Engineering gold nanoparticle interaction by PAMAM dendrimer

Journal of Physical Chemistry C

Volumn 117, Issue 26, 2013, Pages 13627-13636

  Mandal, Taraknath ^a   Dasgupta, Chandan ^a   Maiti, Prabal K ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

CLASSICAL MOLECULAR DYNAMICS; GOLD NANOPARTICLES; NANOPARTICLE INTERACTION; NANOPARTICLE SURFACE; POLYAMIDOAMINE DENDRIMERS; QUANTITATIVE ESTIMATES; SPONTANEOUS ADSORPTION; SURFACE INTERACTIONS;

GOLD; METAL NANOPARTICLES; MOLECULAR DYNAMICS;

DENDRIMERS;

EID: 84879827356     PISSN: 19327447     EISSN: 19327455     Source Type: Journal    
DOI: 10.1021/jp401218t     Document Type: Article

References (71)

1. Tomalia, D. A.; Naylor, A. M.; Goddard, W. A. Starburst Dendrimers-Molecular-Level Control of Size, Shape, Surface-Chemistry, Topology, and Flexibility from Atoms to Macroscopic Matter Angew. Chem., Int. Ed. Engl. 1990, 29, 138-175
2. Frechet, J. M. J. Functional Polymers and Dendrimers-Reactivity, Molecular Architecture, and Interfacial Energy Science 1994, 263, 1710-1715
3. Zeng, F. W.; Zimmerman, S. C. Dendrimers in Supramolecular Chemistry: From Molecular Recognition to Self-Assembly Chem. Rev. 1997, 97, 1681-1712
4. Bosman, A. W.; Janssen, H. M.; Meijer, E. W. About Dendrimers: Structure, Physical Properties, and Applications Chem. Rev. 1999, 99, 1665-1688
5. Esumi, K.; Torigoe, K. Preparation and Characterization of Noble Metal Nanoparticles Using Dendrimers As Protective Colloids Prog. Colloid. Polym. Sci. 2001, 117, 80-87
6. Esumi, K.; Suzuki, A.; Aihara, N.; Usui, K.; Torigoe, K. Preparation of Gold Colloids with UV Irradiation Using Dendrimers As Stabilizer Langmuir 1998, 14, 3157-3159
7. Balogh, L.; Tomalia, D. A. Poly(amidoamine) Dendrimer-Templated Nanocomposites. 1. Synthesis of Zerovalent Copper Nanoclusters J. Am. Chem. Soc. 1998, 120, 7355-7356
8. Zhao, M. Q.; Sun, L.; Crooks, R. M. Preparation of Cu Nanoclusters within Dendrimer Templates J. Am. Chem. Soc. 1998, 120, 4877-4878
9. Endo, T.; Yoshimura, T.; Esumi, K. Synthesis and Catalytic Activity of Gold-Silver Binary Nanoparticles Stabilized by PAMAM Dendrimer J. Colloid Interface Sci. 2005, 286, 602-609
10. Garcia, M. E.; Baker, L. A.; Crooks, R. M. Preparation and Characterization of Dendrimer-Gold Colloid Nanocomposites Anal. Chem. 1999, 71, 256-258
11. Crooks, R. M.; Zhao, M. Q.; Sun, L.; Chechik, V.; Yeung, L. K. Dendrimer-Encapsulated Metal Nanoparticles: Synthesis, Characterization, And Applications to Catalysis Acc. Chem. Res. 2001, 34, 181-190
12. Oh, S. K.; Niu, Y. H.; Crooks, R. M. Size-Selective Catalytic Activity of Pd Nanoparticles Encapsulated within End-Group Functionalized Dendrimers Langmuir 2005, 21, 10209-10213
13. Aoi, K.; Itoh, K.; Okada, M. Globular Carbohydrate Macromolecule Sugar Balls 0.1. Synthesis of Novel Sugar-Persubstituted Poly(Amido Amine) Dendrimers Macromolecules 1995, 28, 5391-5393
14. SayedSweet, Y.; Hedstrand, D. M.; Spinder, R.; Tomalia, D. A. Hydrophobically Modified Poly(amidoamine) (PAMAM) Dendrimers: Their Properties at the Air-Water Interface and Use as Nanoscopic Container Molecules J. Mater. Chem. 1997, 7, 1199-1205
15. Li, Y. J.; Dubin, P. L.; Spindler, R.; Tomalia, D. A. Complex-Formation between Poly(dimethyldiallylammonium chloride) and Carboxylated Starburst Dendrimers Macromolecules 1995, 28, 8426-8428
