-
1
-
-
0019883537
-
Base pairing of RNA i with its complementary sequence in the primer precursor inhibits ColE1 replication
-
Lacatena, R.M. and Cesareni, G. (1981) Base pairing of RNA I with its complementary sequence in the primer precursor inhibits ColE1 replication. Nature 294, 623-626
-
(1981)
Nature
, vol.294
, pp. 623-626
-
-
Lacatena, R.M.1
Cesareni, G.2
-
2
-
-
78649885541
-
RNAs actively cycle on the Sm-like protein Hfq
-
Fender, A., Elf, J., Hampel, K., Zimmermann, B. and Wagner, E.G. (2010) RNAs actively cycle on the Sm-like protein Hfq. Genes Dev. 24, 2621-2626
-
(2010)
Genes Dev
, vol.24
, pp. 2621-2626
-
-
Fender, A.1
Elf, J.2
Hampel, K.3
Zimmermann, B.4
Wagner, E.G.5
-
3
-
-
80053019485
-
Regulation by small RNAs in bacteria: Expanding frontiers
-
Storz, G., Vogel, J. and Wassarman, K.M. (2011) Regulation by small RNAs in bacteria: expanding frontiers. Mol. Cell 43, 880-891
-
(2011)
Mol. Cell
, vol.43
, pp. 880-891
-
-
Storz, G.1
Vogel, J.2
Wassarman, K.M.3
-
4
-
-
0040175431
-
Do natural antisense transcripts make sense in eukaryotes?
-
Vanhee-Brossollet, C. and Vaquero, C. (1998) Do natural antisense transcripts make sense in eukaryotes? Gene 211, 1-9
-
(1998)
Gene
, vol.211
, pp. 1-9
-
-
Vanhee-Brossollet, C.1
Vaquero, C.2
-
5
-
-
24644472515
-
Antisense transcription in the mammalian transcriptome
-
Katayama, S., Tomaru, Y., Kasukawa, T., Waki, K., Nakanishi, M., Nakamura, M., Nishida, H., Yap, C.C., Suzuki, M., Kawai, J. et al. (2005) Antisense transcription in the mammalian transcriptome. Science 309, 1564-1566
-
(2005)
Science
, vol.309
, pp. 1564-1566
-
-
Katayama, S.1
Tomaru, Y.2
Kasukawa, T.3
Waki, K.4
Nakanishi, M.5
Nakamura, M.6
Nishida, H.7
Yap, C.C.8
Suzuki, M.9
Kawai, J.10
-
6
-
-
33646473694
-
Complex loci in human and mouse genomes
-
Engstrom, P.G., Suzuki, H., Ninomiya, N., Akalin, A., Sessa, L., Lavorgna, G., Brozzi, A., Luzi, L., Tan, S.L., Yang, L. et al. (2006) Complex loci in human and mouse genomes. PLoS Genet. 2, e47
-
(2006)
PLoS Genet
, vol.2
-
-
Engstrom, P.G.1
Suzuki, H.2
Ninomiya, N.3
Akalin, A.4
Sessa, L.5
Lavorgna, G.6
Brozzi, A.7
Luzi, L.8
Tan, S.L.9
Yang, L.10
-
7
-
-
57849105533
-
The antisense transcriptomes of human cells
-
He, Y., Vogelstein, B., Velculescu, V.E., Papadopoulos, N. and Kinzler, K.W. (2008) The antisense transcriptomes of human cells. Science 322, 1855-1857
-
(2008)
Science
, vol.322
, pp. 1855-1857
-
-
He, Y.1
Vogelstein, B.2
Velculescu, V.E.3
Papadopoulos, N.4
Kinzler, K.W.5
-
8
-
-
79952255050
-
Transcriptional regulation of Oct4 by a long non-coding RNA antisense to Oct4-pseudogene 5
-
Hawkins, P.G. and Morris, K.V. (2010) Transcriptional regulation of Oct4 by a long non-coding RNA antisense to Oct4-pseudogene 5. Transcription 1, 165-175
-
(2010)
