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Volumn 80, Issue 2, 2013, Pages 210-221

First molecular scombrid timetree (Percomorpha: Scombridae) shows recent radiation of tunas following invasion of pelagic habitat

Author keywords

fossils; molecular clock; Phylogeny; radiation; Scombridae

Indexed keywords

BODY SIZE; EVOLUTION; INVASIVE SPECIES; MITOCHONDRION; PELAGIC ECOSYSTEM; PERCIFORM; PHYLOGENY;

EID: 84879548306     PISSN: 11250003     EISSN: 17485851     Source Type: Journal    
DOI: 10.1080/11250003.2013.775366     Document Type: Article
Times cited : (36)

References (66)
  • 1
    • 0000501656 scopus 로고
    • Information theory as an extension of the maximum likelihood principle
    • In: Petrov BN, Caski F, editors Budapest, Budapest,: Akademiai Kiado, editors
    • Akaike, H. 1973. " Information theory as an extension of the maximum likelihood principle ". In Second international symposium on information theory, Edited by: Petrov, BN and Caski, F. 267 - 281. Budapest: Akademiai Kiado. editors
    • (1973) Second international symposium on information theory , pp. 267-281
    • Akaike, H.1
  • 2
    • 34548349451 scopus 로고    scopus 로고
    • Do reefs drive diversification in marine teleosts? Evidence from the pufferfishes and their allies (order Tetraodontiformes)
    • Alfaro, ME, Santini, F and Brock, CD. 2007. Do reefs drive diversification in marine teleosts? Evidence from the pufferfishes and their allies (order Tetraodontiformes). Evolution, 61: 2104 - 2126.
    • (2007) Evolution , vol.61 , pp. 2104-2126
    • Alfaro, M.E.1    Santini, F.2    Brock, C.D.3
  • 5
    • 0038336441 scopus 로고
    • Resultats scientifiques de la mission C. Arambourg en Syrie et en Iran (1938-1939). II. Les poissons Oligocène de l'Iran
    • Arambourg, C. 1967. Resultats scientifiques de la mission C. Arambourg en Syrie et en Iran (1938-1939). II. Les poissons Oligocène de l'Iran. Notes et Mémoires sur le Moyen-Orient, 8: 1 - 210.
    • (1967) Notes et Mémoires sur le Moyen-Orient , vol.8 , pp. 1-210
    • Arambourg, C.1
  • 6
    • 49249122999 scopus 로고    scopus 로고
    • Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences
    • Azuma, Y, Kumazawa, Y, Miya, M, Mabuchi, K and Nishida, M. 2008. Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences. BMC Evolutionary Biology, 8: 215
    • (2008) BMC Evolutionary Biology , vol.8 , pp. 215
    • Azuma, Y.1    Kumazawa, Y.2    Miya, M.3    Mabuchi, K.4    Nishida, M.5
  • 9
    • 0027231871 scopus 로고
    • Evolution of endothermy in fish: Mapping physiological traits on a molecular phylogeny
    • Block, BA, Stewart, AF and Kidd, J. 1993. Evolution of endothermy in fish: Mapping physiological traits on a molecular phylogeny. Science, 260: 210 - 214.
    • (1993) Science , vol.260 , pp. 210-214
    • Block, B.A.1    Stewart, A.F.2    Kidd, J.3
  • 12
    • 0342764193 scopus 로고
    • Scombroidei: Development and relationships
    • In: Moser HG, Richards WJ, Cohen DM, Fahay MP, Kendall AW, Richardson SL, editors Lawrence, KS, Lawrence, KS,: American Society for Ichthyology and Herpethology Special Publication, editors
    • Collette, BB, Potthoff, T, Richards, WJ, Ueyanagi, S, Russo, JL and Nishikawa, Y. 1984. " Scombroidei: Development and relationships ". In Ontogeny and systematics of fishes, Edited by: Moser, HG, Richards, WJ, Cohen, DM, Fahay, MP, Kendall, AW Jr and Richardson, SL. Vol. 1, 591 - 620. Lawrence, KS: American Society for Ichthyology and Herpethology Special Publication. editors
    • (1984) Ontogeny and systematics of fishes , vol.1 , pp. 591-620
    • Collette, B.B.1    Potthoff, T.2    Richards, W.J.3    Ueyanagi, S.4    Russo, J.L.5    Nishikawa, Y.6
  • 14
    • 81155145983 scopus 로고    scopus 로고
    • Coral reefs as drivers of cladogenesis: Expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots
    • Cowman, PF and Bellwood, DR. 2011. Coral reefs as drivers of cladogenesis: Expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots. Journal of Evolutionary Biology, 24: 2543 - 2562.
