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Volumn 8, Issue 7, 2013, Pages

Binding of the Biogenic Polyamines to Deoxyribonucleic Acids of Varying Base Composition: Base Specificity and the Associated Energetics of the Interaction

Author keywords

[No Author keywords available]

Indexed keywords

CADAVERINE; ETHIDIUM BROMIDE; GENOMIC DNA; POLYAMINE; PUTRESCINE; SPERMIDINE; SPERMINE;

EID: 84880789654     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0070510     Document Type: Article
Times cited : (52)

References (62)
  • 1
    • 0019469747 scopus 로고
    • Role of polyamines in the control of cell proliferation and differentiation
    • Heby O, (1981) Role of polyamines in the control of cell proliferation and differentiation. Differentiation 19: 1-20.
    • (1981) Differentiation , vol.19 , pp. 1-20
    • Heby, O.1
  • 3
    • 0022406591 scopus 로고
    • Quasielastic laser light scattering and electron microscopy studies of the conformational transitions and condensation of poly(dA-dT) · poly(dA-dT)
    • Thomas TJ, Bloomfield VA, (1985) Quasielastic laser light scattering and electron microscopy studies of the conformational transitions and condensation of poly(dA-dT) · poly(dA-dT). Biopolymers 12: 2185-2194.
    • (1985) Biopolymers , vol.12 , pp. 2185-2194
    • Thomas, T.J.1    Bloomfield, V.A.2
  • 4
    • 0023881236 scopus 로고
    • Polyamine metabolism and its importance in neoplastic growth and as a target for chemotherapy
    • Pegg AE, (1988) Polyamine metabolism and its importance in neoplastic growth and as a target for chemotherapy. Cancer Res 48: 759-774.
    • (1988) Cancer Res , vol.48 , pp. 759-774
    • Pegg, A.E.1
  • 5
    • 0035099627 scopus 로고    scopus 로고
    • Polyamines in cell growth and cell death: Molecular mechanisms and therapeutic applications
    • Thomas T, Thomas TJ, (2001) Polyamines in cell growth and cell death: Molecular mechanisms and therapeutic applications. Cell Mol Life Sci 58: 244-258.
    • (2001) Cell Mol Life Sci , vol.58 , pp. 244-258
    • Thomas, T.1    Thomas, T.J.2
  • 7
    • 0030028138 scopus 로고    scopus 로고
    • Synthesis and antitumor evaluation of a highly potent cytotoxic DNA cross-linking polyamine analogue, 1,12-Diaziridinyl-4,9-diazadodecane
    • Li Y, Eiseman JL, Sentz DL, Rogers FA, Pan SS, et al. (1996) Synthesis and antitumor evaluation of a highly potent cytotoxic DNA cross-linking polyamine analogue, 1,12-Diaziridinyl-4,9-diazadodecane. J Med Chem 39: 339-341.
    • (1996) J Med Chem , vol.39 , pp. 339-341
    • Li, Y.1    Eiseman, J.L.2    Sentz, D.L.3    Rogers, F.A.4    Pan, S.S.5
  • 9
    • 0036137012 scopus 로고    scopus 로고
    • Novel synthetic polyamines are effective in the treatment of experimental microsporidiosis, an opportunistic AIDS-associated infection
    • Bacchi CJ, Weiss LM, Lane S, Frydman B, Valasinas A, et al. (2002) Novel synthetic polyamines are effective in the treatment of experimental microsporidiosis, an opportunistic AIDS-associated infection. Antimicrob Agents Chemother 46: 55-61.
    • (2002) Antimicrob Agents Chemother , vol.46 , pp. 55-61
    • Bacchi, C.J.1    Weiss, L.M.2    Lane, S.3    Frydman, B.4    Valasinas, A.5
  • 10
    • 0037713600 scopus 로고    scopus 로고
    • A novel polyamine analog (SL-11093) inhibits growth of human prostate tumor xenografts in nude mice
    • Frydman B, Porter CW, Maxuitenko Y, Sarkar A, Bhattacharya S, et al. (2003) A novel polyamine analog (SL-11093) inhibits growth of human prostate tumor xenografts in nude mice. Cancer Chemother Pharmacol 51: 488-492.
