메뉴 건너뛰기




Volumn 8, Issue 6, 2013, Pages

Application of the ITS2 Region for Barcoding Medicinal Plants of Selaginellaceae in Pteridophyta

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER 2; PLANT DNA;

EID: 84879530450     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0067818     Document Type: Article
Times cited : (90)

References (46)
  • 1
    • 79956309501 scopus 로고    scopus 로고
    • The Selaginella genome identifies genetic changes associated with the evolution of vascular plants
    • Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, et al. (2011) The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science 332: 960-963.
    • (2011) Science , vol.332 , pp. 960-963
    • Banks, J.A.1    Nishiyama, T.2    Hasebe, M.3    Bowman, J.L.4    Gribskov, M.5
  • 2
    • 84869760052 scopus 로고    scopus 로고
    • Bioactive selaginellins from Selaginella tamariscina (Beauv.) Spring
    • Yang C, Shao YT, Li K, Xia WJ, (2012) Bioactive selaginellins from Selaginella tamariscina (Beauv.) Spring. Beilstein J Org Chem 8: 1884-1889.
    • (2012) Beilstein J Org Chem , vol.8 , pp. 1884-1889
    • Yang, C.1    Shao, Y.T.2    Li, K.3    Xia, W.J.4
  • 3
    • 84871685317 scopus 로고    scopus 로고
    • Nonseed plant Selaginella moellendorffi has both seed plant and microbial types of terpene synthases
    • Li GL, Köllner TG, Yin YB, Jiang YF, Chen H, et al. (2012) Nonseed plant Selaginella moellendorffi has both seed plant and microbial types of terpene synthases. Proc Natl Acad Sci USA 109: 14711-14715.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 14711-14715
    • Li, G.L.1    Köllner, T.G.2    Yin, Y.B.3    Jiang, Y.F.4    Chen, H.5
  • 4
    • 84871983600 scopus 로고    scopus 로고
    • Comparative metabolic profiling between desiccation-sensitive and desiccation-tolerant species of Selaginella reveals insights into the resurrection trait
    • Yobi A, Wone BW, Xu W, Alexander DC, Guo L, et al. (2012) Comparative metabolic profiling between desiccation-sensitive and desiccation-tolerant species of Selaginella reveals insights into the resurrection trait. Plant J 72: 983-999.
    • (2012) Plant J , vol.72 , pp. 983-999
    • Yobi, A.1    Wone, B.W.2    Xu, W.3    Alexander, D.C.4    Guo, L.5
  • 5
    • 84862787795 scopus 로고    scopus 로고
    • Isolation and cytotoxic activity of selaginellin derivatives and biflavonoids from Selaginella tamariscina
    • Zhang GG, Jing Y, Zhang HM, Ma EL, Guan J, et al. (2012) Isolation and cytotoxic activity of selaginellin derivatives and biflavonoids from Selaginella tamariscina. Planta Med 78: 390-392.
    • (2012) Planta Med , vol.78 , pp. 390-392
    • Zhang, G.G.1    Jing, Y.2    Zhang, H.M.3    Ma, E.L.4    Guan, J.5
  • 6
    • 80053616501 scopus 로고    scopus 로고
    • In vitro and in vivo evaluation of the anticarcinogenic and cancer chemopreventive potential of a flavonoid-rich fraction from a traditional Indian herb Selaginella bryopteris
    • Mishra PK, Raghuram GV, Bhargava A, Ahirwar A, Samarth R, et al. (2011) In vitro and in vivo evaluation of the anticarcinogenic and cancer chemopreventive potential of a flavonoid-rich fraction from a traditional Indian herb Selaginella bryopteris. Br J Nutr 106: 1154-1168.
    • (2011) Br J Nutr , vol.106 , pp. 1154-1168
    • Mishra, P.K.1    Raghuram, G.V.2    Bhargava, A.3    Ahirwar, A.4    Samarth, R.5
  • 7
    • 77950299616 scopus 로고    scopus 로고
    • Antimicrobial selaginellin derivatives from Selaginella pulvinata
    • Cao Y, Chen JJ, Tan NH, Oberer L, Wagner T, et al. (2010) Antimicrobial selaginellin derivatives from Selaginella pulvinata. Bioorg Med Chem Lett 20: 2456-2460.