    • (2011) Journal of Evolutionary Biology , vol.24 , pp. 2543-2562
    • Cowman, P.F.1    Bellwood, D.R.2
  • 15
    • 2542534630 scopus 로고
    • Rapport provisoire sur sa mission d'études paléontologiques en 1937
    • Dartevelle, E. 1938. Rapport provisoire sur sa mission d'études paléontologiques en 1937. Bulletin de l'Institut Royal Colonial Belge, 9: 106 - 107.
    • (1938) Bulletin de l'Institut Royal Colonial Belge , vol.9 , pp. 106-107
    • Dartevelle, E.1
  • 18
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond, AJ and Rambaut, A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology, 7: 214
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 19
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, RC. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32: 1792 - 1797.
    • (2004) Nucleic Acids Research , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 21
    • 65249132408 scopus 로고    scopus 로고
    • Ecomorphological selectivity among marine teleost fishes during the end-Cretaceous extinction
    • Friedman, M. 2009. Ecomorphological selectivity among marine teleost fishes during the end-Cretaceous extinction. Proceedings of the National Academy of Sciences, 106: 5218 - 5223.
    • (2009) Proceedings of the National Academy of Sciences , vol.106 , pp. 5218-5223
    • Friedman, M.1
  • 22
    • 77953515051 scopus 로고    scopus 로고
    • Explosive morphological diversification of spiny-finned teleost fishes in the aftermath of the end-Cretaceous extinction
    • Friedman, M. 2010. Explosive morphological diversification of spiny-finned teleost fishes in the aftermath of the end-Cretaceous extinction. Proceedings of the Royal Society B, 277: 1675 - 1683.
    • (2010) Proceedings of the Royal Society B , vol.277 , pp. 1675-1683
    • Friedman, M.1
  • 23
    • 67651028798 scopus 로고    scopus 로고
    • Kiel, Kiel,: Christian Albrecht Universitat zu Kiel Leibniz Institut fur Meereswissenschaften
    • Froese, R. 2005. Life-history strategies of recent fishes: A meta-analysis, Kiel: Christian Albrecht Universitat zu Kiel Leibniz Institut fur Meereswissenschaften.
    • (2005) Life-history strategies of recent fishes: A meta-analysis
    • Froese, R.1
  • 24
    • 0004048250 scopus 로고    scopus 로고
    • World Wide Web electronic publication. Available:Accessed Dec 28, 2012
    • Froese R, Pauly D. 2012. FishBase. World Wide Web electronic publication. Available:Accessed Dec 28, 2012. http://www.fishbase.org
    • (2012) FishBase
    • Froese, R.1    Pauly, D.2
  • 27
    • 84861456814 scopus 로고    scopus 로고
    • Palynological reconstruction of the Eocene marine palaeoenvironments in south of Western Siberia
    • Iakovleva, AI. 2011. Palynological reconstruction of the Eocene marine palaeoenvironments in south of Western Siberia. Acta Palaeobotanica, 51: 229 - 248.
    • (2011) Acta Palaeobotanica , vol.51 , pp. 229-248
    • Iakovleva, A.I.1
  • 29
    • 0001818737 scopus 로고
    • Scombroid phylogeny: An alternative hypothesis
    • Johnson, GD. 1986. Scombroid phylogeny: An alternative hypothesis. Bulletin of Marine Science, 39: 1 - 41.
    • (1986) Bulletin of Marine Science , vol.39 , pp. 1-41
    • Johnson, G.D.1
  • 30
    • 0002329445 scopus 로고
    • The stratigraphy of the London Clay and associated deposits
    • Volume
    • King, C. 1981. The stratigraphy of the London Clay and associated deposits. Tertiary Research Special, 6: 3 - 158. Volume
    • (1981) Tertiary Research Special , vol.6 , pp. 3-158
    • King, C.1
  • 31
    • 0001463749 scopus 로고
    • The stratigraphy of the London Clay Formation and Virginia Water Formation in the coastal sections of the Isle of Sheppey (Kent, England)
    • King, C. 1984. The stratigraphy of the London Clay Formation and Virginia Water Formation in the coastal sections of the Isle of Sheppey (Kent, England). Tertiary Research, 5: 121 - 160.
