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Volumn 93, Issue 1, 2013, Pages 54-66

Identifying darwinian selection acting on different human apol1 variants among diverse african populations

Author keywords

[No Author keywords available]

Indexed keywords

APOL1 PROTEIN; DNA; MEMBRANE PROTEIN; NUCLEOTIDE; PROTEIN G1; PROTEIN G2; UNCLASSIFIED DRUG;

EID: 84880274181     PISSN: 00029297     EISSN: 15376605     Source Type: Journal    
DOI: 10.1016/j.ajhg.2013.05.014     Document Type: Article
Times cited : (84)

References (60)
  • 1
    • 72849122933 scopus 로고    scopus 로고
    • From evolutionary genetics to human immunology: How selection shapes host defence genes
    • L.B. Barreiro, and L. Quintana-Murci From evolutionary genetics to human immunology: how selection shapes host defence genes Nat. Rev. Genet. 11 2010 17 30
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 17-30
    • Barreiro, L.B.1    Quintana-Murci, L.2
  • 3
    • 0000192486 scopus 로고
    • Sickle cell anemia a molecular disease
    • L. Pauling, H.A. Itano, and I. Wells Sickle cell anemia a molecular disease Science 110 1949 543 548
    • (1949) Science , vol.110 , pp. 543-548
    • Pauling, L.1    Itano, H.A.2    Wells, I.3
  • 5
    • 77049164783 scopus 로고
    • Protection afforded by sickle-cell trait against subtertian malareal infection
    • A.C. Allison Protection afforded by sickle-cell trait against subtertian malareal infection BMJ 1 1954 290 294
    • (1954) BMJ , vol.1 , pp. 290-294
    • Allison, A.C.1
  • 6
    • 0014212745 scopus 로고
    • Glucose-6-phosphate-dehydrogenase deficiency, sickling, and malaria in African children in South Western Nigeria
    • H.M. Gilles, K.A. Fletcher, R.G. Hendrickse, R. Lindner, S. Reddy, and N. Allan Glucose-6-phosphate-dehydrogenase deficiency, sickling, and malaria in African children in South Western Nigeria Lancet 1 1967 138 140
    • (1967) Lancet , vol.1 , pp. 138-140
    • Gilles, H.M.1    Fletcher, K.A.2    Hendrickse, R.G.3    Lindner, R.4    Reddy, S.5    Allan, N.6
  • 7
    • 0014680915 scopus 로고
    • Glucose-6-phosphate dehydrogenase deficient red cells: Resistance to infection by malarial parasites
    • L. Luzzatto, F.A. Usanga, and S. Reddy Glucose-6-phosphate dehydrogenase deficient red cells: resistance to infection by malarial parasites Science 164 1969 839 842
    • (1969) Science , vol.164 , pp. 839-842
    • Luzzatto, L.1    Usanga, F.A.2    Reddy, S.3
  • 11
    • 0036014946 scopus 로고    scopus 로고
    • Cumulative risk for developing end-stage renal disease in the US population
    • DOI 10.1097/01.ASN.0000014251.87778.01
    • B.A. Kiberd, and C.M. Clase Cumulative risk for developing end-stage renal disease in the US population J. Am. Soc. Nephrol. 13 2002 1635 1644 (Pubitemid 34579252)
    • (2002) Journal of the American Society of Nephrology , vol.13 , Issue.6 , pp. 1635-1644
    • Kiberd, B.A.1    Clase, C.M.2
  • 12
    • 0037248734 scopus 로고    scopus 로고
    • HIV-associated nephropathy in African Americans
    • J.B. Kopp, and C. Winkler HIV-associated nephropathy in African Americans Kidney Int. Suppl. 63 2003 S43 S49
    • (2003) Kidney Int. Suppl. , vol.63
    • Kopp, J.B.1    Winkler, C.2
  • 13
    • 7444265771 scopus 로고    scopus 로고
    • Twenty-one-year trend in ESRD due to focal segmental glomerulosclerosis in the United States
    • DOI 10.1053/j.ajkd.2004.07.008, PII S0272638604010819
    • C. Kitiyakara, P. Eggers, and J.B. Kopp Twenty-one-year trend in ESRD due to focal segmental glomerulosclerosis in the United States Am. J. Kidney Dis. 44 2004 815 825 (Pubitemid 39445913)
    • (2004) American Journal of Kidney Diseases , vol.44 , Issue.5 , pp. 815-825
    • Kitiyakara, C.1    Eggers, P.2    Kopp, J.B.3
  • 14
    • 16644394042 scopus 로고    scopus 로고
    • Proteinuria and hypertensive nephrosclerosis in African Americans
    • R.D. Toto Proteinuria and hypertensive nephrosclerosis in African Americans Kidney Int. Suppl. 66 2004 S102 S104
    • (2004) Kidney Int. Suppl. , vol.66
    • Toto, R.D.1
  • 17
    • 34248573475 scopus 로고    scopus 로고
    • A multiethnic, multicenter cohort of patients with Systemic Lupus Erythematosus (SLE) as a model for the study of ethnic disparities in SLE
    • DOI 10.1002/art.22672
