메뉴 건너뛰기




Volumn 1829, Issue 9, 2013, Pages 963-969

Histone acetylation contributes to chromatin looping between the locus control region and globin gene by influencing hypersensitive site formation

Author keywords

Globin locus; Chromatin loop; Histone acetylation; Hypersensitive site; Transcription

Indexed keywords

DEOXYRIBONUCLEASE I; E1A ASSOCIATED P300 PROTEIN; GLOBIN; HEMOGLOBIN BETA CHAIN; HISTONE ACETYLTRANSFERASE; IMMUNOGLOBULIN;

EID: 84880390752     PISSN: 18749399     EISSN: 18764320     Source Type: Journal    
DOI: 10.1016/j.bbagrm.2013.04.006     Document Type: Article
Times cited : (13)

References (42)
  • 1
    • 53249121024 scopus 로고    scopus 로고
    • Long range chromatin interactions involved in gene regulation
    • Bartkuhn M., Renkawitz R. Long range chromatin interactions involved in gene regulation. Biochim. Biophys. Acta 2008, 1783:2161-2166.
    • (2008) Biochim. Biophys. Acta , vol.1783 , pp. 2161-2166
    • Bartkuhn, M.1    Renkawitz, R.2
  • 2
    • 79954510417 scopus 로고    scopus 로고
    • In the loop: long range chromatin interactions and gene regulation
    • Dean A. In the loop: long range chromatin interactions and gene regulation. Brief. Funct. Genomics 2011, 10:3-10.
    • (2011) Brief. Funct. Genomics , vol.10 , pp. 3-10
    • Dean, A.1
  • 5
    • 0036923833 scopus 로고    scopus 로고
    • Looping and interaction between hypersensitive sites in the active β-globin locus
    • Tolhuis B., Palstra R.J., Splinter E., Grosveld F., de Laat W. Looping and interaction between hypersensitive sites in the active β-globin locus. Mol. Cell 2002, 10:1453-1465.
    • (2002) Mol. Cell , vol.10 , pp. 1453-1465
    • Tolhuis, B.1    Palstra, R.J.2    Splinter, E.3    Grosveld, F.4    de Laat, W.5
  • 6
    • 84857234389 scopus 로고    scopus 로고
    • Chromatin structure of the LCR in the human β-globin locus transcribing the adult δ- and β-globin genes
    • Kim S., Kim Y.W., Shim S.H., Kim C.G., Kim A. Chromatin structure of the LCR in the human β-globin locus transcribing the adult δ- and β-globin genes. Int. J. Biochem. Cell Biol. 2012, 44:505-513.
    • (2012) Int. J. Biochem. Cell Biol. , vol.44 , pp. 505-513
    • Kim, S.1    Kim, Y.W.2    Shim, S.H.3    Kim, C.G.4    Kim, A.5
  • 8
    • 80052429874 scopus 로고    scopus 로고
    • The distinctive roles of erythroid specific activator GATA-1 and NF-E2 in transcription of the human fetal γ-globin genes
    • Kim Y.W., Kim S., Kim C.G., Kim A. The distinctive roles of erythroid specific activator GATA-1 and NF-E2 in transcription of the human fetal γ-globin genes. Nucleic Acids Res. 2011, 39:6944-6955.
    • (2011) Nucleic Acids Res. , vol.39 , pp. 6944-6955
    • Kim, Y.W.1    Kim, S.2    Kim, C.G.3    Kim, A.4
  • 11
    • 84862777531 scopus 로고    scopus 로고
    • Insulators, long-range interactions, and genome function
    • Yang J., Corces V.G. Insulators, long-range interactions, and genome function. Curr. Opin. Genet. Dev. 2012, 22:86-92.
    • (2012) Curr. Opin. Genet. Dev. , vol.22 , pp. 86-92
    • Yang, J.1    Corces, V.G.2
  • 13
    • 58149498240 scopus 로고    scopus 로고
    • CTCF-dependent enhancer-blocking by alternative chromatin loop formation
    • Hou C., Zhao H., Tanimoto K., Dean A. CTCF-dependent enhancer-blocking by alternative chromatin loop formation. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:20398-20403.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 20398-20403
    • Hou, C.1    Zhao, H.2    Tanimoto, K.3    Dean, A.4
  • 14
    • 33751434816 scopus 로고    scopus 로고
    • Cooperativeness of the higher chromatin structure of the β-globin locus revealed by the deletion mutations of DNase I hypersensitive site 3 of the LCR