    • (2010) Bioorg Med Chem Lett , vol.20 , pp. 2456-2460
    • Cao, Y.1    Chen, J.J.2    Tan, N.H.3    Oberer, L.4    Wagner, T.5
  • 8
    • 78651395097 scopus 로고    scopus 로고
    • Antihyperglycemic activity of Selaginella tamariscina (Beauv.) Spring
    • Zheng XK, Li YJ, Zhang L, Feng WS, Zhang X, (2011) Antihyperglycemic activity of Selaginella tamariscina (Beauv.) Spring. J Ethnopharmacol 133: 531-537.
    • (2011) J Ethnopharmacol , vol.133 , pp. 531-537
    • Zheng, X.K.1    Li, Y.J.2    Zhang, L.3    Feng, W.S.4    Zhang, X.5
  • 9
    • 79955799203 scopus 로고    scopus 로고
    • Protection of immunocompromised mice from fungal infection with a thymus growth-stimulatory component from Selaginella involvens, a fern
    • Gayathri V, Asha VV, John JA, Subramoniam A, (2011) Protection of immunocompromised mice from fungal infection with a thymus growth-stimulatory component from Selaginella involvens, a fern. Immunopharmacol Immunotoxicol 33: 351-359.
    • (2011) Immunopharmacol Immunotoxicol , vol.33 , pp. 351-359
    • Gayathri, V.1    Asha, V.V.2    John, J.A.3    Subramoniam, A.4
  • 10
    • 77950626542 scopus 로고    scopus 로고
    • Bioactive flavones and biflavones from Selaginella moellendorffii Hieron
    • Cao Y, Tan NH, Chen JJ, Zeng GZ, Ma YB, et al. (2010) Bioactive flavones and biflavones from Selaginella moellendorffii Hieron. Fitoterapia 81: 253-258.
    • (2010) Fitoterapia , vol.81 , pp. 253-258
    • Cao, Y.1    Tan, N.H.2    Chen, J.J.3    Zeng, G.Z.4    Ma, Y.B.5
  • 11
    • 79959718707 scopus 로고    scopus 로고
    • Structural characterization and identification of biflavones in Selaginella tamariscina by liquid chromatography-diode-array detection/electrospray ionization tandem mass spectrometry
    • Zhang YX, Li QY, Yan LL, Shi Y, (2011) Structural characterization and identification of biflavones in Selaginella tamariscina by liquid chromatography-diode-array detection/electrospray ionization tandem mass spectrometry. Rapid Commun Mass Spectrom 25: 2173-2186.
    • (2011) Rapid Commun Mass Spectrom , vol.25 , pp. 2173-2186
    • Zhang, Y.X.1    Li, Q.Y.2    Yan, L.L.3    Shi, Y.4
  • 12
    • 67650216171 scopus 로고    scopus 로고
    • Pyrrolidinoindoline alkaloids from Selaginella moellendorfii
    • Wang YH, Long CL, Yang FM, Wang X, Sun QY, et al. (2009) Pyrrolidinoindoline alkaloids from Selaginella moellendorfii. J Nat Prod 72: 1151-1154.
    • (2009) J Nat Prod , vol.72 , pp. 1151-1154
    • Wang, Y.H.1    Long, C.L.2    Yang, F.M.3    Wang, X.4    Sun, Q.Y.5
  • 13
    • 67651011899 scopus 로고    scopus 로고
    • Selaginella and 400 million years of separation
    • Banks JA, (2009) Selaginella and 400 million years of separation. Annu Rev Plant Biol 60: 223-238.
    • (2009) Annu Rev Plant Biol , vol.60 , pp. 223-238
    • Banks, J.A.1
  • 14
    • 0042531561 scopus 로고    scopus 로고
    • Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species
    • Hebert PDN, Ratnasingham S, deWaard JR, (2003) Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc Biol Sci 270: S96-S99.