Transcription
, vol.1
, pp. 165-175
-
-
Hawkins, P.G.1
Morris, K.V.2
-
9
-
-
58149528403
-
Antisense transcription: A critical look in both directions
-
Beiter, T., Reich, E., Williams, R.W. and Simon, P. (2008) Antisense transcription: a critical look in both directions. Cell. Mol. Life Sci. 66, 94-112
-
(2008)
Cell. Mol. Life Sci
, vol.66
, pp. 94-112
-
-
Beiter, T.1
Reich, E.2
Williams, R.W.3
Simon, P.4
-
10
-
-
0037673656
-
Antisense transcripts with FANTOM2 clone set and their implications for gene regulation
-
Kiyosawa, H., Yamanaka, I., Osato, N., Kondo, S. and Hayashizaki, Y. (2003) Antisense transcripts with FANTOM2 clone set and their implications for gene regulation. Genome Res. 13, 1324-1334
-
(2003)
Genome Res
, vol.13
, pp. 1324-1334
-
-
Kiyosawa, H.1
Yamanaka, I.2
Osato, N.3
Kondo, S.4
Hayashizaki, Y.5
-
11
-
-
69249217649
-
Regulatory roles of natural antisense transcripts
-
Faghihi, M.A. and Wahlestedt, C. (2009) Regulatory roles of natural antisense transcripts. Nat. Rev. Mol. Cell Biol. 10, 637-643
-
(2009)
Nat. Rev. Mol. Cell Biol
, vol.10
, pp. 637-643
-
-
Faghihi, M.A.1
Wahlestedt, C.2
-
12
-
-
79956306617
-
Regulation of X-chromosome inactivation by the X-inactivation centre
-
Augui, S., Nora, E.P. and Heard, E. (2011) Regulation of X-chromosome inactivation by the X-inactivation centre. Nat. Rev. Genet. 12, 429-442
-
(2011)
Nat. Rev. Genet
, vol.12
, pp. 429-442
-
-
Augui, S.1
Nora, E.P.2
Heard, E.3
-
13
-
-
41149112564
-
A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition
-
Beltran, M., Puig, I., Pena, C., Garcia, J.M., Alvarez, A.B., Pena, R., Bonilla, F. and de Herreros, A.G. (2008) A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition. Genes Dev. 22, 756-769
-
(2008)
Genes Dev
, vol.22
, pp. 756-769
-
-
Beltran, M.1
Puig, I.2
Pena, C.3
Garcia, J.M.4
Alvarez, A.B.5
Pena, R.6
Bonilla, F.7
De Herreros, A.G.8
-
14
-
-
0034646647
-
Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA
-
Hastings, M.L., Ingle, H.A., Lazar, M.A. and Munroe, S.H. (2000) Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA. J. Biol. Chem. 275, 11507-11513
-
(2000)
J. Biol. Chem
, vol.275
, pp. 11507-11513
-
-
Hastings, M.L.1
Ingle, H.A.2
Lazar, M.A.3
Munroe, S.H.4
-
15
-
-
2442544693
-
Prolonged hypoxia differentially regulates hypoxia-inducible factor (HIF)-1α and HIF-2α expression in lung epithelial cells: Implication of natural antisense HIF-1α
-
Uchida, T., Rossignol, F., Matthay, M.A., Mounier, R., Couette, S., Clottes, E. and Clerici, C. (2004) Prolonged hypoxia differentially regulates hypoxia-inducible factor (HIF)-1α and HIF-2α expression in lung epithelial cells: implication of natural antisense HIF-1α. J. Biol. Chem. 279, 14871-14878
-
(2004)
J. Biol. Chem
, vol.279
, pp. 14871-14878
-
-
Uchida, T.1