    • (1984) Tertiary Research , vol.5 , pp. 121-160
    • King, C.1
  • 33
    • 77954424732 scopus 로고    scopus 로고
    • Evolutionary affinity of billfishes Xiphiidae and Istiophoridae and flatfishes Pleuronectiformes, independent and trans-subordinal origins of endothermy in teleost fishes
    • Little, AG, Lougheed, SC and Moyes, CD. 2010. Evolutionary affinity of billfishes Xiphiidae and Istiophoridae and flatfishes Pleuronectiformes, independent and trans-subordinal origins of endothermy in teleost fishes. Molecular Phylogenetics and Evolution, 56: 897 - 904.
    • (2010) Molecular Phylogenetics and Evolution , vol.56 , pp. 897-904
    • Little, A.G.1    Lougheed, S.C.2    Moyes, C.D.3
  • 36
    • 79955156793 scopus 로고    scopus 로고
    • On the origin and trigger of the Notothenioid adaptive radiation
    • e18911, doi: doi:10.1371/journal.pone.0018911
    • Matschiner, M, Hanel, R and Salzburger, W. 2011. On the origin and trigger of the Notothenioid adaptive radiation. PLoS ONE, 6 e18911, doi: doi:10.1371/journal.pone.0018911
    • (2011) PLoS ONE , vol.6
    • Matschiner, M.1    Hanel, R.2    Salzburger, W.3
  • 37
    • 0010055191 scopus 로고
    • Review of the mackerel genera Scomber and Rastrelliger with description of a new species of Rastrelliger
    • Matsui, T. 1967. Review of the mackerel genera Scomber and Rastrelliger with description of a new species of Rastrelliger. Copeia, 1967: 71 - 83.
    • (1967) Copeia , vol.1967 , pp. 71-83
    • Matsui, T.1
  • 38
    • 0034078216 scopus 로고    scopus 로고
    • A new fossil bonito (Sardini, Teleostei) from the Eocene of England and the Caucasus, and evolution of tail region characters of its Recent relatives
    • Monsch, KA. 2000. A new fossil bonito (Sardini, Teleostei) from the Eocene of England and the Caucasus, and evolution of tail region characters of its Recent relatives. Paleontological Research, 4: 75 - 80.
    • (2000) Paleontological Research , vol.4 , pp. 75-80
    • Monsch, K.A.1
  • 40
    • 33745863840 scopus 로고    scopus 로고
    • A revision of scombrid fishes (Scombroidei, Perciformes) from the middle Eocene of Monte Bolca, Italy
    • Monsch, KA. 2006. A revision of scombrid fishes (Scombroidei, Perciformes) from the middle Eocene of Monte Bolca, Italy. Palaeontology, 49: 873 - 888.
    • (2006) Palaeontology , vol.49 , pp. 873-888
    • Monsch, K.A.1
  • 43
    • 0002341457 scopus 로고    scopus 로고
    • Cretaceous fish otoliths - A synthesis of the North American record
    • In: Arratia G, Viohl G, editors München, München,: Verlag Dr. Friedrich Pfeil, editors
    • Nolf, D and Stringer, GL. 1996. " Cretaceous fish otoliths - A synthesis of the North American record ". In Mesozoic fishes - Systematics and paleoecology, Edited by: Arratia, G and Viohl, G. 433 - 459. München: Verlag Dr. Friedrich Pfeil. editors
    • (1996) Mesozoic fishes - Systematics and paleoecology , pp. 433-459
    • Nolf, D.1    Stringer, G.L.2
  • 44
    • 33846507155 scopus 로고    scopus 로고
    • Molecular data support separate clades for Scombroidei (tunas and relatives) and Xiphioidei (billfishes)
    • Orrell, TM, Collette, BB and Johnson, GD. 2006. Molecular data support separate clades for Scombroidei (tunas and relatives) and Xiphioidei (billfishes). Bulletin of Marine Science, 79: 505 - 519.