    • (2003) Proc Biol Sci , vol.270
    • Hebert, P.D.N.1    Ratnasingham, S.2    deWaard, J.R.3
  • 16
    • 69149084832 scopus 로고    scopus 로고
    • A DNA barcode for land plants
    • CBOL Plant Working Group
    • CBOL Plant Working Group (2009) A DNA barcode for land plants. Proc Natl Acad Sci USA 106: 12794-12797.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 12794-12797
  • 17
    • 83755207349 scopus 로고    scopus 로고
    • Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants
    • Li DZ, Gao LM, Li HT, Wang H, Ge XJ, et al. (2011) Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants. Proc Natl Acad Sci USA 108: 19641-19646.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 19641-19646
    • Li, D.Z.1    Gao, L.M.2    Li, H.T.3    Wang, H.4    Ge, X.J.5
  • 18
    • 83755173031 scopus 로고    scopus 로고
    • Refining the DNA barcode for land plants
    • Hollingsworth PM, (2011) Refining the DNA barcode for land plants. Proc Natl Acad Sci USA 108: 19451-19452.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 19451-19452
    • Hollingsworth, P.M.1
  • 19
    • 84860420671 scopus 로고    scopus 로고
    • Testing the potential of proposed DNA barcodes for species identification of Zingiberaceae
    • Shi LC, Zhang J, Han JP, Song JY, Yao H, et al. (2011) Testing the potential of proposed DNA barcodes for species identification of Zingiberaceae. Journal of Systematics and Evolution 49: 261-266.
    • (2011) Journal of Systematics and Evolution , vol.49 , pp. 261-266
    • Shi, L.C.1    Zhang, J.2    Han, J.P.3    Song, J.Y.4    Yao, H.5
  • 20
    • 77649108109 scopus 로고    scopus 로고
    • Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species
    • Chen SL, Yao H, Han JP, Liu C, Song JY, et al. (2010) Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species. PLoS One 5: e8613.
    • (2010) PLoS One , vol.5
    • Chen, S.L.1    Yao, H.2    Han, J.P.3    Liu, C.4    Song, J.Y.5
  • 21
    • 67650676738 scopus 로고    scopus 로고
    • Authentication of the family Polygonaceae in Chinese pharmacopoeia by DNA barcoding technique
    • Song JY, Yao H, Li Y, Li XW, Lin YL, et al. (2009) Authentication of the family Polygonaceae in Chinese pharmacopoeia by DNA barcoding technique. J Ethnopharmacol 124: 434-439.
    • (2009) J Ethnopharmacol , vol.124 , pp. 434-439
    • Song, J.Y.1    Yao, H.2    Li, Y.3    Li, X.W.4    Lin, Y.L.5
  • 23
    • 78651238811 scopus 로고    scopus 로고
    • Target-guided isolation and purification of antioxidants from Selaginella sinensis by offline coupling of DPPH-HPLC and HSCCC experiments
    • Zhang Y, Shi S, Wang Y, Huang K, (2011) Target-guided isolation and purification of antioxidants from Selaginella sinensis by offline coupling of DPPH-HPLC and HSCCC experiments. J Chromatogr B Analyt Technol Biomed Life Sci 879: 191-196.
    • (2011) J Chromatogr B Analyt Technol Biomed Life Sci , vol.879 , pp. 191-196
    • Zhang, Y.1    Shi, S.2    Wang, Y.3    Huang, K.4
  • 24
    • 78049313200 scopus 로고    scopus 로고
    • Use of ITS2 region as the universal DNA barcode for plants and animals
    • Yao H, Song JY, Liu C, Luo K, Han JP, et al. (2010) Use of ITS2 region as the universal DNA barcode for plants and animals. PLoS One 5: e13102.
    • (2010) PLoS One , vol.5
    • Yao, H.1    Song, J.Y.2    Liu, C.3    Luo, K.4    Han, J.P.5
  • 25
  • 26
    • 84859841345 scopus 로고    scopus 로고
    • ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies
    • Koetschan C, Hackl T, Müller T, Wolf M, Förster F, et al. (2012) ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies. Mol Phylogenet Evol 63: 585-588.
    • (2012) Mol Phylogenet Evol , vol.63 , pp. 585-588
    • Koetschan, C.1    Hackl, T.2    Müller, T.3    Wolf, M.4    Förster, F.5
  • 27
    • 77953810183 scopus 로고    scopus 로고
    • Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS2
    • Gao T, Yao H, Song JY, Liu C, Zhu YJ, et al. (2010) Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS2. J Ethnopharmacol 130: 116-121.