    • (2003) Cancer Chemother Pharmacol , vol.51 , pp. 488-492
    • Frydman, B.1    Porter, C.W.2    Maxuitenko, Y.3    Sarkar, A.4    Bhattacharya, S.5
  • 12
    • 0001019256 scopus 로고    scopus 로고
    • Structural specificity of polyamines and polyamine analogues in the protection of DNA from strand breaks induced by reactive oxygen species
    • Ha HC, Yager JD, Woster PA, Casero RA Jr, (1998) Structural specificity of polyamines and polyamine analogues in the protection of DNA from strand breaks induced by reactive oxygen species. Biochem Biophys Res Commun 244: 298-303.
    • (1998) Biochem Biophys Res Commun , vol.244 , pp. 298-303
    • Ha, H.C.1    Yager, J.D.2    Woster, P.A.3    Casero Jr., R.A.4
  • 13
    • 34547702823 scopus 로고    scopus 로고
    • Spermine and spermidine mediate protection against oxidative damage caused by hydrogen peroxide
    • Rider JE, Hacker A, Mackintosh CA, Pegg AE, Woster PM, et al. (2007) Spermine and spermidine mediate protection against oxidative damage caused by hydrogen peroxide. Amino Acids 2: 231-240.
    • (2007) Amino Acids , vol.2 , pp. 231-240
    • Rider, J.E.1    Hacker, A.2    Mackintosh, C.A.3    Pegg, A.E.4    Woster, P.M.5
  • 14
    • 73949105398 scopus 로고    scopus 로고
    • DNA condensation by chiral α-methylated polyamine analogues and protection of cellular DNA from oxidative damage
    • Nayvelt I, Hyvonen MT, Alhonen L, Pandya I, Thomas T, et al. (2010) DNA condensation by chiral α-methylated polyamine analogues and protection of cellular DNA from oxidative damage. Biomacromolecules 11: 97-105.
    • (2010) Biomacromolecules , vol.11 , pp. 97-105
    • Nayvelt, I.1    Hyvonen, M.T.2    Alhonen, L.3    Pandya, I.4    Thomas, T.5
  • 16
    • 0020417240 scopus 로고
    • Binding of spermidine to transfer ribonucleic acid
    • McMahon ME, Erdmann VA, (1982) Binding of spermidine to transfer ribonucleic acid. Biochemistry 21: 5280-5288.
    • (1982) Biochemistry , vol.21 , pp. 5280-5288
    • McMahon, M.E.1    Erdmann, V.A.2
  • 18
    • 0033522542 scopus 로고    scopus 로고
    • Raman study of the effects of polyamines on DNA: Spermine and histamine
    • Ruiz-Chica J, Medina MA, Sanchez-Jimenez F, Ramrez FJ, (1999) Raman study of the effects of polyamines on DNA: Spermine and histamine. J Mol Struct 480-481: 455-458.
    • (1999) J Mol Struct , vol.480-481 , pp. 455-458
    • Ruiz-Chica, J.1    Medina, M.A.2    Sanchez-Jimenez, F.3    Ramrez, F.J.4
  • 19
    • 0034452114 scopus 로고    scopus 로고
    • Circular dichroism and NMR studies of metabolically stable α-methylpolyamines: Spectral comparison with naturally occurring polyamines
    • Varnado BL, Voci CJ, Meyer LM, Coward JK, (2000) Circular dichroism and NMR studies of metabolically stable α-methylpolyamines: Spectral comparison with naturally occurring polyamines. Bioorg Chem 28: 395-408.
