DNA-topoisomerase I crosslinks by crotonaldehydederived DNA adducts. Nucleic Acids Res 2008;36:4128-36.
    • (2008) Nucleic Acids Res , vol.36 , pp. 4128-4136
    • Dexheimer, T.S.1    Kozekova, A.2    Rizzo, C.J.3    Stone, M.P.4    Pommier, Y.5
  • 12
    • 0034923502 scopus 로고    scopus 로고
    • DNA topoisomerases: Structure, function, and mechanism
    • Champoux JJ. DNA topoisomerases: structure, function, and mechanism. Annu Rev Biochem 2001;70:369-413.
    • (2001) Annu Rev Biochem , vol.70 , pp. 369-413
    • Champoux, J.J.1
  • 13
    • 0036085460 scopus 로고    scopus 로고
    • Cellular roles of DNA topoisomerases: A molecular perspective
    • Wang JC. Cellular roles of DNA topoisomerases: a molecular perspective. Nat Rev Mol Cell Biol 2002;3:430-40.
    • (2002) Nat Rev Mol Cell Biol , vol.3 , pp. 430-440
    • Wang, J.C.1
  • 14
    • 0027138674 scopus 로고
    • Identification of human DNA topoisomerase i as a cofactor for activator-dependent transcription by RNA polymerase II
    • Kretzschmar M, Meisterernst M, Roeder RG. Identification of human DNA topoisomerase I as a cofactor for activator-dependent transcription by RNA polymerase II. Proc Natl Acad Sci U S A 1993;90: 11508-12.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 11508-11512
    • Kretzschmar, M.1    Meisterernst, M.2    Roeder, R.G.3
  • 15
    • 0031049483 scopus 로고    scopus 로고
    • Topoisomerase i enhances TFIID-TFIIA complex assembly during activation of transcription
    • Shykind BM, Kim J, Stewart L, Champoux JJ, Sharp PA. Topoisomerase I enhances TFIID-TFIIA complex assembly during activation of transcription. Genes Dev 1997;11:397-407.
    • (1997) Genes Dev , vol.11 , pp. 397-407
    • Shykind, B.M.1    Kim, J.2    Stewart, L.3    Champoux, J.J.4    Sharp, P.A.5
  • 16
    • 15844415445 scopus 로고    scopus 로고
    • Specific phosphorylation of SR proteins by mammalian DNA topoisomerase i
    • Rossi F, Labourier E, Forne T, Divita G, Derancourt J, Riou JF, et al. Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I. Nature 1996;381:80-2.
    • (1996) Nature , vol.381 , pp. 80-82
    • Rossi, F.1    Labourier, E.2    Forne, T.3    Divita, G.4    Derancourt, J.5    Riou, J.F.6
  • 19
    • 63649100364 scopus 로고    scopus 로고
    • Cdc2-like kinases and DNA topoisomerase i regulate alternative splicing of tissue factor in human endothelial cells
    • Eisenreich A, Bogdanov VY, Zakrzewicz A, Pries A, Antoniak S, Poller W, et al. Cdc2-like kinases and DNA topoisomerase I regulate alternative splicing of tissue factor in human endothelial cells. Circ Res 2009;104:589-99.
    • (2009) Circ Res , vol.104 , pp. 589-599
    • Eisenreich, A.1    Bogdanov, V.Y.2    Zakrzewicz, A.3    Pries, A.4    Antoniak, S.5    Poller, W.6
  • 20
  • 21
    • 0842304139 scopus 로고    scopus 로고
    • Topoisomerase i and II inhibitors control caspase-2 pre-messenger RNA splicing in human cells
    • Solier S, Lansiaux A, Logette E, Wu J, Soret J, Tazi J, et al. Topoisomerase I and II inhibitors control caspase-2 pre-messenger RNA splicing in human cells. Mol Cancer Res 2004;2:53-61.