    • (2010) J Ethnopharmacol , vol.130 , pp. 116-121
    • Gao, T.1    Yao, H.2    Song, J.Y.3    Liu, C.4    Zhu, Y.J.5
  • 28
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 29
    • 77953809861 scopus 로고    scopus 로고
    • Using DNA barcoding to identify species within Euphorbiaceae
    • Pang XH, Song JY, Zhu YJ, Xie CX, Chen SL, (2010) Using DNA barcoding to identify species within Euphorbiaceae. Planta Med 76: 1784-1786.
    • (2010) Planta Med , vol.76 , pp. 1784-1786
    • Pang, X.H.1    Song, J.Y.2    Zhu, Y.J.3    Xie, C.X.4    Chen, S.L.5
  • 30
    • 70849112619 scopus 로고    scopus 로고
    • Unparalleled GC content in the plastid DNA of Selaginella
    • Smith DR, (2009) Unparalleled GC content in the plastid DNA of Selaginella. Plant Mol Biol 71: 627-639.
    • (2009) Plant Mol Biol , vol.71 , pp. 627-639
    • Smith, D.R.1
  • 31
    • 80054787378 scopus 로고    scopus 로고
    • rbcL and matK earn two thumbs up as the core DNA barcode for ferns
    • Li FW, Kuo LY, Rothfels CJ, Ebihara A, Chiou WL, et al. (2011) rbcL and matK earn two thumbs up as the core DNA barcode for ferns. PLoS ONE 6: e26597.
    • (2011) PLoS ONE , vol.6
    • Li, F.W.1    Kuo, L.Y.2    Rothfels, C.J.3    Ebihara, A.4    Chiou, W.L.5
  • 32
    • 78650114014 scopus 로고    scopus 로고
    • Molecular species identification with rich floristic sampling: DNA barcoding the pteridophyte flora of Japan
    • Ebihara A, Nitta JH, Ito M, (2010) Molecular species identification with rich floristic sampling: DNA barcoding the pteridophyte flora of Japan. PLoS ONE 5: e15136.
    • (2010) PLoS ONE , vol.5
    • Ebihara, A.1    Nitta, J.H.2    Ito, M.3
  • 33
    • 78249257262 scopus 로고    scopus 로고
    • Species identification of medicinal pteridophytes by a DNA barcode marker, the chloroplast psbA-trnH intergenic region
    • Ma XY, Xie CX, Liu C, Song JY, Yao H, et al. (2010) Species identification of medicinal pteridophytes by a DNA barcode marker, the chloroplast psbA-trnH intergenic region. Biol Pharm Bull 33: 1919-1924.
    • (2010) Biol Pharm Bull , vol.33 , pp. 1919-1924
    • Ma, X.Y.1    Xie, C.X.2    Liu, C.3    Song, J.Y.4    Yao, H.5
  • 35
    • 80053328730 scopus 로고    scopus 로고
    • How many loci does it take to DNA barcode a Crocus?
    • Seberg O, Petersen G, (2009) How many loci does it take to DNA barcode a Crocus?. PLoS ONE 4: e4598.
    • (2009) PLoS ONE , vol.4
    • Seberg, O.1    Petersen, G.2
  • 36
    • 65349160947 scopus 로고    scopus 로고
    • Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae)
    • Julian RS, Robert FCN, Brianna NC, (2009) Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae). Molecular Ecology Resources 9: 151-163.
    • (2009) Molecular Ecology Resources , vol.9 , pp. 151-163
    • Julian, R.S.1    Robert, F.C.N.2    Brianna, N.C.3
  • 37
    • 84867744921 scopus 로고    scopus 로고
    • DNA secondary structures: stability and function of G-quadruplex structures
    • Bochman ML, Paeschke K, Zakian VA, (2012) DNA secondary structures: stability and function of G-quadruplex structures. Nat Rev Genet 13: 770-780.
    • (2012) Nat Rev Genet , vol.13 , pp. 770-780
    • Bochman, M.L.1    Paeschke, K.2    Zakian, V.A.3
  • 38
    • 84866177708 scopus 로고    scopus 로고
    • Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia
    • Salvi D, Mariottini P, (2012) Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia. Mol Phylogenet Evol 65: 792-798.
