메뉴 건너뛰기




Volumn 195, Issue 7, 2013, Pages 507-512

Diversity of Archaea in Brazilian savanna soils

Author keywords

16S rRNA gene; Archaea; Brazilian savanna; Cerrado; Molecular phylogeny; Soil

Indexed keywords

RNA 16S;

EID: 84879409504     PISSN: 03028933     EISSN: 1432072X     Source Type: Journal    
DOI: 10.1007/s00203-013-0882-x     Document Type: Article
Times cited : (19)

References (33)
  • 1
    • 45149092121 scopus 로고    scopus 로고
    • Are Archaea inherently less diverse than Bacteria in the same environments?
    • 18479447 10.1111/j.1574-6941.2008.00498.x 1:CAS:528:DC%2BD1cXotlKgtL0%3D
    • Aller JY, Kemp PF (2008) Are Archaea inherently less diverse than Bacteria in the same environments? FEMS Microbiol Ecol 65(1):74-87
    • (2008) FEMS Microbiol Ecol , vol.65 , Issue.1 , pp. 74-87
    • Aller, J.Y.1    Kemp, P.F.2
  • 3
    • 76349125984 scopus 로고    scopus 로고
    • Global ecological patterns in uncultured Archaea
    • 19847207 10.1038/ismej.2009.109
    • Auguet JC, Barberan A, Casamayor EO (2010) Global ecological patterns in uncultured Archaea. ISME J 4(2):182-190
    • (2010) ISME J , vol.4 , Issue.2 , pp. 182-190
    • Auguet, J.C.1    Barberan, A.2    Casamayor, E.O.3
  • 4
    • 79955057814 scopus 로고    scopus 로고
    • Examining the global distribution of dominant archaeal populations in soil
    • 21085198 10.1038/ismej.2010.171 1:CAS:528:DC%2BC3MXkvFahsLk%3D
    • Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N (2011) Examining the global distribution of dominant archaeal populations in soil. ISME J 5(5):908-917
    • (2011) ISME J , vol.5 , Issue.5 , pp. 908-917
    • Bates, S.T.1    Berg-Lyons, D.2    Caporaso, J.G.3    Walters, W.A.4    Knight, R.5    Fierer, N.6
  • 5
    • 0030860238 scopus 로고    scopus 로고
    • Molecular microbial diversity in soils from eastern Amazonia: Evidence for unusual microorganisms and microbial population shifts associated with deforestation
    • 9212415 1:CAS:528:DyaK2sXktlektLg%3D
    • Borneman J, Triplett EW (1997) Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation. Appl Environ Microbiol 63(7):2647-2653
    • (1997) Appl Environ Microbiol , vol.63 , Issue.7 , pp. 2647-2653
    • Borneman, J.1    Triplett, E.W.2
  • 6
    • 39149118031 scopus 로고    scopus 로고
    • Mesophilic Crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota
    • Brochier-Armanet C, Boussau B, Gribaldo S, Forterre P (2008) Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Microbiol 6(3):245-252
    • (2008) Nat Rev Microbiol , vol.6 , Issue.3 , pp. 245-252
    • Brochier-Armanet, C.1    Boussau, B.2    Gribaldo, S.3    Forterre, P.4
  • 8
    • 34250814203 scopus 로고    scopus 로고
    • Archaeal diversity in naturally occurring and impacted environments from a tropical region
    • 17584460 10.1111/j.1365-2672.2006.03230.x 1:CAS:528:DC%2BD2sXovVOqtrw%3D
    • Clementino MM, Fernandes CC, Vieira RP, Cardoso AM, Polycarpo CR, Martins OB (2007) Archaeal diversity in naturally occurring and impacted environments from a tropical region. J Appl Microbiol 103(1):141-151
    • (2007) J Appl Microbiol , vol.103 , Issue.1 , pp. 141-151