    • (2000) Bioorg Chem , vol.28 , pp. 395-408
    • Varnado, B.L.1    Voci, C.J.2    Meyer, L.M.3    Coward, J.K.4
  • 20
    • 0034284109 scopus 로고    scopus 로고
    • Structural basis of polyamine-DNA recognition: Spermidine and spermine interactions with genomic B-DNAs of different GC content probed by Raman spectroscopy
    • Deng H, Bloomfield VA, Benevides JM, Thomas GJ Jr, (2000) Structural basis of polyamine-DNA recognition: Spermidine and spermine interactions with genomic B-DNAs of different GC content probed by Raman spectroscopy. Nucleic Acids Res 28: 3379-3385.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3379-3385
    • Deng, H.1    Bloomfield, V.A.2    Benevides, J.M.3    Thomas Jr., G.J.4
  • 21
    • 0035972623 scopus 로고    scopus 로고
    • Characterization of polyamine-induced aggregates of oligodeoxyribonucleotides by Raman spectroscopy
    • Ruiz-Chica AJ, Medina MA, Sanchez-Jimenez F, Ramrez FJ, (2001) Characterization of polyamine-induced aggregates of oligodeoxyribonucleotides by Raman spectroscopy. J Mol Struct 565-566: 141-146.
    • (2001) J Mol Struct , vol.565-566 , pp. 141-146
    • Ruiz-Chica, A.J.1    Medina, M.A.2    Sanchez-Jimenez, F.3    Ramrez, F.J.4
  • 22
    • 0038692034 scopus 로고    scopus 로고
    • Raman spectroscopy study of the interaction between biogenic polyamines and an alternating AT oligodeoxyribonucleotide
    • Ruiz-Chica J, Medina MA, Sanchez-Jimenez F, Ramrez FJ, (2003) Raman spectroscopy study of the interaction between biogenic polyamines and an alternating AT oligodeoxyribonucleotide. Biochim Biophys Acta 1628: 11-21.
    • (2003) Biochim Biophys Acta , vol.1628 , pp. 11-21
    • Ruiz-Chica, J.1    Medina, M.A.2    Sanchez-Jimenez, F.3    Ramrez, F.J.4
  • 23
    • 4744371427 scopus 로고    scopus 로고
    • Structural analysis of DNA interactions with biogenic polyamines and cobalt(III)hexamine studied by fourier transform infrared and capillary electrophoresis
    • Ouameur AA, Tajmir-Riahi HA, (2004) Structural analysis of DNA interactions with biogenic polyamines and cobalt(III)hexamine studied by fourier transform infrared and capillary electrophoresis. J Biol Chem 279: 42041-42054.
    • (2004) J Biol Chem , vol.279 , pp. 42041-42054
    • Ouameur, A.A.1    Tajmir-Riahi, H.A.2
  • 24
    • 19144368005 scopus 로고    scopus 로고
    • Localization of spermine binding sites in 23S rRNA by photoaffinity labeling: Parsing the spermine contribution to ribosomal 50S subunit functions
    • Xaplanteri MA, Petropoulos AD, Dinos GP, Kalpaxis DL, (2005) Localization of spermine binding sites in 23S rRNA by photoaffinity labeling: Parsing the spermine contribution to ribosomal 50S subunit functions. Nucleic Acids Res 33: 2792-2805.
    • (2005) Nucleic Acids Res , vol.33 , pp. 2792-2805
    • Xaplanteri, M.A.1    Petropoulos, A.D.2    Dinos, G.P.3    Kalpaxis, D.L.4
  • 26
    • 37449006114 scopus 로고    scopus 로고
    • Polyamines stabilize left-handed Z-DNA: Using X-ray crystallographic analysis, we have found a new type of polyamine (PA) that stabilizes left-handed Z-DNA
    • Ohishi H, Odoko M, Grzeskowiak K, Hiyama Y, Tsukamoto K, et al. (2008) Polyamines stabilize left-handed Z-DNA: Using X-ray crystallographic analysis, we have found a new type of polyamine (PA) that stabilizes left-handed Z-DNA. Biochem Biophy Res Commun 366: 275-280.
    • (2008) Biochem Biophy Res Commun , vol.366 , pp. 275-280
    • Ohishi, H.1    Odoko, M.2    Grzeskowiak, K.3    Hiyama, Y.4    Tsukamoto, K.5
  • 28
    • 77957303874 scopus 로고    scopus 로고
    • Probing tRNA interaction with biogenic polyamines
    • Ouameur AA, Bourassa P, Tajmir-Riahi HA, (2010) Probing tRNA interaction with biogenic polyamines. RNA 16: 1968-1979.