Rossignol, F.2
Matthay, M.A.3
Mounier, R.4
Couette, S.5
Clottes, E.6
Clerici, C.7
-
16
-
-
77952698932
-
Evidence for natural antisense transcriptmediated inhibition of microRNA function
-
Faghihi, M.A., Zhang, M., Huang, J., Modarresi, F., Van der Brug, M.P., Nalls, M.A., Cookson, M.R., St Laurent, 3rd, G. and Wahlestedt, C. (2010) Evidence for natural antisense transcriptmediated inhibition of microRNA function. Genome Biol. 11, R56
-
(2010)
Genome Biol
, vol.11
-
-
Faghihi, M.A.1
Zhang, M.2
Huang, J.3
Modarresi, F.4
Van Der Brug, M.P.5
Nalls, M.A.6
Cookson, M.R.7
St Laurent Iii, G.8
Wahlestedt, C.9
-
17
-
-
46749083733
-
Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of β-secretase
-
Faghihi, M.A., Modarresi, F., Khalil, A.M., Wood, D.E., Sahagan, B.G., Morgan, T.E., Finch, C.E., St Laurent, 3rd, G., Kenny, P.J. and Wahlestedt, C. (2008) Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of β-secretase. Nat. Med. 14, 723-730
-
(2008)
Nat. Med
, vol.14
, pp. 723-730
-
-
Faghihi, M.A.1
Modarresi, F.2
Khalil, A.M.3
Wood, D.E.4
Sahagan, B.G.5
Morgan, T.E.6
Finch, C.E.7
St Laurent Iii, G.8
Kenny, P.J.9
Wahlestedt, C.10
-
18
-
-
4544305449
-
Effects of length and location on the cellular response to double-stranded RNA
-
Wang, Q. and Carmichael, G.G. (2004) Effects of length and location on the cellular response to double-stranded RNA. Microbiol. Mol. Biol. Rev. 68, 432-452
-
(2004)
Microbiol. Mol. Biol. Rev
, vol.68
, pp. 432-452
-
-
Wang, Q.1
Carmichael, G.G.2
-
19
-
-
77952293063
-
Functions and regulation of RNA editing by ADAR deaminases
-
Nishikura, K. (2010) Functions and regulation of RNA editing by ADAR deaminases. Annu. Rev. Biochem. 79, 321-349
-
(2010)
Annu. Rev. Biochem
, vol.79
, pp. 321-349
-
-
Nishikura, K.1
-
20
-
-
0035943347
-
The fate of dsRNA in the nucleus: A p54(nrb)- containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs
-
Zhang, Z. and Carmichael, G.G. (2001) The fate of dsRNA in the nucleus: a p54(nrb)- containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Cell 106, 465-475
-
(2001)
Cell
, vol.106
, pp. 465-475
-
-
Zhang, Z.1
Carmichael, G.G.2
-
21
-
-
3543004084
-
Systematic identification of abundant A-to-I editing sites in the human transcriptome
-
Levanon, E.Y., Eisenberg, E., Yelin, R., Nemzer, S., Hallegger, M., Shemesh, R., Fligelman, Z.Y., Shoshan, A., Pollock, S.R., Sztybel, D. et al. (2004) Systematic identification of abundant A-to-I editing sites in the human transcriptome. Nat. Biotechnol. 22, 1001-1005
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 1001-1005
-
-
Levanon, E.Y.1
Eisenberg, E.2
Yelin, R.3
Nemzer, S.4
Hallegger, M.5
Shemesh, R.6
Fligelman, Z.Y.7
Shoshan, A.8
Pollock, S.R.9
Sztybel, D.10
-
22
-
-
24644480950
-
Is there any sense in antisense editing?