16. Maiti, P. K.; Cagin, T.; Wang, G. F.; Goddard, W. A. Structure of PAMAM dendrimers: Generations 1 through 11 Macromolecules 2004, 37, 6236-6254
17. Maiti, P. K.; Cagin, T.; Lin, S. T.; Goddard, W. A. Effect of Solvent and pH on the Structure of PAMAM Dendrimers Macromolecules 2005, 38, 979-991
18. Lin, S. T.; Maiti, P. K.; Goddard, W. A. Dynamics and Thermodynamics of Water in PAMAM Dendrimers at Subnanosecond Time Scales J. Phys. Chem. B 2005, 109, 8663-8672
19. Maiti, P. K.; Goddard, W. A. Solvent Quality Changes the Structure Of G8 PAMAM Dendrimer, A Disagreement with Some Experimental Interpretations J. Phys. Chem. B 2006, 110, 25628-25632
20. Maiti, P. K.; Messina, R. Counterion Distribution and Zeta-Potential in PAMAM Dendrimer Macromolecules 2008, 41, 5002-5006
21. Maiti, P. K.; Li, Y. Y.; Cagin, T.; Goddard, W. A. Structure of Polyamidoamide Dendrimers up to Limiting Generations: A Mesoscale Description J. Chem. Phys. 2009, 130, 144902
22. Maiti, P. K.; Bagchi, B. Diffusion of Flexible, Charged, Nanoscopic Molecules in Solution: Size and pH Dependence for PAMAM Dendrimer J. Chem. Phys. 2009, 131, 214901
23. Bielinska, A.; Eichman, J. D.; Lee, I.; Baker, J. R.; Balogh, L. Imaging {Au-0-PAMAM} Gold-Dendrimer Nanocomposites in Cells J. Nanopart. Res. 2002, 4, 395-403
24. Panyala, N. R.; Pena-Mendez, E. M.; Havel, J. Gold and Nano-Gold in Medicine: Overview, Toxicology and Perspectives J. Appl. Biomed. 2009, 7, 75-91
25. Srivastava, S.; Frankamp, B. L.; Rotello, V. M. Controlled Plasmon Resonance of Gold Nanoparticles Self-Assembled with PAMAM Dendrimers Chem. Mater. 2005, 17, 487-490
26. Frankamp, B. L.; Boal, A. K.; Rotello, V. M. Controlled Interparticle Spacing through Self-Assembly of Au Nanoparticles and Poly(amidoamine) Dendrimers J. Am. Chem. Soc. 2002, 124, 15146-15147
27. -, and Adenosine-5′-triphosphate (ATP(2-)) Anions J. Am. Chem. Soc. 2003, 125, 2617-2628
28. Schmid, G.; Baumle, M.; Beyer, N. Ordered Two-Dimensional Monolayers of Au-55 Clusters Angew. Chem., Int. Edit. 2000, 39, 181-183
29. Zehner, R. W.; Lopes, W. A.; Morkved, T. L.; Jaeger, H.; Sita, L. R. Selective Decoration of a Phase-Separated Diblock Copolymer with Thiol-Passivated Gold Nanocrystals Langmuir 1998, 14, 241-244
30. Bockstaller, M. R.; Lapetnikov, Y.; Margel, S.; Thomas, E. L. Size-Selective Organization of Enthalpic Compatibilized Nanocrystals in Ternary Block Copolymer/Particle Mixtures J. Am. Chem. Soc. 2003, 125, 5276-5277
31. Shenhar, R.; Jeoung, E.; Srivastava, S.; Norsten, T. B.; Rotello, V. M. Crosslinked Nanoparticle Stripes and Hexagonal Networks Obtained via Selective Patterning of Block Copolymer Thin Films Adv. Mater. 2005, 17, 2206-2210
32. Boal, A. K.; Ilhan, F.; DeRouchey, J. E.; Thurn-Albrecht, T.; Russell, T. P.; Rotello, V. M. Self-Assembly of Nanoparticles into Structured Spherical and Network Aggregates Nature 2000, 404, 746-748
33. Cui, H. G.; Chen, Z. Y.; Zhong, S.; Wooley, K. L.; Pochan, D. J. Block Copolymer Assembly via Kinetic Control Science 2007, 317, 647-650
34. Nie, Z. H.; Fava, D.; Kumacheva, E.; Zou, S.; Walker, G. C.; Rubinstein, M. Self-Assembly of Metal-Polymer Analogues of Amphiphilic Triblock Copolymers Nat. Mater. 2007, 6, 609-614