    • (2010) RNA , vol.16 , pp. 1968-1979
    • Ouameur, A.A.1    Bourassa, P.2    Tajmir-Riahi, H.A.3
  • 29
    • 0023742975 scopus 로고
    • Different binding modes of spermine to A-T and G-C base pairs modulate the bending and stiffening of the DNA double helix
    • Marquet R, Colson P, Houssier C, (1988) Different binding modes of spermine to A-T and G-C base pairs modulate the bending and stiffening of the DNA double helix. J Biomol Struct Dyn 6: 205-218.
    • (1988) J Biomol Struct Dyn , vol.6 , pp. 205-218
    • Marquet, R.1    Colson, P.2    Houssier, C.3
  • 30
    • 0024546799 scopus 로고
    • Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC)
    • Jain S, Zon G, Sundaralingam M, (1989) Base only binding of spermine in the deep groove of the A-DNA octamer d(GTGTACAC). Biochemistry 28: 2360-2364.
    • (1989) Biochemistry , vol.28 , pp. 2360-2364
    • Jain, S.1    Zon, G.2    Sundaralingam, M.3
  • 31
    • 84880788561 scopus 로고    scopus 로고
    • Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: Effects of spermine binding and methylation on the bending and condensation of A-DNA
    • Tippin DB, Sundaralingam M, (1997) Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: Effects of spermine binding and methylation on the bending and condensation of A-DNA. J Mol Biol 26: 71171-1185.
    • (1997) J Mol Biol , vol.26 , pp. 71171-71185
    • Tippin, D.B.1    Sundaralingam, M.2
  • 32
    • 0043203406 scopus 로고    scopus 로고
    • Crystal structures of A-DNA duplexes
    • Wahl MC, Sundaralingam M, (1997) Crystal structures of A-DNA duplexes. Biopolymers 44: 45-63.
    • (1997) Biopolymers , vol.44 , pp. 45-63
    • Wahl, M.C.1    Sundaralingam, M.2
  • 33
    • 0024363293 scopus 로고
    • The molecular structure of the left-handed Z-DNA double helix at 1.0-A atomic resolution: Geometry, conformation, and ionic interactions of d(CGCGCG)
    • Gessner RV, Frederick CA, Quigley GJ, Rich A, Wang AH-J, (1989) The molecular structure of the left-handed Z-DNA double helix at 1.0-A atomic resolution: Geometry, conformation, and ionic interactions of d(CGCGCG). J Biol Chem 264: 7921-7935.
    • (1989) J Biol Chem , vol.264 , pp. 7921-7935
    • Gessner, R.V.1    Frederick, C.A.2    Quigley, G.J.3    Rich, A.4    Wang, A.H.-J.5
  • 34
    • 36048994278 scopus 로고    scopus 로고
    • The X-ray crystallographic study of the conformation of Z-DNA which bound to polyamine for the minor groove at room temperature and low temperature
    • Ohishi H, Ishida T, Suzuki K, Grzeskowiak K, Odoko M, et al. (2004) The X-ray crystallographic study of the conformation of Z-DNA which bound to polyamine for the minor groove at room temperature and low temperature. Nucleic Acids Symp Ser 48: 255-256.
    • (2004) Nucleic Acids Symp Ser , vol.48 , pp. 255-256
    • Ohishi, H.1    Ishida, T.2    Suzuki, K.3    Grzeskowiak, K.4    Odoko, M.5
  • 35
    • 0008875663 scopus 로고
    • Structural analysis of spermine and magnesium ion binding to yeast phenylalanine transfer RNA
    • Quigley GJ, Teeter MM, Rich A, (1978) Structural analysis of spermine and magnesium ion binding to yeast phenylalanine transfer RNA. Proc Natl Acad Sci USA 75: 64-68.
    • (1978) Proc Natl Acad Sci USA , vol.75 , pp. 64-68
    • Quigley, G.J.1    Teeter, M.M.2    Rich, A.3
  • 36
    • 0034598941 scopus 로고    scopus 로고
    • Thermodynamics of DNA binding and condensation:Isothermal titration calorimetry and electrostatic mechanism
    • Matulis D, Rouzina I, Bloomfield VA, (2000) Thermodynamics of DNA binding and condensation:Isothermal titration calorimetry and electrostatic mechanism. J Mol Biol 296: 1053-1063.
