RNA-seq based SNPs in some agronomically important oleiferous lines of Brassica rapa and their use for genome-wide linkage mapping and specific-region fine mapping

BMC Genomics

Volumn 14, Issue 1, 2013, Pages

  Paritosh, Kumar ^a   Yadava, Satish K ^a   Gupta, Vibha ^a   Panjabi Massand, Priya ^a   Sodhi, Yashpal S ^a   Pradhan, Akshay K ^a   Pental, Deepak ^a  

^a UNIVERSITY OF DELHI   (India)

Author keywords

Brassica rapa; Coding DNA Sequences (CDS); KASPar assays; Next generation sequencing; Paralog specific variation (PSV); RNA seq; Single nucleotide polymorphism (SNP)

Indexed keywords

CONTIG; PLANT DNA; PLANT RNA;

ARTICLE; BRASSICA RAPA; DNA FLANKING REGION; EXON; FLOWER; GENE LOCUS; GENE MAPPING; GENE TARGETING; GENETIC ANALYSIS; GENETIC DATABASE; GENETIC LINKAGE; GENETIC TRAIT; INFLORESCENCE; INTRON; MARKER GENE; NONHUMAN; PLANT LEAF; RNA ISOLATION; RNA SEQUENCE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SIMPLE SEQUENCE REPEAT; SINGLE NUCLEOTIDE POLYMORPHISM; STRAIN DIFFERENCE;

BRASSICA RAPA; CHROMOSOME MAPPING; GENETIC LINKAGE; MICROSATELLITE REPEATS; POLYMORPHISM, SINGLE NUCLEOTIDE; RNA, PLANT; SEQUENCE ANALYSIS, RNA; TRANSCRIPTOME;

BRASSICA RAPA; BRASSICA RAPA TRILOCULARIS; TETRA;

EID: 84880015641     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-463     Document Type: Article

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