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Volumn 140, Issue 14, 2013, Pages 2892-2903

A replication-dependent passive mechanism modulates DNA demethylation in mouse primordial germ cells

Author keywords

DNA demethylation; DNA replication; Epigenetic reprogramming; PGCs; Primordial germ cells

Indexed keywords

DNA METHYLTRANSFERASE 3A; GENOMIC DNA;

EID: 84879745846     PISSN: 09501991     EISSN: 14779129     Source Type: Journal    
DOI: 10.1242/dev.093229     Document Type: Article
Times cited : (66)

References (48)
  • 1
    • 81055149760 scopus 로고    scopus 로고
    • Loss of heterochromatin protein 1 gamma reduces the number of primordial germ cells via impaired cell cycle progression in mice
    • Abe, K., Naruse, C., Kato, T., Nishiuchi, T., Saitou, M. and Asano, M. (2011). Loss of heterochromatin protein 1 gamma reduces the number of primordial germ cells via impaired cell cycle progression in mice. Biol. Reprod. 85, 1013-1024.
    • (2011) Biol. Reprod. , vol.85 , pp. 1013-1024
    • Abe, K.1    Naruse, C.2    Kato, T.3    Nishiuchi, T.4    Saitou, M.5    Asano, M.6
  • 4
    • 0036144048 scopus 로고    scopus 로고
    • DNA methylation patterns and epigenetic memory
    • Bird, A. (2002). DNA methylation patterns and epigenetic memory. Genes Dev. 16, 6-21.
    • (2002) Genes Dev. , vol.16 , pp. 6-21
    • Bird, A.1
  • 5
    • 0042132027 scopus 로고    scopus 로고
    • Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b
    • Chen, T., Ueda, Y., Dodge, J. E., Wang, Z. and Li, E. (2003). Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b. Mol. Cell. Biol. 23, 5594-5605.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 5594-5605
    • Chen, T.1    Ueda, Y.2    Dodge, J.E.3    Wang, Z.4    Li, E.5
  • 7
    • 84873707539 scopus 로고    scopus 로고
    • Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development
    • Dawlaty, M. M., Breiling, A., Le, T., Raddatz, G., Barrasa, M. I., Cheng, A. W., Gao, Q., Powell, B. E., Li, Z., Xu, M. et al. (2013). Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development. Dev. Cell 24, 310-323.
    • (2013) Dev. Cell , vol.24 , pp. 310-323
    • Dawlaty, M.M.1    Breiling, A.2    Le, T.3    Raddatz, G.4    Barrasa, M.I.5    Cheng, A.W.6    Gao, Q.7    Powell, B.E.8    Li, Z.9    Xu, M.10
  • 10
    • 80053348585 scopus 로고    scopus 로고
    • The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
    • Gu, T. P., Guo, F., Yang, H., Wu, H. P., Xu, G. F., Liu, W., Xie, Z. G., Shi, L., He, X., Jin, S. G. et al. (2011). The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature 477, 606-610.
    • (2011) Nature , vol.477 , pp. 606-610
    • Gu, T.P.1    Guo, F.2    Yang, H.3    Wu, H.P.4    Xu, G.F.5    Liu, W.6    Xie, Z.G.7    Shi, L.8    He, X.9    Jin, S.G.10
  • 11
    • 84859519339 scopus 로고    scopus 로고
    • Global profiling of DNA methylation erasure in mouse primordial germ cells
    • Guibert, S., Forné, T. and Weber, M. (2012). Global profiling of DNA methylation erasure in mouse primordial germ cells. Genome Res. 22, 633-641.
    • (2012) Genome Res. , vol.22 , pp. 633-641
    • Guibert, S.1    Forné, T.2    Weber, M.3
  • 12
    • 79955538247 scopus 로고    scopus 로고
    • Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain
    • Guo, J. U., Su, Y., Zhong, C., Ming, G. L. and Song, H. (2011). Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain. Cell 145, 423-434.
    • (2011) Cell , vol.145 , pp. 423-434
    • Guo, J.U.1    Su, Y.2    Zhong, C.3    Ming, G.L.4    Song, H.5
  • 13
    • 84872770694 scopus 로고    scopus 로고
    • Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine
    • Hackett, J. A., Sengupta, R., Zylicz, J. J., Murakami, K., Lee, C., Down, T. A. and Surani, M. A. (2013). Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine. Science 339, 448-452.
    • (2013) Science , vol.339 , pp. 448-452
    • Hackett, J.A.1    Sengupta, R.2    Zylicz, J.J.3    Murakami, K.4    Lee, C.5    Down, T.A.6    Surani, M.A.7
  • 16
    • 77954345408 scopus 로고    scopus 로고
    • Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway
    • Hajkova, P., Jeffries, S. J., Lee, C., Miller, N., Jackson, S. P. and Surani, M. A. (2010). Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway. Science 329, 78-82.
    • (2010) Science , vol.329 , pp. 78-82
    • Hajkova, P.1    Jeffries, S.J.2    Lee, C.3    Miller, N.4    Jackson, S.P.5    Surani, M.A.6
  • 17
    • 80052022935 scopus 로고    scopus 로고
    • Reconstitution of the mouse germ cell specification pathway in culture by pluripotent stem cells
    • Hayashi, K., Ohta, H., Kurimoto, K., Aramaki, S. and Saitou, M. (2011). Reconstitution of the mouse germ cell specification pathway in culture by pluripotent stem cells. Cell 146, 519-532.
    • (2011) Cell , vol.146 , pp. 519-532
    • Hayashi, K.1    Ohta, H.2    Kurimoto, K.3    Aramaki, S.4    Saitou, M.5
  • 18
    • 80052495940 scopus 로고    scopus 로고
    • Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA
    • He, Y. F., Li, B. Z., Li, Z., Liu, P., Wang, Y., Tang, Q., Ding, J., Jia, Y., Chen, Z., Li, L. et al. (2011). Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science 333, 1303-1307.
    • (2011) Science , vol.333 , pp. 1303-1307
    • He, Y.F.1    Li, B.Z.2    Li, Z.3    Liu, P.4    Wang, Y.5    Tang, Q.6    Ding, J.7    Jia, Y.8    Chen, Z.9    Li, L.10
  • 20
    • 79952763586 scopus 로고    scopus 로고
    • Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine
    • Iqbal, K., Jin, S. G., Pfeifer, G. P. and Szabó, P. E. (2011). Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine. Proc. Natl. Acad. Sci. USA 108, 3642-3647.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 3642-3647
    • Iqbal, K.1    Jin, S.G.2    Pfeifer, G.P.3    Szabó, P.E.4
  • 21
    • 80052461558 scopus 로고    scopus 로고
    • Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
    • Ito, S., Shen, L., Dai, Q., Wu, S. C., Collins, L. B., Swenberg, J. A., He, C. and Zhang, Y. (2011). Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine. Science 333, 1300-1303.
    • (2011) Science , vol.333 , pp. 1300-1303
    • Ito, S.1    Shen, L.2    Dai, Q.3    Wu, S.C.4    Collins, L.B.5    Swenberg, J.A.6    He, C.7    Zhang, Y.8
  • 22
    • 84873570094 scopus 로고    scopus 로고
    • Replication-coupled passive DNA demethylation for the erasure of genome imprints in mice
    • Kagiwada, S., Kurimoto, K., Hirota, T., Yamaji, M. and Saitou, M. (2013). Replication-coupled passive DNA demethylation for the erasure of genome imprints in mice. EMBO J. 32, 340-353.
    • (2013) EMBO J. , vol.32 , pp. 340-353