    • (2000) J Mol Biol , vol.296 , pp. 1053-1063
    • Matulis, D.1    Rouzina, I.2    Bloomfield, V.A.3
  • 37
    • 84868460020 scopus 로고    scopus 로고
    • Thermodynamics of the DNA binding of biogenic polyamines: Calorimetric and spectroscopic investigations
    • Kabir A, Hossain M, Suresh Kumar G, (2013) Thermodynamics of the DNA binding of biogenic polyamines: Calorimetric and spectroscopic investigations. J Chem Thermodyn 57: 445-453.
    • (2013) J Chem Thermodyn , vol.57 , pp. 445-453
    • Kabir, A.1    Hossain, M.2    Suresh Kumar, G.3
  • 38
    • 34547840328 scopus 로고    scopus 로고
    • Specific binding and self-structure induction to poly(A) by the cytotoxic plant alkaloid sanguinarine
    • Giri P, Suresh Kumar G, (2007) Specific binding and self-structure induction to poly(A) by the cytotoxic plant alkaloid sanguinarine. Biochim Biophys Acta 1770: 1419-1426.
    • (2007) Biochim Biophys Acta , vol.1770 , pp. 1419-1426
    • Giri, P.1    Suresh Kumar, G.2
  • 39
    • 44149108423 scopus 로고    scopus 로고
    • Self-structure induction in single stranded poly(A) by small molecules: Studies on DNA intercalators, partial intercalators and groove binding molecules
    • Giri P, Suresh Kumar G, (2008) Self-structure induction in single stranded poly(A) by small molecules: Studies on DNA intercalators, partial intercalators and groove binding molecules. Arch Biochem Biophys 474: 183-192.
    • (2008) Arch Biochem Biophys , vol.474 , pp. 183-192
    • Giri, P.1    Suresh Kumar, G.2
  • 40
    • 38749106626 scopus 로고    scopus 로고
    • Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A)
    • Giri P, Suresh Kumar G, (2008) Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A). J Photochem Photobiol A Chem 194: 111-121.
    • (2008) J Photochem Photobiol A Chem , vol.194 , pp. 111-121
    • Giri, P.1    Suresh Kumar, G.2
  • 41
    • 80054873574 scopus 로고    scopus 로고
    • Binding of the phenothiazinium dye methylene blue with single stranded polyriboadenylic acid
    • Hossain M, Kabir A, Suresh Kumar G, (2012) Binding of the phenothiazinium dye methylene blue with single stranded polyriboadenylic acid. Dyes and Pigments 92: 1376-1383.
    • (2012) Dyes and Pigments , vol.92 , pp. 1376-1383
    • Hossain, M.1    Kabir, A.2    Suresh Kumar, G.3
  • 42
    • 62949226596 scopus 로고    scopus 로고
    • DNA binding of benzophenanthridine compounds sanguinarine versus ethidium: Comparative binding and thermodynamic profile of intercalation
    • Hossain M, Suresh Kumar G, (2009) DNA binding of benzophenanthridine compounds sanguinarine versus ethidium: Comparative binding and thermodynamic profile of intercalation. J Chem Thermodyn 41: 764-774.
    • (2009) J Chem Thermodyn , vol.41 , pp. 764-774
    • Hossain, M.1    Suresh Kumar, G.2
  • 44
    • 0242361215 scopus 로고    scopus 로고
    • Protonated forms of poly[d(G-C)] and poly(dG).poly(dC) and their interaction with berberine
    • Suresh Kumar G, Das S, Bhadra K, Maiti M, (2003) Protonated forms of poly[d(G-C)] and poly(dG).poly(dC) and their interaction with berberine. Biorg Med Chem 11: 4861-4870.
    • (2003) Biorg Med Chem , vol.11 , pp. 4861-4870
    • Suresh Kumar, G.1    Das, S.2    Bhadra, K.3    Maiti, M.4
  • 45
    • 4143080522 scopus 로고    scopus 로고
    • Energetics of drug-DNA interactions
    • Chaires JB, (1997) Energetics of drug-DNA interactions. Biopolymers 44: 201-215.