35. Ofir, Y.; Samanta, B.; Rotello, V. M. Polymer and biopolymer mediated self-assembly of gold nanoparticles Chem. Soc. Rev. 2008, 37, 1814-1823
36. Mirkin, C. A.; Mucic, R. C.; Storhoff, J. J.; Letsinger, R. L. DNA-Induced Assembly of Gold Nanoparticles: A Method for Rationally Organizing Colloidal Particles into Ordered Macroscopic Materials Abstr. Pap. Am. Chem. Soc. 1996, 212, 249-INOR
37. Deng, Z. X.; Tian, Y.; Lee, S. H.; Ribbe, A. E.; Mao, C. D. DNA-Encoded Self-Assembly of Gold Nanoparticles into One-Dimensional Arrays Angew. Chem., Int. Ed. 2005, 44, 3582-3585
38. Alivisatos, A. P.; Johnsson, K. P.; Peng, X. G.; Wilson, T. E.; Loweth, C. J.; Bruchez, M. P.; Schultz, P. G. Organization of 'Nanocrystal Molecules' Using DNA Nature 1996, 382, 609-611
39. Loweth, C. J.; Caldwell, W. B.; Peng, X. G.; Alivisatos, A. P.; Schultz, P. G. DNA-Based Assembly of Gold Nanocrystals Angew. Chem.-Int. Edit. 1999, 38, 1808-1812
40. Aldaye, F. A.; Sleiman, H. F. Dynamic DNA Templates for Discrete Gold Nanoparticle Assemblies: Control of Geometry, Modularity, Write/Wrase and Structural Switching J. Am. Chem. Soc. 2007, 129, 4130-4131
41. Li, H. Y.; Park, S. H.; Reif, J. H.; LaBean, T. H.; Yan, H. DNA-Templated Self-Assembly of Protein and Nanoparticle Linear Arrays J. Am. Chem. Soc. 2004, 126, 418-419
42. Niemeyer, C. M.; Ceyhan, B. DNA-Directed Functionalization of Colloidal Gold with Proteins Angew. Chem.-Int. Edit. 2001, 40, 3685-3688
43. Zhang, J. P.; Liu, Y.; Ke, Y. G.; Yan, H. Periodic Square-Like Gold Nanoparticle Arrays Templated by Self-Assembled 2D DNA Nanogrids on a Surface Nano Lett. 2006, 6, 248-251
44. Le, J. D.; Pinto, Y.; Seeman, N. C.; Musier-Forsyth, K.; Taton, T. A.; Kiehl, R. A. DNA-Templated Self-Assembly of Metallic Nanocomponent Arrays on a Surface Nano Lett. 2004, 4, 2343-2347
45. Wang, G. L.; Murray, R. W. Controlled Assembly of Monolayer-Protected Gold Clusters by Dissolved DNA Nano Lett. 2004, 4, 95-101
46. Nakao, H.; Shiigi, H.; Yamamoto, Y.; Tokonami, S.; Nagaoka, T.; Sugiyama, S.; Ohtani, T. Highly Ordered Assemblies of Au Nanoparticles Organized on DNA Nano Lett. 2003, 3, 1391-1394
47. Patolsky, F.; Weizmann, Y.; Lioubashevski, O.; Willner, I. Au-Nanoparticle Nanowires Based on DNA and Polylysine Templates Angew. Chem., Int. Ed. 2002, 41, 2323-2327
48. Ganguli, M.; Babu, J. V.; Maiti, S. Complex Formation between Cationically Modified Gold Nanoparticles and DNA: an Atomic Force Microscopic Study Langmuir 2004, 20, 5165-5170
49. Srivastava, S.; Verma, A.; Frankamp, B. L.; Rotello, V. M. Controlled Assembly of Protein-Nanoparticle Composites through Protein Surface Recognition Adv. Mater. 2005, 17, 617-621
50. Loo, L.; Guenther, R. H.; Lommel, S. A.; Franzen, S. Encapsidation of Nanoparticles by Red Clover Necrotic Mosaic Virus J. Am. Chem. Soc. 2007, 129, 11111-11117
51. Verma, A.; Srivastava, S.; Rotello, V. M. Modulation of the Interparticle Spacing and Optical Behavior of Nanoparticle Ensembles Using a Single Protein Spacer Chem. Mater. 2005, 17, 6317-6322
52. Frankamp, B. L.; Boal, A. K.; Tuominen, M. T.; Rotello, V. M. Direct control of the magnetic interaction between iron oxide nanoparticles through dendrimer-mediated self-assembly J. Am. Chem. Soc. 2005, 127, 9731-9735