    • Kagiwada, S.1    Kurimoto, K.2    Hirota, T.3    Yamaji, M.4    Saitou, M.5
  • 24
    • 45349107280 scopus 로고    scopus 로고
    • Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice
    • Kurimoto, K., Yabuta, Y., Ohinata, Y., Shigeta, M., Yamanaka, K. and Saitou, M. (2008). Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice. Genes Dev. 22, 1617-1635.
    • (2008) Genes Dev. , vol.22 , pp. 1617-1635
    • Kurimoto, K.1    Yabuta, Y.2    Ohinata, Y.3    Shigeta, M.4    Yamanaka, K.5    Saitou, M.6
  • 27
    • 84867021558 scopus 로고    scopus 로고
    • Implication of DNA demethylation and bivalent histone modification for selective gene regulation in mouse primordial germ cells
    • Mochizuki, K., Tachibana, M., Saitou, M., Tokitake, Y. and Matsui, Y. (2012). Implication of DNA demethylation and bivalent histone modification for selective gene regulation in mouse primordial germ cells. PLoS ONE 7, e46036.
    • (2012) PLoS ONE , vol.7
    • Mochizuki, K.1    Tachibana, M.2    Saitou, M.3    Tokitake, Y.4    Matsui, Y.5
  • 30
    • 33645227503 scopus 로고    scopus 로고
    • Generation of stella-GFP transgenic mice: A novel tool to study germ cell development
    • Payer, B., Chuva de Sousa Lopes, S. M., Barton, S. C., Lee, C., Saitou, M. and Surani, M. A. (2006). Generation of stella-GFP transgenic mice: a novel tool to study germ cell development. Genesis 44, 75-83.
    • (2006) Genesis , vol.44 , pp. 75-83
    • Payer, B.1    de Chuva Sousa Lopes, S.M.2    Barton, S.C.3    Lee, C.4    Saitou, M.5    Surani, M.A.6
  • 31
    • 15044366201 scopus 로고    scopus 로고
    • Methylation of histones: Playing memory with DNA
    • Peters, A. H. and Schübeler, D. (2005). Methylation of histones: playing memory with DNA. Curr. Opin. Cell Biol. 17, 230-238.
    • (2005) Curr. Opin. Cell Biol. , vol.17 , pp. 230-238
    • Peters, A.H.1    Schübeler, D.2
  • 32
    • 77249148019 scopus 로고    scopus 로고
    • Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
    • Popp, C., Dean, W., Feng, S., Cokus, S. J., Andrews, S., Pellegrini, M., Jacobsen, S. E. and Reik, W. (2010). Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency. Nature 463, 1101-1105.
    • (2010) Nature , vol.463 , pp. 1101-1105
    • Popp, C.1    Dean, W.2    Feng, S.3    Cokus, S.J.4    Andrews, S.5    Pellegrini, M.6    Jacobsen, S.E.7    Reik, W.8
  • 33
    • 82855176833 scopus 로고    scopus 로고
    • Epigenetic reprogramming in mouse pre-implantation development and primordial germ cells
    • Saitou, M., Kagiwada, S. and Kurimoto, K. (2012). Epigenetic reprogramming in mouse pre-implantation development and primordial germ cells. Development 139, 15-31.
    • (2012) Development , vol.139 , pp. 15-31
    • Saitou, M.1    Kagiwada, S.2    Kurimoto, K.3
  • 34
    • 38349100549 scopus 로고    scopus 로고
    • Epigenetic events in mammalian germ-cell development: Reprogramming and beyond
    • Sasaki, H. and Matsui, Y. (2008). Epigenetic events in mammalian germ-cell development: reprogramming and beyond. Nat. Rev. Genet. 9, 129-140.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 129-140
    • Sasaki, H.1    Matsui, Y.2
  • 36
    • 12944308793 scopus 로고    scopus 로고
    • Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice
    • Seki, Y., Hayashi, K., Itoh, K., Mizugaki, M., Saitou, M. and Matsui, Y. (2005). Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice. Dev. Biol. 278, 440-458.