-
Neeman, Y., Dahary, D., Levanon, E.Y., Sorek, R. and Eisenberg, E. (2005) Is there any sense in antisense editing? Trends Genet. 21, 544-547
-
(2005)
Trends Genet
, vol.21
, pp. 544-547
-
-
Neeman, Y.1
Dahary, D.2
Levanon, E.Y.3
Sorek, R.4
Eisenberg, E.5
-
23
-
-
0037062951
-
RNA interference
-
Hannon, G.J. (2002) RNA interference. Nature 418, 244-251
-
(2002)
Nature
, vol.418
, pp. 244-251
-
-
Hannon, G.J.1
-
24
-
-
78650306521
-
Small RNA sorting: Matchmaking for Argonautes
-
Czech, B. and Hannon, G.J. (2011) Small RNA sorting: matchmaking for Argonautes. Nat. Rev. Genet. 12, 19-31
-
(2011)
Nat. Rev. Genet
, vol.12
, pp. 19-31
-
-
Czech, B.1
Hannon, G.J.2
-
25
-
-
44349159416
-
Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
-
Tam, O.H., Aravin, A.A., Stein, P., Girard, A., Murchison, E.P., Cheloufi, S., Hodges, E., Anger, M., Sachidanandam, R., Schultz, R.M. et al. (2008) Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes. Nature 453, 534-538
-
(2008)
Nature
, vol.453
, pp. 534-538
-
-
Tam, O.H.1
Aravin, A.A.2
Stein, P.3
Girard, A.4
Murchison, E.P.5
Cheloufi, S.6
Hodges, E.7
Anger, M.8
Sachidanandam, R.9
Schultz, R.M.10
-
26
-
-
44349130233
-
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
-
Watanabe, T., Totoki, Y., Toyoda, A., Kaneda, M., Kuramochi-Miyagawa, S., Obata, Y., Chiba, H., Kohara, Y., Kono, T., Nakano, T. et al. (2008) Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes. Nature 453, 539-543
-
(2008)
Nature
, vol.453
, pp. 539-543
-
-
Watanabe, T.1
Totoki, Y.2
Toyoda, A.3
Kaneda, M.4
Kuramochi-Miyagawa, S.5
Obata, Y.6
Chiba, H.7
Kohara, Y.8
Kono, T.9
Nakano, T.10
-
27
-
-
33745080545
-
RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals
-
Faghihi, M.A. and Wahlestedt, C. (2006) RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals. Genome Biol. 7, R38
-
(2006)
Genome Biol
, vol.7
-
-
Faghihi, M.A.1
Wahlestedt, C.2
-
28
-
-
84869091742
-
Convergent transcription induces transcriptional gene silencing in fission yeast and mammalian cells
-
Gullerova, M. and Proudfoot, N.J. (2012) Convergent transcription induces transcriptional gene silencing in fission yeast and mammalian cells. Nat. Struct. Mol. Biol. 19, 1193-1201
-
(2012)
Nat. Struct. Mol. Biol
, vol.19
, pp. 1193-1201
-
-
Gullerova, M.1
Proudfoot, N.J.2
-
29
-
-
19444377759
-
Transcriptional interference: A crash course
-
Shearwin, K.E., Callen, B.P. and Egan, J.B. (2005) Transcriptional interference: a crash course. Trends Genet. 21, 339-345
-
(2005)
Trends Genet
, vol.21
, pp. 339-345
-
-
Shearwin, K.E.1
Callen, B.P.2
Egan, J.B.3
-
30
-
-
13944265983
-
Vigilins bind to promiscuously A-to-I-edited RNAs and are involved in the formation of heterochromatin
-
Wang, Q., Zhang, Z., Blackwell, K. and Carmichael, G.G. (2005) Vigilins bind to promiscuously A-to-I-edited RNAs and are involved in the formation of heterochromatin. Curr. Biol. 15, 384-391
-
(2005)
Curr. Biol
, vol.15
, pp. 384-391
-
-
Wang, Q.1
Zhang, Z.2
Blackwell, K.3
Carmichael, G.G.4
-
31
-
-
0037075032
-
The non-coding Air RNA is required for silencing autosomal imprinted genes
-
Sleutels, F., Zwart, R. and Barlow, D.P. (2002) The non-coding Air RNA is required for silencing autosomal imprinted genes. Nature 415, 810-813