    • Clementino, M.M.1    Fernandes, C.C.2    Vieira, R.P.3    Cardoso, A.M.4    Polycarpo, C.R.5    Martins, O.B.6
  • 9
    • 79960289734 scopus 로고    scopus 로고
    • Bacteria and Archaea community structure in the rumen microbiome of goats (Capra hircus) from the semiarid region of Brazil
    • 21575735 10.1016/j.anaerobe.2011.04.018
    • Cunha IS, Barreto CC, Costa OY, Bomfim MA, Castro AP, Kruger RH, Quirino BF (2011) Bacteria and Archaea community structure in the rumen microbiome of goats (Capra hircus) from the semiarid region of Brazil. Anaerobe 17(3):118-124
    • (2011) Anaerobe , vol.17 , Issue.3 , pp. 118-124
    • Cunha, I.S.1    Barreto, C.C.2    Costa, O.Y.3    Bomfim, M.A.4    Castro, A.P.5    Kruger, R.H.6    Quirino, B.F.7
  • 10
    • 47349104971 scopus 로고    scopus 로고
    • Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields
    • 18458875 10.1007/s00203-008-0374-6 1:CAS:528:DC%2BD1cXosVCqt7Y%3D
    • de Castro AP, Quirino BF, Pappas G, Kurokawa AS, Neto EL, Kruger RH (2008) Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields. Arch Microbiol 190(2):129-139
    • (2008) Arch Microbiol , vol.190 , Issue.2 , pp. 129-139
    • De Castro, A.P.1    Quirino, B.F.2    Pappas, G.3    Kurokawa, A.S.4    Neto, E.L.5    Kruger, R.H.6
  • 11
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • 1608980 10.1073/pnas.89.12.5685 1:CAS:528:DyaK38Xks1Kntrs%3D
    • DeLong EF (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89(12):5685-5689
    • (1992) Proc Natl Acad Sci USA , vol.89 , Issue.12 , pp. 5685-5689
    • Delong, E.F.1
  • 12
    • 0031769609 scopus 로고    scopus 로고
    • Everything in moderation: Archaea as 'non-extremophiles'
    • 9914204 10.1016/S0959-437X(98)80032-4 1:CAS:528:DyaK1MXhs1yisg%3D%3D
    • DeLong EF (1998) Everything in moderation: archaea as 'non-extremophiles'. Curr Opin Genet Dev 8(6):649-654
    • (1998) Curr Opin Genet Dev , vol.8 , Issue.6 , pp. 649-654
    • Delong, E.F.1
  • 13
    • 52449138474 scopus 로고
    • Cerrado vegetation of Brazil
    • 10.1007/BF02859158
    • Eiten G (1972) Cerrado vegetation of Brazil. Bot Rev 38(2):201-341
    • (1972) Bot Rev , vol.38 , Issue.2 , pp. 201-341
    • Eiten, G.1
  • 16
    • 80255124817 scopus 로고    scopus 로고
    • Microbial diversity of an anoxic zone of a hydroelectric power station reservoir in Brazilian Amazonia
    • 21755290 10.1007/s00248-011-9906-8
    • Gracas DA, Miranda PR, Barauna RA, McCulloch JA, Ghilardi R Jr, Schneider MP, Silva A (2011) Microbial diversity of an anoxic zone of a hydroelectric power station reservoir in Brazilian Amazonia. Microb Ecol 62(4):853-861
    • (2011) Microb Ecol , vol.62 , Issue.4 , pp. 853-861
    • Gracas, D.A.1    Miranda, P.R.2    Barauna, R.A.3    McCulloch, J.A.4    Ghilardi, Jr.R.5    Schneider, M.P.6    Silva, A.7
  • 17
    • 77955432747 scopus 로고    scopus 로고
    • Amazonian anthrosols support similar microbial communities that differ distinctly from those extant in adjacent, unmodified soils of the same mineralogy
    • 20574826 10.1007/s00248-010-9689-3 1:CAS:528:DC%2BC3cXpvVWiu7g%3D