    • (2004) Mol Cancer Res , vol.2 , pp. 53-61
    • Solier, S.1    Lansiaux, A.2    Logette, E.3    Wu, J.4    Soret, J.5    Tazi, J.6
  • 22
    • 0346365373 scopus 로고    scopus 로고
    • Altered serine/arginine-rich protein phosphorylation and exonic enhancer-dependent splicing in Mammalian cells lacking topoisomerase i
    • Soret J, Gabut M, Dupon C, Kohlhagen G, Stevenin J, Pommier Y, et al. Altered serine/arginine-rich protein phosphorylation and exonic enhancer-dependent splicing in Mammalian cells lacking topoisomerase I. Cancer Res 2003;63:8203-11.
    • (2003) Cancer Res , vol.63 , pp. 8203-8211
    • Soret, J.1    Gabut, M.2    Dupon, C.3    Kohlhagen, G.4    Stevenin, J.5    Pommier, Y.6
  • 23
    • 74949123158 scopus 로고    scopus 로고
    • DNA topoisomerase i inhibition by camptothecin induces escape of RNA polymerase II from promoter-proximal pause site, antisense transcription and histone acetylation at the human HIF-1alpha gene locus
    • Baranello L, Bertozzi D, Fogli MV, Pommier Y, Capranico G. DNA topoisomerase I inhibition by camptothecin induces escape of RNA polymerase II from promoter-proximal pause site, antisense transcription and histone acetylation at the human HIF-1alpha gene locus. Nucleic Acids Res 2010;38:159-71.
    • (2010) Nucleic Acids Res , vol.38 , pp. 159-171
    • Baranello, L.1    Bertozzi, D.2    Fogli, M.V.3    Pommier, Y.4    Capranico, G.5
  • 24
    • 78049239924 scopus 로고    scopus 로고
    • Genome-wide analysis of novel splice variants induced by topoisomerase i poisoning shows preferential occurrence in genes encoding splicing factors
    • Solier S, Barb J, Zeeberg BR, Varma S, Ryan MC, Kohn KW, et al. Genome-wide analysis of novel splice variants induced by topoisomerase I poisoning shows preferential occurrence in genes encoding splicing factors. Cancer Res 2010;70:8055-65.
    • (2010) Cancer Res , vol.70 , pp. 8055-8065
    • Solier, S.1    Barb, J.2    Zeeberg, B.R.3    Varma, S.4    Ryan, M.C.5    Kohn, K.W.6
  • 27
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004;3:Article3.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 28
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memoryefficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memoryefficient alignment of short DNA sequences to the human genome. Genome Biol 2009;10:R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 29
    • 0032553485 scopus 로고    scopus 로고
    • Requirement for p53 and p21 to sustain G2 arrest after DNA damage
    • Bunz F, Dutriaux A, Lengauer C, Waldman T, Zhou S, Brown JP, et al. Requirement for p53 and p21 to sustain G2 arrest after DNA damage. Science 1998;282:1497-501.
    • (1998) Science , vol.282 , pp. 1497-1501
    • Bunz, F.1    Dutriaux, A.2    Lengauer, C.3    Waldman, T.4    Zhou, S.5    Brown, J.P.6
  • 30
    • 84856226487 scopus 로고    scopus 로고
    • CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute
    • Zoppoli G, Solier S, ReinholdWC, Liu H, ConnellyJWJr,Monks A, et al. CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute. Oncogene 2012;31:403-18.
    • (2012) Oncogene , vol.31 , pp. 403-418
    • Zoppoli, G.1    Solier, S.2    Reinhold, W.C.3    Liu, H.4    Connelly Jr., J.W.5    Monks, A.6
  • 31
    • 42049105840 scopus 로고    scopus 로고
    • Dissecting microregulation of a master regulatory network
    • Sinha AU, Kaimal V, Chen J, Jegga AG. Dissecting microregulation of a master regulatory network. BMC Genomics 2008;9:88.
    • (2008) BMC Genomics , vol.9 , pp. 88
    • Sinha, A.U.1    Kaimal, V.2    Chen, J.3    Jegga, A.G.4
  • 32
    • 58249084043 scopus 로고    scopus 로고
    • Small but influential: The role of microRNAs on gene regulatory network and 30UTR evolution
    • Zhang R, Su B. Small but influential: the role of microRNAs on gene regulatory network and 30UTR evolution. J Genet Genomics 2009; 36:1-6.