    • (1997) Biopolymers , vol.44 , pp. 201-215
    • Chaires, J.B.1
  • 46
    • 60649106752 scopus 로고    scopus 로고
    • RNA targeting through binding of small molecules: Studies on t-RNA binding by the cytotoxic protoberberine alkaloid coralyne
    • Islam MM, Pandya P, Kumar S, Suresh Kumar G, (2009) RNA targeting through binding of small molecules: Studies on t-RNA binding by the cytotoxic protoberberine alkaloid coralyne. Mol Bio Syst 5: 244-254.
    • (2009) Mol Bio Syst , vol.5 , pp. 244-254
    • Islam, M.M.1    Pandya, P.2    Kumar, S.3    Suresh Kumar, G.4
  • 47
    • 61949239352 scopus 로고    scopus 로고
    • Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides
    • Islam MM, Roy Chowdhury S, Suresh Kumar G, (2009) Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides. J Phys Chem B 113: 1210-1224.
    • (2009) J Phys Chem B , vol.113 , pp. 1210-1224
    • Islam, M.M.1    Roy Chowdhury, S.2    Suresh Kumar, G.3
  • 48
    • 70349973209 scopus 로고    scopus 로고
    • DNA intercalation of methylene blue and quinacrine: New insights into base and sequence specificity from structural and thermodynamic studies with polynucleotides
    • Hossain M, Suresh Kumar G, (2009) DNA intercalation of methylene blue and quinacrine: New insights into base and sequence specificity from structural and thermodynamic studies with polynucleotides. Mol Biosyst 5: 1311-1322.
    • (2009) Mol Biosyst , vol.5 , pp. 1311-1322
    • Hossain, M.1    Suresh Kumar, G.2
  • 49
    • 84859420104 scopus 로고    scopus 로고
    • Synthesis of novel 9-O-N-aryl/aryl-alkyl amino carbonyl methyl substituted berberine analogs and evaluation of DNA binding aspects
    • Basu A, Jaisankar P, Suresh Kumar G, (2012) Synthesis of novel 9-O-N-aryl/aryl-alkyl amino carbonyl methyl substituted berberine analogs and evaluation of DNA binding aspects. Bioorg Med Chem 20: 2498-2505.
    • (2012) Bioorg Med Chem , vol.20 , pp. 2498-2505
    • Basu, A.1    Jaisankar, P.2    Suresh Kumar, G.3
  • 50
    • 0034713855 scopus 로고    scopus 로고
    • Energetics of DNA intercalation reactions
    • Ren J, Jenkins TC, Chaires JB, (2000) Energetics of DNA intercalation reactions. Biochemistry 39: 8439-8447.
    • (2000) Biochemistry , vol.39 , pp. 8439-8447
    • Ren, J.1    Jenkins, T.C.2    Chaires, J.B.3
  • 51
    • 33750979299 scopus 로고    scopus 로고
    • Physical and structural basis for the strong interactions of the -ImPy- central pairing motif in the polyamide f-ImPyIm
    • Buchmuelle KL, Bailey SL, Matthews DA, Taherbhai ZT, Register JK, (2006) Physical and structural basis for the strong interactions of the -ImPy- central pairing motif in the polyamide f-ImPyIm. Biochemistry 45: 13551-13565.
    • (2006) Biochemistry , vol.45 , pp. 13551-13565
    • Buchmuelle, K.L.1    Bailey, S.L.2    Matthews, D.A.3    Taherbhai, Z.T.4    Register, J.K.5
  • 52
    • 33645768556 scopus 로고    scopus 로고
    • Binding-linked protonation of a DNA minor groove agent
    • Nguyen B, Stanek J, Wilson WD, (2006) Binding-linked protonation of a DNA minor groove agent. Biophys J 90: 1319-1328.
    • (2006) Biophys J , vol.90 , pp. 1319-1328
    • Nguyen, B.1    Stanek, J.2    Wilson, W.D.3
  • 53
    • 0034655961 scopus 로고    scopus 로고
    • Nonsequence-specific DNA recognition: A structural perspective
    • Murphy FV, Churchill ME, (2000) Nonsequence-specific DNA recognition: A structural perspective. Structure 15: R83-R89.