    • Grossman JM, O'Neill BE, Tsai SM, Liang B, Neves E, Lehmann J, Thies JE (2010) Amazonian anthrosols support similar microbial communities that differ distinctly from those extant in adjacent, unmodified soils of the same mineralogy. Microb Ecol 60(1):192-205
    • (2010) Microb Ecol , vol.60 , Issue.1 , pp. 192-205
    • Grossman, J.M.1    O'Neill, B.E.2    Tsai, S.M.3    Liang, B.4    Neves, E.5    Lehmann, J.6    Thies, J.E.7
  • 18
    • 0030894624 scopus 로고    scopus 로고
    • Novel group within the kingdom Crenarchaeota from boreal forest soil
    • 9023962 1:CAS:528:DyaK2sXhtVKrsLg%3D
    • Jurgens G, Lindstrom K, Saano A (1997) Novel group within the kingdom Crenarchaeota from boreal forest soil. Appl Environ Microbiol 63(2):803-805
    • (1997) Appl Environ Microbiol , vol.63 , Issue.2 , pp. 803-805
    • Jurgens, G.1    Lindstrom, K.2    Saano, A.3
  • 19
    • 34249106390 scopus 로고    scopus 로고
    • High abundance of Crenarchaeota in a temperate acidic forest soil
    • 17391330 10.1111/j.1574-6941.2007.00310.x 1:CAS:528:DC%2BD2sXmsFemuro%3D
    • Kemnitz D, Kolb S, Conrad R (2007) High abundance of Crenarchaeota in a temperate acidic forest soil. FEMS Microbiol Ecol 60(3):442-448
    • (2007) FEMS Microbiol Ecol , vol.60 , Issue.3 , pp. 442-448
    • Kemnitz, D.1    Kolb, S.2    Conrad, R.3
  • 20
    • 77952514796 scopus 로고    scopus 로고
    • Archaea, Bacteria, and algal plastids associated with the reef-building corals Siderastrea stellata and Mussismilia hispida from Buzios, South Atlantic Ocean, Brazil
    • 20013262 10.1007/s00248-009-9612-y 1:CAS:528:DC%2BC3cXkvVCqtbY%3D
    • Lins-de-Barros MM, Vieira RP, Cardoso AM, Monteiro VA, Turque AS, Silveira CB, Albano RM, Clementino MM, Martins OB (2010) Archaea, Bacteria, and algal plastids associated with the reef-building corals Siderastrea stellata and Mussismilia hispida from Buzios, South Atlantic Ocean, Brazil. Microb Ecol 59(3):523-532
    • (2010) Microb Ecol , vol.59 , Issue.3 , pp. 523-532
    • Lins-De-Barros, M.M.1    Vieira, R.P.2    Cardoso, A.M.3    Monteiro, V.A.4    Turque, A.S.5    Silveira, C.B.6    Albano, R.M.7    Clementino, M.M.8    Martins, O.B.9
  • 21
    • 33748713890 scopus 로고    scopus 로고
    • UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
    • 16893466 10.1186/1471-2105-7-371
    • Lozupone C, Hamady M, Knight R (2006) UniFrac - an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7:371
    • (2006) BMC Bioinformatics , vol.7 , pp. 371
    • Lozupone, C.1    Hamady, M.2    Knight, R.3
  • 22
    • 0034708178 scopus 로고    scopus 로고
    • Biodiversity hotspots for conservation priorities
    • 10706275 10.1038/35002501 1:CAS:528:DC%2BD3cXhs1Olsr4%3D
    • Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GA, Kent J (2000) Biodiversity hotspots for conservation priorities. Nature 403(6772):853-858
    • (2000) Nature , vol.403 , Issue.6772 , pp. 853-858
    • Myers, N.1    Mittermeier, R.A.2    Mittermeier, C.G.3    Da Fonseca, G.A.4    Kent, J.5
  • 23
    • 0042853314 scopus 로고    scopus 로고
    • Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR
    • 12919414 10.1046/j.1462-2920.2003.00476.x 1:CAS:528:DC%2BD3sXnslehtr8%3D