    • (2012) Mol Phylogenet Evol , vol.65 , pp. 792-798
    • Salvi, D.1    Mariottini, P.2
  • 40
    • 84865593212 scopus 로고    scopus 로고
    • Extensive pyrosequencing reveals frequent intra-genomic variations of internal transcribed spacer regions of nuclear ribosomal DNA
    • Song JY, Shi LC, Li D, Sun YZ, Niu YY, et al. (2012) Extensive pyrosequencing reveals frequent intra-genomic variations of internal transcribed spacer regions of nuclear ribosomal DNA. PLoS One 7: e43971.
    • (2012) PLoS One , vol.7
    • Song, J.Y.1    Shi, L.C.2    Li, D.3    Sun, Y.Z.4    Niu, Y.Y.5
  • 41
    • 84879548118 scopus 로고    scopus 로고
    • Selaginella moellendorffii telomeres: conserved and unique features in an ancient land plant lineage
    • Shakirov EV, Shippen DE, (2012) Selaginella moellendorffii telomeres: conserved and unique features in an ancient land plant lineage. Front Plant Sci 3: 161.
    • (2012) Front Plant Sci , vol.3 , pp. 161
    • Shakirov, E.V.1    Shippen, D.E.2
  • 42
    • 16644366883 scopus 로고    scopus 로고
    • Variation in chromosome numbers, CMA bands and 45S rDNA sites in species of Selaginella (Pteridophyta)
    • Marcon AB, Barros IC, Guerra M, (2005) Variation in chromosome numbers, CMA bands and 45S rDNA sites in species of Selaginella (Pteridophyta). Ann Bot 95: 271-276.
    • (2005) Ann Bot , vol.95 , pp. 271-276
    • Marcon, A.B.1    Barros, I.C.2    Guerra, M.3
  • 43
    • 84866256563 scopus 로고    scopus 로고
    • DNA barcoding of authentic and substitute samples of herb of the family Asparagaceae and Asclepiadaceae based on the ITS2 region
    • Rai PS, Bellampalli R, Dobriyal RM, Agarwal A, Satyamoorthy K, et al. (2012) DNA barcoding of authentic and substitute samples of herb of the family Asparagaceae and Asclepiadaceae based on the ITS2 region. J Ayurveda Integr Med 3: 136-140.
    • (2012) J Ayurveda Integr Med , vol.3 , pp. 136-140
    • Rai, P.S.1    Bellampalli, R.2    Dobriyal, R.M.3    Agarwal, A.4    Satyamoorthy, K.5
  • 44
    • 79960713932 scopus 로고    scopus 로고
    • PTIGS-IdIt, a system for species identification by DNA sequences of the psbA-trnH intergenic spacer region
    • Liu C, Liang D, Gao T, Pang XH, Song JY, et al. (2011) PTIGS-IdIt, a system for species identification by DNA sequences of the psbA-trnH intergenic spacer region. BMC Bioinformatics 12: S4.
    • (2011) BMC Bioinformatics , vol.12
    • Liu, C.1    Liang, D.2    Gao, T.3    Pang, X.H.4    Song, J.Y.5
  • 45
    • 2442585571 scopus 로고    scopus 로고
    • The phylogenetic history of Selaginellaceae based on DNA sequences from the plastid and nucleus: extreme substitution rates and rate heterogeneity
    • Korall P, Kenrick P, (2004) The phylogenetic history of Selaginellaceae based on DNA sequences from the plastid and nucleus: extreme substitution rates and rate heterogeneity. Mol Phylogenet Evol 31: 852-864.
    • (2004) Mol Phylogenet Evol , vol.31 , pp. 852-864
    • Korall, P.1    Kenrick, P.2
  • 46
    • 0036202558 scopus 로고    scopus 로고
    • Phylogenetic relationships in Selaginellaceae based on rbcL sequences
    • Korall P, Kenrick P, (2002) Phylogenetic relationships in Selaginellaceae based on rbcL sequences. Am J Bot 89: 506-517.
    • (2002) Am J Bot , vol.89 , pp. 506-517
    • Korall, P.1    Kenrick, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.