    • (2000) Structure , vol.15
    • Murphy, F.V.1    Churchill, M.E.2
  • 54
    • 33846599391 scopus 로고    scopus 로고
    • Microcalorimetry of interaction of dihydro-imidazo-phenanthridinium (DIP)-based compounds with duplex DNA
    • Guthrie KM, Parenty ADC, Smith LV, Cronin L, Cooper A, (2007) Microcalorimetry of interaction of dihydro-imidazo-phenanthridinium (DIP)-based compounds with duplex DNA. Biophys Chem 126: 117-123.
    • (2007) Biophys Chem , vol.126 , pp. 117-123
    • Guthrie, K.M.1    Parenty, A.D.C.2    Smith, L.V.3    Cronin, L.4    Cooper, A.5
  • 55
    • 0024378717 scopus 로고
    • Role of the hydrophobic effect in stability of site-specific protein-DNA complexes
    • Ha JH, Spolar RS, Record MT, (1989) Role of the hydrophobic effect in stability of site-specific protein-DNA complexes. J Mol Biol 209: 801-816.
    • (1989) J Mol Biol , vol.209 , pp. 801-816
    • Ha, J.H.1    Spolar, R.S.2    Record, M.T.3
  • 56
    • 0034435652 scopus 로고    scopus 로고
    • Structural and thermodynamic strategies for site-specific DNA binding proteins
    • Jen-Jacobson L, Engler LE, Jacobson LA, (2000) Structural and thermodynamic strategies for site-specific DNA binding proteins. Structure 8: 1015-1023.
    • (2000) Structure , vol.8 , pp. 1015-1023
    • Jen-Jacobson, L.1    Engler, L.E.2    Jacobson, L.A.3
  • 57
    • 33747802145 scopus 로고    scopus 로고
    • A thermodynamic signature for drug-DNA binding mode
    • Chaires JB, (2006) A thermodynamic signature for drug-DNA binding mode. Arch Biochem Biophys 453: 26-31.
    • (2006) Arch Biochem Biophys , vol.453 , pp. 26-31
    • Chaires, J.B.1
  • 58
    • 0017820499 scopus 로고
    • Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: The role of ion association or release, screening, and ion effects on water activity
    • Record MT Jr, Anderson CF, Lohman TM, (1978) Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: The role of ion association or release, screening, and ion effects on water activity. Q Rev Biophys 11: 103-178.
    • (1978) Q Rev Biophys , vol.11 , pp. 103-178
    • Record Jr., M.T.1    Anderson, C.F.2    Lohman, T.M.3
  • 60
    • 0015153612 scopus 로고
    • Statistical thermodynamics of nucleic acid melting transitions with coupled binding equilibria
    • Crothers DM, (1971) Statistical thermodynamics of nucleic acid melting transitions with coupled binding equilibria. Biopolymers 10: 2147-2160.
    • (1971) Biopolymers , vol.10 , pp. 2147-2160
    • Crothers, D.M.1
  • 61
    • 0017887055 scopus 로고
    • DNA condensation with polyamines: I. Spectroscopic studies
    • Gosule LC, Schellman JA, (1978) DNA condensation with polyamines: I. Spectroscopic studies. J Mol Biol 121: 311-326.
    • (1978) J Mol Biol , vol.121 , pp. 311-326
    • Gosule, L.C.1    Schellman, J.A.2
  • 62
    • 28844436476 scopus 로고    scopus 로고
    • The binding of DNA intercalating and non-intercalating compounds to A-form and protonated form of poly(rC)·poly(rG): Spectroscopic and viscometric study
    • Sinha R, Islam MM, Bhadra K, Suresh Kumar G, Banerjee A, et al. (2006) The binding of DNA intercalating and non-intercalating compounds to A-form and protonated form of poly(rC)·poly(rG): Spectroscopic and viscometric study. Bioorg Med Chem 14: 800-814.
    • (2006) Bioorg Med Chem , vol.14 , pp. 800-814
    • Sinha, R.1    Islam, M.M.2    Bhadra, K.3    Suresh Kumar, G.4    Banerjee, A.5


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