    • (2009) J Genet Genomics , vol.36 , pp. 1-6
    • Zhang, R.1    Su, B.2
  • 33
    • 34547813709 scopus 로고    scopus 로고
    • MicroRNA-196 inhibits HOXB8 expression in myeloid differentiation of HL60 cells
    • Kawasaki H, Taira K. MicroRNA-196 inhibits HOXB8 expression in myeloid differentiation of HL60 cells. Nucleic Acids Symp Ser (Oxf) 2004:211-2.
    • (2004) Nucleic Acids Symp ser (Oxf) , pp. 211-212
    • Kawasaki, H.1    Taira, K.2
  • 35
    • 35548957247 scopus 로고    scopus 로고
    • MicroRNAs join the p53 network- another piece in the tumour-suppression puzzle
    • He L, He X, Lowe SW, Hannon GJ. microRNAs join the p53 network- another piece in the tumour-suppression puzzle. Nat Rev Cancer 2007; 7:819-22.
    • (2007) Nat Rev Cancer , vol.7 , pp. 819-822
    • He, L.1    He, X.2    Lowe, S.W.3    Hannon, G.J.4
  • 36
    • 34250851115 scopus 로고    scopus 로고
    • A microRNA component of the p53 tumour suppressor network
    • He L, He X, Lim LP, de Stanchina E, Xuan Z, Liang Y, et al. A microRNA component of the p53 tumour suppressor network. Nature 2007; 447:1130-4.
    • (2007) Nature , vol.447 , pp. 1130-1134
    • He, L.1    He, X.2    Lim, L.P.3    De Stanchina, E.4    Xuan, Z.5    Liang, Y.6
  • 38
    • 57749099102 scopus 로고    scopus 로고
    • P53-Responsive micrornas 192 and 215 are capable of inducing cell cycle arrest
    • Braun CJ, Zhang X, Savelyeva I, Wolff S, Moll UM, Schepeler T, et al. p53-Responsive micrornas 192 and 215 are capable of inducing cell cycle arrest. Cancer Res 2008;68:10094-104.
    • (2008) Cancer Res , vol.68 , pp. 10094-10104
    • Braun, C.J.1    Zhang, X.2    Savelyeva, I.3    Wolff, S.4    Moll, U.M.5    Schepeler, T.6
  • 39
    • 57749116172 scopus 로고    scopus 로고
    • Coordinated regulation of cell cycle transcripts by p53-Inducible microRNAs, miR-192 and miR-215
    • Georges SA, Biery MC, Kim SY, Schelter JM, Guo J, Chang AN, et al. Coordinated regulation of cell cycle transcripts by p53-Inducible microRNAs, miR-192 and miR-215. Cancer Res 2008;68: 10105-12.
    • (2008) Cancer Res , vol.68 , pp. 10105-10112
    • Georges, S.A.1    Biery, M.C.2    Kim, S.Y.3    Schelter, J.M.4    Guo, J.5    Chang, A.N.6
  • 41
    • 60849084904 scopus 로고    scopus 로고
    • Real-time PCR analysis of micro-RNA expression in ionizing radiation-treated cells
    • Chaudhry MA. Real-time PCR analysis of micro-RNA expression in ionizing radiation-treated cells. Cancer Biother Radiopharm 2009; 24:49-56.
    • (2009) Cancer Biother Radiopharm , vol.24 , pp. 49-56
    • Chaudhry, M.A.1
  • 42
    • 77956390556 scopus 로고    scopus 로고
    • Radiation-induced micro- RNA modulation in glioblastoma cells differing in DNA-repair pathways
    • Chaudhry MA, Sachdeva H, Omaruddin RA. Radiation-induced micro- RNA modulation in glioblastoma cells differing in DNA-repair pathways. DNA Cell Biol 2010;29:553-61.
    • (2010) DNA Cell Biol , vol.29 , pp. 553-561
    • Chaudhry, M.A.1    Sachdeva, H.2    Omaruddin, R.A.3
  • 43
    • 0015397811 scopus 로고
    • Effects of deoxyribonucleic acid-reactive drugs on ribonucleic acid synthesis in leukemia L1210 cells
    • Kann HE Jr, Kohn KW. Effects of deoxyribonucleic acid-reactive drugs on ribonucleic acid synthesis in leukemia L1210 cells. Mol Pharmacol 1972;8:551-60.