-
(2002)
Nature
, vol.415
, pp. 810-813
-
-
Sleutels, F.1
Zwart, R.2
Barlow, D.P.3
-
32
-
-
57349086045
-
Functional insights into long antisense noncoding RNA Kcnq1ot1 mediated bidirectional silencing
-
Kanduri, C. (2008) Functional insights into long antisense noncoding RNA Kcnq1ot1 mediated bidirectional silencing. RNA Biol. 5, 208-211
-
(2008)
RNA Biol
, vol.5
, pp. 208-211
-
-
Kanduri, C.1
-
33
-
-
38049155825
-
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
-
Yu, W., Gius, D., Onyango, P., Muldoon-Jacobs, K., Karp, J., Feinberg, A.P. and Cui, H. (2008) Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 451, 202-206
-
(2008)
Nature
, vol.451
, pp. 202-206
-
-
Yu, W.1
Gius, D.2
Onyango, P.3
Muldoon-Jacobs, K.4
Karp, J.5
Feinberg, A.P.6
Cui, H.7
-
34
-
-
77950841042
-
Transcriptional gene silencing through epigenetic changes mediated by non-coding RNAs
-
Malecova, B. and Morris, K.V. (2010) Transcriptional gene silencing through epigenetic changes mediated by non-coding RNAs. Curr. Opin. Mol. Ther. 12, 214-222
-
(2010)
Curr. Opin. Mol. Ther
, vol.12
, pp. 214-222
-
-
Malecova, B.1
Morris, K.V.2
-
35
-
-
84860353437
-
Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation
-
Modarresi, F., Faghihi, M.A., Lopez-Toledano, M.A., Fatemi, R.P., Magistri, M., Brothers, S.P., van der Brug, M.P. and Wahlestedt, C. (2012) Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation. Nat. Biotechnol. 30, 453-459
-
(2012)
Nat. Biotechnol
, vol.30
, pp. 453-459
-
-
Modarresi, F.1
Faghihi, M.A.2
Lopez-Toledano, M.A.3
Fatemi, R.P.4
Magistri, M.5
Brothers, S.P.6
Van Der Brug, M.P.7
Wahlestedt, C.8
-
36
-
-
4444376317
-
Over 20% of human transcripts might form sense-antisense pairs
-
Chen, J., Sun, M., Kent, W.J., Huang, X., Xie, H., Wang, W., Zhou, G., Shi, R.Z. and Rowley, J.D. (2004) Over 20% of human transcripts might form sense-antisense pairs. Nucleic Acids Res. 32, 4812-4820
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4812-4820
-
-
Chen, J.1
Sun, M.2
Kent, W.J.3
Huang, X.4
Xie, H.5
Wang, W.6
Zhou, G.7
Shi, R.Z.8
Rowley, J.D.9
-
37
-
-
36249017308
-
Widespread monoallelic expression on human autosomes
-
Gimelbrant, A., Hutchinson, J.N., Thompson, B.R. and Chess, A. (2007) Widespread monoallelic expression on human autosomes. Science 318, 1136-1140
-
(2007)
Science
, vol.318
, pp. 1136-1140
-
-
Gimelbrant, A.1
Hutchinson, J.N.2
Thompson, B.R.3
Chess, A.4
-
38
-
-
65549141701
-
Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues
-
Carlile, M., Swan, D., Jackson, K., Preston-Fayers, K., Ballester, B., Flicek, P. and Werner, A. (2009) Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues. Nucleic Acids Res. 37, 2274-2282
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 2274-2282
-
-
Carlile, M.1
Swan, D.2
Jackson, K.3
Preston-Fayers, K.4
Ballester, B.5
Flicek, P.6
Werner, A.7
-
39
-
-
77955941659
-
What are natural antisense transcripts good for?
-
Werner, A. and Swan, D. (2010) What are natural antisense transcripts good for? Biochem. Soc. Trans. 38, 1144-1149
-
(2010)
Biochem. Soc. Trans
, vol.38
, pp. 1144-1149
-
-
Werner, A.1
Swan, D.2
|