53. Halder, A.; Ravishankar, N. Ultrafine Single-Crystalline Gold Nanowire Arrays by Oriented Attachment Adv. Mater. 2007, 19, 1854-1858
54. Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. Comparison of Simple Potential Functions for Simulating Liquid Water J. Chem. Phys. 1983, 79, 926-935
55. Pearlman, D. A.; Case, D. A.; Caldwell, J. W.; Ross, W. S.; Cheatham, T. E.; Debolt, S.; Ferguson, D.; Seibel, G.; Kollman, P. Amber, a Package of Computer-Programs for Applying Molecular Mechanics, Normal-Mode Analysis, Molecular-Dynamics and Free-Energy Calculations to Simulate the Structural and Energetic Properties of Molecules Comput. Phys. Commun. 1995, 91, 1-41
56. Agrawal, P. M.; Rice, B. M.; Thompson, D. L. Predicting Trends in Rate Parameters for Self-Diffusion on FCC Metal Surfaces Surf. Sci. 2002, 515, 21-35
57. Lee, O. S.; Schatz, G. C. Molecular Dynamics Simulation of DNA-Functionalized Gold Nanoparticles J. Phys. Chem. C 2009, 113, 2316-2321
58. Lee, O. S.; Schatz, G. C. Interaction between DNAs on a Gold Surface J. Phys. Chem. C 2009, 113, 15941-15947
59. Ngo, V. A.; Kalia, R. K.; Nakano, A.; Vashishta, P. Supercrystals of DNA-Functionalized Gold Nanoparticles: A Million-Atom Molecular Dynamics Simulation Study J. Phys. Chem. C 2012, 116, 19579-19585
60. Xu, J.; Craig, S. L. Influence of the Extent of Hybridization on the Hydrodynamic Radius of DNA-Functionalized Gold Nanoparticles Langmuir 2007, 23, 2015-2020
61. Park, S.; Hamad-Schifferli, K. Evaluation of Hydrodynamic Size and Zeta-Potential of Surface-Modified an Nanoparticle-DNA Conjugates via Ferguson analysis J. Phys. Chem. C 2008, 112, 7611-7616
62. Wang, J. M.; Wolf, R. M.; Caldwell, J. W.; Kollman, P. A.; Case, D. A. Development and Testing of a General Amber Force Field J. Comput. Chem. 2004, 25, 1157-1174
63. Maingi, V.; Jain, V.; Bharatam, P. V.; Maiti, P. K. Dendrimer Building Toolkit: Model Building and Characterization of Various Dendrimer Architectures J. Comput. Chem. 2012, 33, 1997-2011
64. Maingi, V.; Kumar, M. V. S.; Maiti, P. K. PAMAM Dendrimer-Drug Interactions: Effect of pH on the Binding and Release Pattern J. Phys. Chem. B 2012, 116, 4370-4376
65. Hockney, R. W.; Eastwood, J. W. Computer Simulation Using Particles; Institute of Physics Publishing: Bristol, 1988.
66. Andersen, H. C. Rattle-a Velocity Version of the Shake Algorithm for Molecular-Dynamics Calculations J. Comput. Phys. 1983, 52, 24-34
67. Torrie, G. M.; Valleau, J. P. Non-Physical Sampling Distributions in Monte-Carlo Free-Energy Estimation-Umbrella Sampling J. Comput. Phys. 1977, 23, 187-199
68. Needs, R. J.; Mansfield, M. Calculations of the Surface Stress Tensor and Surface-Energy of the (111) Surfaces of Iridium, Platinum and Gold J. Phys.., Condes. Matter 1989, 1, 7555-7563
69. Shim, J. H.; Lee, B. J.; Cho, Y. W. Thermal Stability of Unsupported Gold Nanoparticle: A Molecular Dynamics Study Surf. Sci. 2002, 512, 262-268
70. Leff, D. V.; Brandt, L.; Heath, J. R. Synthesis and Characterization of Hydrophobic, Organically-Soluble Gold Nanocrystals Functionalized with Primary Amines Langmuir 1996, 12, 4723-4730
71. Heinz, H.; Vaia, R. A.; Farmer, B. L.; Naik, R. R. Accurate Simulation of Surfaces and Interfaces of Face-Centered Cubic Metals Using 12-6 and 9-6 Lennard-Jones Potentials J. Phys. Chem. C 2008, 112, 17281-17290