    • (1972) Mol Pharmacol , vol.8 , pp. 551-560
    • Kann Jr., H.E.1    Kohn, K.W.2
  • 45
    • 33644772382 scopus 로고    scopus 로고
    • Early effects of topoisomerase i inhibition on RNA polymerase II along transcribed genes in human cells
    • Khobta A, Ferri F, Lotito L, Montecucco A, Rossi R, Capranico G. Early effects of topoisomerase I inhibition on RNA polymerase II along transcribed genes in human cells. J Mol Biol 2006;357:127-38.
    • (2006) J Mol Biol , vol.357 , pp. 127-138
    • Khobta, A.1    Ferri, F.2    Lotito, L.3    Montecucco, A.4    Rossi, R.5    Capranico, G.6
  • 46
    • 47849130071 scopus 로고    scopus 로고
    • Hyperphosphorylation of RNA polymerase II in response to topoisomerase i cleavage complexes and its association with transcription- and BRCA1-dependent degradation of topoisomerase i
    • Sordet O, Larochelle S, Nicolas E, Stevens EV, Zhang C, Shokat KM, et al. Hyperphosphorylation of RNA polymerase II in response to topoisomerase I cleavage complexes and its association with transcription- and BRCA1-dependent degradation of topoisomerase I. J Mol Biol 2008;381:540-9.
    • (2008) J Mol Biol , vol.381 , pp. 540-549
    • Sordet, O.1    Larochelle, S.2    Nicolas, E.3    Stevens, E.V.4    Zhang, C.5    Shokat, K.M.6
  • 47
    • 20044382311 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay among human caspases: The caspase-2S putative protein is encoded by an extremely short-lived mRNA
    • Solier S, Logette E, Desoche L, Solary E, Corcos L. Nonsense-mediated mRNA decay among human caspases: the caspase-2S putative protein is encoded by an extremely short-lived mRNA. Cell DeathDiffer 2005;12:687-9.
    • (2005) Cell DeathDiffer , vol.12 , pp. 687-689
    • Solier, S.1    Logette, E.2    Desoche, L.3    Solary, E.4    Corcos, L.5
  • 48
    • 0037086088 scopus 로고    scopus 로고
    • Transcriptional regulation of mitotic genes by camptothecin-induced DNA damage: Microarray analysis of dose- and time-dependent effects
    • Zhou Y, Gwadry FG, Reinhold WC, Miller LD, Smith LH, Scherf U, et al. Transcriptional regulation of mitotic genes by camptothecin-induced DNA damage: microarray analysis of dose- and time-dependent effects. Cancer Res 2002;62:1688-95.
    • (2002) Cancer Res , vol.62 , pp. 1688-1695
    • Zhou, Y.1    Gwadry, F.G.2    Reinhold, W.C.3    Miller, L.D.4    Smith, L.H.5    Scherf, U.6
  • 49
    • 58249117998 scopus 로고    scopus 로고
    • A specific transcriptional response of yeast cells to camptothecin dependent on the Swi4 and Mbp1 factors
    • Lotito L, Russo A, Bueno S, Chillemi G, Fogli MV, Capranico G. A specific transcriptional response of yeast cells to camptothecin dependent on the Swi4 and Mbp1 factors. Eur J Pharmacol 2009; 603:29-36.
    • (2009) Eur J Pharmacol , vol.603 , pp. 29-36
    • Lotito, L.1    Russo, A.2    Bueno, S.3    Chillemi, G.4    Fogli, M.V.5    Capranico, G.6
  • 50
    • 0842347435 scopus 로고    scopus 로고
    • Cullin 3 promotes proteasomal degradation of the topoisomerase I-DNA covalent complex
    • Zhang HF, Tomida A, Koshimizu R, Ogiso Y, Lei S, Tsuruo T. Cullin 3 promotes proteasomal degradation of the topoisomerase I-DNA covalent complex. Cancer Res 2004;64:1114-21.
    • (2004) Cancer Res , vol.64 , pp. 1114-1121
    • Zhang, H.F.1    Tomida, A.2    Koshimizu, R.3    Ogiso, Y.4    Lei, S.5    Tsuruo, T.6


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