    • M. Fernández, G.S. Alarcón, J. Calvo-Alén, R. Andrade, G. McGwin Jr., L.M. Vilá, J.D. Reveille LUMINA Study Group A multiethnic, multicenter cohort of patients with systemic lupus erythematosus (SLE) as a model for the study of ethnic disparities in SLE Arthritis Rheum. 57 2007 576 584 (Pubitemid 46764046)
    • (2007) Arthritis Care and Research , vol.57 , Issue.4 , pp. 576-584
    • Fernandez, M.1    Alarcon, G.S.2    Calvo-Alen, J.3    Andrade, R.4    McGwin Jr., G.5    Vila, L.M.6    Reveille, J.D.7
  • 18
    • 84855839041 scopus 로고    scopus 로고
    • United State Renal Data System USRD National Institutes of Health, National Institute of Diabetes and Digestive and Kidney Diseases Bethesda
    • United State Renal Data System USRD Annual Data Report: Atlas of Chronic Kidney Disease and End-Stage Renal Disease in the United States 2011 National Institutes of Health, National Institute of Diabetes and Digestive and Kidney Diseases Bethesda
    • (2011) Annual Data Report: Atlas of Chronic Kidney Disease and End-Stage Renal Disease in the United States
  • 19
    • 80052191652 scopus 로고    scopus 로고
    • Heritability, weak effects, and rare variants in genomewide association studies
    • F. Cambien Heritability, weak effects, and rare variants in genomewide association studies Clin. Chem. 57 2011 1263 1266
    • (2011) Clin. Chem. , vol.57 , pp. 1263-1266
    • Cambien, F.1
  • 20
    • 84857190262 scopus 로고    scopus 로고
    • Human genetic susceptibility to infectious disease
    • S.J. Chapman, and A.V.S. Hill Human genetic susceptibility to infectious disease Nat. Rev. Genet. 13 2012 175 188
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 175-188
    • Chapman, S.J.1    Hill, A.V.S.2
  • 21
    • 65949104586 scopus 로고    scopus 로고
    • Genomewide association studies and human disease
    • J. Hardy, and A. Singleton Genomewide association studies and human disease N. Engl. J. Med. 360 2009 1759 1768
    • (2009) N. Engl. J. Med. , vol.360 , pp. 1759-1768
    • Hardy, J.1    Singleton, A.2
  • 26
    • 8344289092 scopus 로고    scopus 로고
    • Why trypanosomes cause sleeping sickness
    • G.B. Lundkvist, K. Kristensson, and M. Bentivoglio Why trypanosomes cause sleeping sickness Physiology (Bethesda) 19 2004 198 206 (Pubitemid 39481935)
    • (2004) Physiology , Issue.4 , pp. 198-206
    • Lundkvist, G.B.1    Kristensson, K.2    Bentivoglio, M.3
  • 30
    • 0242691208 scopus 로고    scopus 로고
    • A Comparison of Bayesian Methods for Haplotype Reconstruction from Population Genotype Data
    • DOI 10.1086/379378
    • M. Stephens, and P. Donnelly A comparison of bayesian methods for haplotype reconstruction from population genotype data Am. J. Hum. Genet. 73 2003 1162 1169 (Pubitemid 37414228)
    • (2003) American Journal of Human Genetics , vol.73 , Issue.5 , pp. 1162-1169
    • Stephens, M.1    Donnelly, P.2
  • 31
    • 0035071957 scopus 로고    scopus 로고
    • A new statistical method for haplotype reconstruction from population data
    • DOI 10.1086/319501
    • M. Stephens, N.J. Smith, and P. Donnelly A new statistical method for haplotype reconstruction from population data Am. J. Hum. Genet. 68 2001 978 989 (Pubitemid 32289743)
    • (2001) American Journal of Human Genetics , vol.68 , Issue.4 , pp. 978-989
    • Stephens, M.1    Smith, N.J.2    Donnelly, P.3
  • 32
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • G.A. Watterson On the number of segregating sites in genetical models without recombination Theor. Popul. Biol. 7 1975 256 276
    • (1975) Theor. Popul. Biol. , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 34
    • 33646226097 scopus 로고
    • Linkage disequilibrium in finite populations
    • W.G. Hill, and A. Robertson Linkage disequilibrium in finite populations Theor. Appl. Genet. 38 1968 226 231
    • (1968) Theor. Appl. Genet. , vol.38 , pp. 226-231
    • Hill, W.G.1    Robertson, A.2
  • 35
    • 85090878417 scopus 로고    scopus 로고
    • LDheatmap: An R Function for Graphical Display of Pairwise Linkage Disequilibria between Single Nucleotide Polymorphisms
    • Code Snippet 3
    • J. Shin, S. Blay, B. McNeney, and J. Graham LDheatmap: An R Function for Graphical Display of Pairwise Linkage Disequilibria between Single Nucleotide Polymorphisms J. Stat. Softw. 16 2006 Code Snippet 3
    • (2006) J. Stat. Softw. , vol.16
    • Shin, J.1    Blay, S.2    McNeney, B.3    Graham, J.4
  • 38
    • 33644974019 scopus 로고    scopus 로고