    • (2006) Bulletin of Marine Science , vol.79 , pp. 505-519
    • Orrell, T.M.1    Collette, B.B.2    Johnson, G.D.3
  • 45
    • 1042304216 scopus 로고    scopus 로고
    • APE: Analyses of phylogenetics and evolution in R language
    • Paradis, E, Claude, J and Strimmer, K. 2004. APE: Analyses of phylogenetics and evolution in R language. Bioinformatics, 20: 289 - 290.
    • (2004) Bioinformatics , vol.20 , pp. 289-290
    • Paradis, E.1    Claude, J.2    Strimmer, K.3
  • 46
    • 0001023769 scopus 로고
    • Osteichthyes: Teleostei
    • In: Benton MJ, editors London, London,: Chapman & Hall, editor
    • Patterson, C. 1993. " Osteichthyes: Teleostei ". In The fossil record 2, Edited by: Benton, MJ. 621 - 656. London: Chapman & Hall. editor
    • (1993) The fossil record 2 , pp. 621-656
    • Patterson, C.1
  • 47
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: Phylogenetic model averaging
    • Posada, D. 2008. JModelTest: Phylogenetic model averaging. Molecular Biology and Evolution, 25: 1253 - 1256.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 48
    • 0002562681 scopus 로고
    • Cretaceous planktonic foraminiferal biostratigraphy and evolutionary trends from the Bottaccione section, Gubbio, Italy
    • Premoli Silva, I and Sliter, WW. 1994. Cretaceous planktonic foraminiferal biostratigraphy and evolutionary trends from the Bottaccione section, Gubbio, Italy. Palaeontographia Italica, 82: 1 - 89.
    • (1994) Palaeontographia Italica , vol.82 , pp. 1-89
    • Premoli Silva, I.1    Sliter, W.W.2
  • 49
    • 0034703844 scopus 로고    scopus 로고
    • Testing macro-evolutionary models using incomplete molecular phylogenies
    • Pybus, OG and Harvey, PH. 2000. Testing macro-evolutionary models using incomplete molecular phylogenies. Proceedings of the Royal Society of London B, 267: 2267 - 2272.
    • (2000) Proceedings of the Royal Society of London B , vol.267 , pp. 2267-2272
    • Pybus, O.G.1    Harvey, P.H.2
  • 50
    • 85129154611 scopus 로고    scopus 로고
    • LASER: a maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies
    • Rabosky, DL. 2006. LASER: a maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies. Evolutionary Bioinformatics, 2: 257 - 260.
    • (2006) Evolutionary Bioinformatics , vol.2 , pp. 257-260
    • Rabosky, D.L.1
  • 52
    • 58149333404 scopus 로고    scopus 로고
    • Diversity dynamics of marine planktonic diatoms across the Cenozoic
    • Rabosky, DL and Sorhannus, U. 2009. Diversity dynamics of marine planktonic diatoms across the Cenozoic. Nature, 457: 183 - 186.
    • (2009) Nature , vol.457 , pp. 183-186
    • Rabosky, D.L.1    Sorhannus, U.2
  • 53
    • 84871430743 scopus 로고    scopus 로고
    • Early Paleocene transgressions: Stratigraphical and sedimentological evidence from northern Peri-Tethys
    • In: Wing SL, Gingerich PD, Schmitz B, Thomas E, editors. Causes and consequences of globally warm climates in the early Paleogene
    • Radionova, EP, Beniamoski, VN, Iakovleva, AI, Muzylov, NG, Oreshkina, TV, Shcherbinina, EA and Kozlova, GE. 2003. Early Paleocene transgressions: Stratigraphical and sedimentological evidence from northern Peri-Tethys. In: Wing SL, Gingerich PD, Schmitz B, Thomas E, editors. Causes and consequences of globally warm climates in the early Paleogene. Geological Society of America Special Papers, 369: 239 - 261.