    • Fang X., Xiang P., Yin W., Stamatoyannopoulos G., Li Q. Cooperativeness of the higher chromatin structure of the β-globin locus revealed by the deletion mutations of DNase I hypersensitive site 3 of the LCR. J. Mol. Biol. 2007, 365:31-37.
    • (2007) J. Mol. Biol. , vol.365 , pp. 31-37
    • Fang, X.1    Xiang, P.2    Yin, W.3    Stamatoyannopoulos, G.4    Li, Q.5
  • 15
    • 77649261872 scopus 로고    scopus 로고
    • Cell type specificity of chromatin organization mediated by CTCF and cohesin
    • Hou C., Dale R., Dean A. Cell type specificity of chromatin organization mediated by CTCF and cohesin. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:3651-3656.
    • (2010) Proc. Natl. Acad. Sci. U. S. A. , vol.107 , pp. 3651-3656
    • Hou, C.1    Dale, R.2    Dean, A.3
  • 19
    • 78751611793 scopus 로고    scopus 로고
    • Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation
    • Jin Q., Yu L.R., Wang L., Zhang Z., Kasper L.H., Lee J.E., Wang C., Brindle P.K., Dent S.Y., Ge K. Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation. EMBO J. 2011, 30:249-262.
    • (2011) EMBO J. , vol.30 , pp. 249-262
    • Jin, Q.1    Yu, L.R.2    Wang, L.3    Zhang, Z.4    Kasper, L.H.5    Lee, J.E.6    Wang, C.7    Brindle, P.K.8    Dent, S.Y.9    Ge, K.10
  • 21
    • 77955092505 scopus 로고    scopus 로고
    • Sequential changes in chromatin structure during transcriptional activation in the β globin LCR and its target gene
    • Kim K., Kim A. Sequential changes in chromatin structure during transcriptional activation in the β globin LCR and its target gene. Int. J. Biochem. Cell Biol. 2010, 42:1517-1524.
    • (2010) Int. J. Biochem. Cell Biol. , vol.42 , pp. 1517-1524
    • Kim, K.1    Kim, A.2
  • 23
    • 2342512015 scopus 로고    scopus 로고
    • Developmental stage differences in chromatin sub-domains of the β-globin locus
    • Kim A., Dean A. Developmental stage differences in chromatin sub-domains of the β-globin locus. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:7028-7033.
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 7028-7033
    • Kim, A.1    Dean, A.2
  • 24
    • 28444439242 scopus 로고    scopus 로고
    • A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in β-globin expression and erythroid development
    • Bultman S.J., Gebuhr T.C., Magnuson T. A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in β-globin expression and erythroid development. Genes Dev. 2005, 19:2849-2861.
    • (2005) Genes Dev. , vol.19 , pp. 2849-2861
    • Bultman, S.J.1    Gebuhr, T.C.2    Magnuson, T.3
  • 25
    • 0037317298 scopus 로고    scopus 로고
    • Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1
    • Letting D.L., Rakowski C., Weiss M.J., Blobel G.A. Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1. Mol. Cell. Biol. 2003, 23:1334-1340.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 1334-1340
    • Letting, D.L.1    Rakowski, C.2    Weiss, M.J.3    Blobel, G.A.4
  • 28
    • 0030606239 scopus 로고    scopus 로고
    • The transcriptional coactivators p300 and CBP are histone acetyltransferases
    • Ogryzko V.V., Schiltz R.L., Russanova V., Howard B.H., Nakatani Y. The transcriptional coactivators p300 and CBP are histone acetyltransferases. Cell 1996, 87:953-959.
    • (1996) Cell , vol.87 , pp. 953-959
    • Ogryzko, V.V.1    Schiltz, R.L.2    Russanova, V.3    Howard, B.H.4    Nakatani, Y.5
  • 29
    • 0030480969 scopus 로고    scopus 로고
    • The CBP co-activator is a histone acetyltransferase
    • Bannister A.J., Kouzarides T. The CBP co-activator is a histone acetyltransferase. Nature 1996, 384:641-643.
    • (1996) Nature , vol.384 , pp. 641-643
    • Bannister, A.J.1    Kouzarides, T.2
  • 30
    • 34848909389 scopus 로고    scopus 로고
    • Nucleosome and transcription activator antagonism at human β-globin locus control region DNase I hypersensitive sites