    • (2005) Dev. Biol. , vol.278 , pp. 440-458
    • Seki, Y.1    Hayashi, K.2    Itoh, K.3    Mizugaki, M.4    Saitou, M.5    Matsui, Y.6
  • 37
    • 34447522791 scopus 로고    scopus 로고
    • Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice
    • Seki, Y., Yamaji, M., Yabuta, Y., Sano, M., Shigeta, M., Matsui, Y., Saga, Y., Tachibana, M., Shinkai, Y. and Saitou, M. (2007). Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice. Development 134, 2627-2638.
    • (2007) Development , vol.134 , pp. 2627-2638
    • Seki, Y.1    Yamaji, M.2    Yabuta, Y.3    Sano, M.4    Shigeta, M.5    Matsui, Y.6    Saga, Y.7    Tachibana, M.8    Shinkai, Y.9    Saitou, M.10
  • 39
    • 0037099413 scopus 로고    scopus 로고
    • G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis
    • Tachibana, M., Sugimoto, K., Nozaki, M., Ueda, J., Ohta, T., Ohki, M., Fukuda, M., Takeda, N., Niida, H., Kato, H. et al. (2002). G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis. Genes Dev. 16, 1779-1791.
    • (2002) Genes Dev. , vol.16 , pp. 1779-1791
    • Tachibana, M.1    Sugimoto, K.2    Nozaki, M.3    Ueda, J.4    Ohta, T.5    Ohki, M.6    Fukuda, M.7    Takeda, N.8    Niida, H.9    Kato, H.10
  • 40
    • 54349095323 scopus 로고    scopus 로고
    • G9a/GLP complexes independently mediate H3K9 and DNA methylation to silence transcription
    • Tachibana, M., Matsumura, Y., Fukuda, M., Kimura, H. and Shinkai, Y. (2008). G9a/GLP complexes independently mediate H3K9 and DNA methylation to silence transcription. EMBO J. 27, 2681-2690.
    • (2008) EMBO J. , vol.27 , pp. 2681-2690
    • Tachibana, M.1    Matsumura, Y.2    Fukuda, M.3    Kimura, H.4    Shinkai, Y.5
  • 41
    • 0019393572 scopus 로고
    • Proliferation and migration of primordial germ cells during compensatory growth in mouse embryos
    • Tam, P. P. and Snow, M. H. (1981). Proliferation and migration of primordial germ cells during compensatory growth in mouse embryos. J. Embryol. Exp. Morphol. 64, 133-147.
    • (1981) J. Embryol. Exp. Morphol. , vol.64 , pp. 133-147
    • Tam, P.P.1    Snow, M.H.2
  • 44
    • 77956095231 scopus 로고    scopus 로고
    • Active DNA demethylation: Many roads lead to Rome
    • Wu, S. C. and Zhang, Y. (2010). Active DNA demethylation: many roads lead to Rome. Nat. Rev. Mol. Cell Biol. 11, 607-620.
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , pp. 607-620
    • Wu, S.C.1    Zhang, Y.2
  • 45
    • 33750874985 scopus 로고    scopus 로고
    • Gene expression dynamics during germline specification in mice identified by quantitative single-cell gene expression profiling
    • Yabuta, Y., Kurimoto, K., Ohinata, Y., Seki, Y. and Saitou, M. (2006). Gene expression dynamics during germline specification in mice identified by quantitative single-cell gene expression profiling. Biol. Reprod. 75, 705-716.
    • (2006) Biol. Reprod. , vol.75 , pp. 705-716
    • Yabuta, Y.1    Kurimoto, K.2    Ohinata, Y.3    Seki, Y.4    Saitou, M.5
  • 48
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu, J. K. (2009). Active DNA demethylation mediated by DNA glycosylases. Annu. Rev. Genet. 43, 143-166.
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 143-166
    • Zhu, J.K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.