    • (2003) Geological Society of America Special Papers , vol.369 , pp. 239-261
    • Radionova, E.P.1    Beniamoski, V.N.2    Iakovleva, A.I.3    Muzylov, N.G.4    Oreshkina, T.V.5    Shcherbinina, E.A.6    Kozlova, G.E.7
  • 54
    • 84879514247 scopus 로고    scopus 로고
    • Tracer v1.5. Available:Accessed Sep 20, 2012
    • Rambaut A, Drummond AJ. 2009. Tracer v1.5. Available:Accessed Sep 20, 2012. http://beast.bio.ed.ac.uk/Tracer
    • (2009)
    • Rambaut, A.1    Drummond, A.J.2
  • 55
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team. Vienna, Austria. Available:Accessed Sep 20, 2012
    • R Development Core Team. 2012. R: A language and environment for statistical computing. Vienna, Austria. Available:Accessed Sep 20, 2012. http://www.R-project.org
    • (2012) R: A language and environment for statistical computing
  • 56
    • 33748155998 scopus 로고    scopus 로고
    • Planktonic foraminifera - Upper Cretaceous, chart of Cretaceous biochronostratigraphy
    • In: de Graciansky PC, Hardenbol J, Vail PR, editors SEPM Special Publication, editors
    • Robaszynski, F. 1998. " Planktonic foraminifera - Upper Cretaceous, chart of Cretaceous biochronostratigraphy ". In Mesozoic and Cenozoic sequence stratigraphy of European basins, Edited by: de Graciansky, PC, Hardenbol, J and Vail, PR. Vol. 60, 782 SEPM Special Publication. editors
    • (1998) Mesozoic and Cenozoic sequence stratigraphy of European basins , vol.60 , pp. 782
    • Robaszynski, F.1
  • 58
    • 45849099814 scopus 로고    scopus 로고
    • The PhyLoTA Browser: processing GenBank for molecular phylogenetics research
    • Sanderson, MJ, Boss, D, Chen, D, Cranston, KA and Wehe, A. 2008. The PhyLoTA Browser: processing GenBank for molecular phylogenetics research. Systematic Biology, 57: 335 - 346.
    • (2008) Systematic Biology , vol.57 , pp. 335-346
    • Sanderson, M.J.1    Boss, D.2    Chen, D.3    Cranston, K.A.4    Wehe, A.5
  • 59
    • 70349201094 scopus 로고    scopus 로고
    • Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes
    • Santini, F, Harmon, LJ, Carnevale, G and Alfaro, ME. 2009. Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes. BMC Evolutionary Biology, 9: 164 - 178.
    • (2009) BMC Evolutionary Biology , vol.9 , pp. 164-178
    • Santini, F.1    Harmon, L.J.2    Carnevale, G.3    Alfaro, M.E.4
  • 61
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis, A. 2006. RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22: 2688 - 2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 62
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K, Peterson, D, Peterson, N, Stecher, G, Nei, M and Kumar, S. 2011. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Biology and Evolution, 28: 2731 - 2739.
    • (2011) Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 63
    • 21044440813 scopus 로고
    • Scomberomorus chichibu, a new Miocene scombrid fish from Japan (Pisces, Perciformes)
    • Uyeno, T, Sajamoto, K and Sakamoto, O. 1994. Scomberomorus chichibu, a new Miocene scombrid fish from Japan (Pisces, Perciformes). Bulletin of the National Science Museum Tokyo C, 20: 149 - 155.
    • (1994) Bulletin of the National Science Museum Tokyo C , vol.20 , pp. 149-155
    • Uyeno, T.1    Sajamoto, K.2    Sakamoto, O.3
  • 64
    • 84865281081 scopus 로고    scopus 로고
    • The evolution of pharyngognathy: A phylogenetic and functional appraisal of the pharyngeal jaw key innovation in labroid fishes and beyond
    • Wainwright, PCW, Smith, L, Price, SA, Tang, KL, Sparks, JS, Ferry, LA, Kuhn, KL, Eytan, RI and Near, TJ. 2012. The evolution of pharyngognathy: A phylogenetic and functional appraisal of the pharyngeal jaw key innovation in labroid fishes and beyond. Systematic Biology, 61: 1001 - 1027.
    • (2012) Systematic Biology , vol.61 , pp. 1001-1027
    • Wainwright, P.C.W.1    Smith, L.2    Price, S.A.3    Tang, K.L.4    Sparks, J.S.5    Ferry, L.A.6    Kuhn, K.L.7    Eytan, R.I.8    Near, T.J.9


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