    • A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
    • P. Scheet, and M. Stephens A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase Am. J. Hum. Genet. 78 2006 629 644
    • (2006) Am. J. Hum. Genet. , vol.78 , pp. 629-644
    • Scheet, P.1    Stephens, M.2
  • 40
    • 66049149084 scopus 로고    scopus 로고
    • The apolipoprotein L family of programmed cell death and immunity genes rapidly evolved in primates at discrete sites of host-pathogen interactions
    • E.E. Smith, and H.S. Malik The apolipoprotein L family of programmed cell death and immunity genes rapidly evolved in primates at discrete sites of host-pathogen interactions Genome Res. 19 2009 850 858
    • (2009) Genome Res. , vol.19 , pp. 850-858
    • Smith, E.E.1    Malik, H.S.2
  • 43
    • 0002481078 scopus 로고    scopus 로고
    • Linkage disequilibrium and recombination
    • D. Balding, M. Bishop, C. Cannings, John Wiley & Sons New York
    • R.R. Hudson Linkage disequilibrium and recombination D. Balding, M. Bishop, C. Cannings, Handbook of statistical genetics 2001 John Wiley & Sons New York 309 324
    • (2001) Handbook of Statistical Genetics , pp. 309-324
    • Hudson, R.R.1
  • 50
    • 51449084924 scopus 로고    scopus 로고
    • The history of African trypanosomiasis
    • D. Steverding The history of African trypanosomiasis Parasit Vectors 1 2008 3
    • (2008) Parasit Vectors , vol.1 , pp. 3
    • Steverding, D.1
  • 51
    • 0032953881 scopus 로고    scopus 로고
    • Inferring the fitness effects of DNA mutations from polymorphism and divergence data: Statistical power to detect directional selection under stationarity and free recombination
    • H. Akashi Inferring the fitness effects of DNA mutations from polymorphism and divergence data: statistical power to detect directional selection under stationarity and free recombination Genetics 151 1999 221 238 (Pubitemid 29031890)
    • (1999) Genetics , vol.151 , Issue.1 , pp. 221-238
    • Akashi, H.1
  • 54
    • 77952141191 scopus 로고    scopus 로고
    • The trypanolytic factor of human serum: Many ways to enter the parasite, a single way to kill
    • B. Vanhollebeke, and E. Pays The trypanolytic factor of human serum: many ways to enter the parasite, a single way to kill Mol. Microbiol. 76 2010 806 814
    • (2010) Mol. Microbiol. , vol.76 , pp. 806-814
    • Vanhollebeke, B.1    Pays, E.2
  • 55
    • 77955927884 scopus 로고    scopus 로고
    • The trypanolytic factor-mechanism, impacts and applications
    • R.J. Wheeler The trypanolytic factor-mechanism, impacts and applications Trends Parasitol. 26 2010 457 464
    • (2010) Trends Parasitol. , vol.26 , pp. 457-464
    • Wheeler, R.J.1
  • 57
    • 77958008973 scopus 로고    scopus 로고
    • Mechanism of Trypanosoma brucei gambiense (group 1) resistance to human trypanosome lytic factor
    • R. Kieft, P. Capewell, C.M. Turner, N.J. Veitch, A. MacLeod, and S. Hajduk Mechanism of Trypanosoma brucei gambiense (group 1) resistance to human trypanosome lytic factor Proc. Natl. Acad. Sci. USA 107 2010 16137 16141
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 16137-16141
    • Kieft, R.1    Capewell, P.2    Turner, C.M.3    Veitch, N.J.4    Macleod, A.5    Hajduk, S.6
  • 59
    • 0036899166 scopus 로고    scopus 로고
    • Biological and biomedical implications of the co-evolution of pathogens and their hosts
    • DOI 10.1038/ng1202-569
    • M.E. Woolhouse, J.P. Webster, E. Domingo, B. Charlesworth, and B.R. Levin Biological and biomedical implications of the co-evolution of pathogens and their hosts Nat. Genet. 32 2002 569 577 (Pubitemid 35435167)
    • (2002) Nature Genetics , vol.32 , Issue.4 , pp. 569-577
    • Woolhouse, M.E.J.1    Webster, J.P.2    Domingo, E.3    Charlesworth, B.4    Levin, B.R.5
  • 60
    • 84880295318 scopus 로고    scopus 로고
    • Evolution of human erythrocyte-specific genes involved in malaria susceptibility
    • R.S. Singh, J. Xu, R.J. Kulathinal, Oxford University Press Oxford
    • W.-Y. Ko, F. Gomez, and S.A. Tishkoff Evolution of human erythrocyte-specific genes involved in malaria susceptibility R.S. Singh, J. Xu, R.J. Kulathinal, Rapidly Evolving Genes and Genetic Systems 2012 Oxford University Press Oxford 223 234
    • (2012) Rapidly Evolving Genes and Genetic Systems , pp. 223-234
    • Ko, W.-Y.1    Gomez, F.2    Tishkoff, S.A.3


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