    • Ochsenreiter T, Selezi D, Quaiser A, Bonch-Osmolovskaya L, Schleper C (2003) Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR. Environ Microbiol 5(9):787-797
    • (2003) Environ Microbiol , vol.5 , Issue.9 , pp. 787-797
    • Ochsenreiter, T.1    Selezi, D.2    Quaiser, A.3    Bonch-Osmolovskaya, L.4    Schleper, C.5
  • 24
    • 83155185429 scopus 로고    scopus 로고
    • Molecular characterization of the archaeal community in an Amazonian wetland soil and culture-dependent isolation of methanogenic archaea
    • 10.3390/d2071026 1:CAS:528:DC%2BC3cXpvVCrsr0%3D
    • Pazinato JM, Paulo EN, Mendes LW, Vazoller RF, Tsai SM (2010) Molecular characterization of the archaeal community in an Amazonian wetland soil and culture-dependent isolation of methanogenic archaea. Diversity 2:1026-1047
    • (2010) Diversity , vol.2 , pp. 1026-1047
    • Pazinato, J.M.1    Paulo, E.N.2    Mendes, L.W.3    Vazoller, R.F.4    Tsai, S.M.5
  • 27
    • 84858195663 scopus 로고    scopus 로고
    • Diversity and three-dimensional structures of the alpha Mcr of the methanogenic Archaea from the anoxic region of Tucurui Lake, in Eastern Brazilian Amazonia
    • 22481885 10.1590/S1415-47572012005000004
    • Santana PB, Junior RG, Alves CN, Silva JL, McCulloch JA, Schneider MP, da Costa da Silva A (2012) Diversity and three-dimensional structures of the alpha Mcr of the methanogenic Archaea from the anoxic region of Tucurui Lake, in Eastern Brazilian Amazonia. Genet Mol Biol 35(1):126-133
    • (2012) Genet Mol Biol , vol.35 , Issue.1 , pp. 126-133
    • Santana, P.B.1    Junior, R.G.2    Alves, C.N.3    Silva, J.L.4    McCulloch, J.A.5    Schneider, M.P.6    Da Costa Da Silva, A.7
  • 28
    • 10344228215 scopus 로고    scopus 로고
    • Status of the microbial census
    • 15590780 10.1128/MMBR.68.4.686-691.2004
    • Schloss PD, Handelsman J (2004) Status of the microbial census. Microbiol Mol Biol Rev 68(4):686-691
    • (2004) Microbiol Mol Biol Rev , vol.68 , Issue.4 , pp. 686-691
    • Schloss, P.D.1    Handelsman, J.2
  • 30
    • 77953323744 scopus 로고    scopus 로고
    • The influence of different land uses on the structure of archaeal communities in Amazonian anthrosols based on 16S rRNA and amoA genes
    • 20204349 10.1007/s00248-010-9638-1 1:CAS:528:DC%2BC3cXntVCrsro%3D
    • Taketani RG, Tsai SM (2010) The influence of different land uses on the structure of archaeal communities in Amazonian anthrosols based on 16S rRNA and amoA genes. Microb Ecol 59(4):734-743
    • (2010) Microb Ecol , vol.59 , Issue.4 , pp. 734-743
    • Taketani, R.G.1    Tsai, S.M.2
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 33
    • 84856324028 scopus 로고    scopus 로고
    • O conceito de savana e de seu componente Cerrado
    • S.M. Sano S. Almeida J.F. Ribeiro (eds) 1 Embrapa Cerrados Brasília
    • Walter BMT, de Carvalho AM, Ribeiro JF (2008) O conceito de savana e de seu componente Cerrado. In: Sano SM, Almeida SP, Ribeiro JF (eds) Cerrado: ecologia e flora, vol 1. Embrapa Cerrados, Brasília, pp 21-45
    • (2008) Cerrado: Ecologia e Flora , pp. 21-45
    • Walter, B.M.T.1    De Carvalho, A.M.2    Ribeiro, J.F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.