    • Kim A., Song S.H., Brand M., Dean A. Nucleosome and transcription activator antagonism at human β-globin locus control region DNase I hypersensitive sites. Nucleic Acids Res. 2007, 35:5831-5838.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 5831-5838
    • Kim, A.1    Song, S.H.2    Brand, M.3    Dean, A.4
  • 31
    • 79651470430 scopus 로고    scopus 로고
    • Characterization of histone H3K27 modifications in the β-globin locus
    • Kim Y.W., Kim A. Characterization of histone H3K27 modifications in the β-globin locus. Biochem. Biophys. Res. Commun. 2011, 405:210-215.
    • (2011) Biochem. Biophys. Res. Commun. , vol.405 , pp. 210-215
    • Kim, Y.W.1    Kim, A.2
  • 32
    • 77953973940 scopus 로고    scopus 로고
    • Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes
    • Pasini D., Malatesta M., Jung H.R., Walfridsson J., Willer A., Olsson L., Skotte J., Wutz A., Porse B., Jensen O.N., Helin K. Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes. Nucleic Acids Res. 2010, 38:4958-4969.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 4958-4969
    • Pasini, D.1    Malatesta, M.2    Jung, H.R.3    Walfridsson, J.4    Willer, A.5    Olsson, L.6    Skotte, J.7    Wutz, A.8    Porse, B.9    Jensen, O.N.10    Helin, K.11
  • 34
    • 77449109789 scopus 로고    scopus 로고
    • Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases
    • Bedford D.C., Kasper L.H., Fukuyama T., Brindle P.K. Target gene context influences the transcriptional requirement for the KAT3 family of CBP and p300 histone acetyltransferases. Epigenetics 2010, 5:9-15.
    • (2010) Epigenetics , vol.5 , pp. 9-15
    • Bedford, D.C.1    Kasper, L.H.2    Fukuyama, T.3    Brindle, P.K.4
  • 36
    • 0035815105 scopus 로고    scopus 로고
    • Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites
    • Anderson J.D., Lowary P.T., Widom J. Effects of histone acetylation on the equilibrium accessibility of nucleosomal DNA target sites. J. Mol. Biol. 2001, 307:977-985.
    • (2001) J. Mol. Biol. , vol.307 , pp. 977-985
    • Anderson, J.D.1    Lowary, P.T.2    Widom, J.3
  • 37
    • 0032539694 scopus 로고    scopus 로고
    • Reconstitution of hyperacetylated, DNase I-sensitive chromatin characterized by high conformational flexibility of nucleosomal DNA
    • Krajewski W.A., Becker P.B. Reconstitution of hyperacetylated, DNase I-sensitive chromatin characterized by high conformational flexibility of nucleosomal DNA. Proc. Natl. Acad. Sci. U. S. A. 1998, 95:1540-1545.
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 1540-1545
    • Krajewski, W.A.1    Becker, P.B.2
  • 38
    • 0038094502 scopus 로고    scopus 로고
    • Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter
    • Reinke H., Hörz W. Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter. Mol. Cell 2003, 11:1599-1607.
    • (2003) Mol. Cell , vol.11 , pp. 1599-1607
    • Reinke, H.1    Hörz, W.2
  • 39
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides T. Chromatin modifications and their function. Cell 2007, 128:693-705.
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 42
    • 34447536151 scopus 로고    scopus 로고
    • β-globin active chromatin Hub formation in differentiating erythroid cells and in p45 NF-E2 knock-out mice
    • Kooren J., Palstra R.J., Klous P., Splinter E., von Lindern M., Grosveld F., de Laat W. β-globin active chromatin Hub formation in differentiating erythroid cells and in p45 NF-E2 knock-out mice. J. Biol. Chem. 2007, 282:16544-16552.
    • (2007) J. Biol. Chem. , vol.282 , pp. 16544-16552
    • Kooren, J.1    Palstra, R.J.2    Klous, P.3    Splinter, E.4    von Lindern, M.5    Grosveld, F.6    de Laat, W.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.