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Volumn 117, Issue 22, 2013, Pages 6656-6666

Nonempirical energetic analysis of reactivity and covalent inhibition of fatty acid amide hydrolase

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION ENERGY; ACYLATION; AMIDES; COMPUTATION THEORY; CONFORMATIONS; HYDROLASES; MOLECULES; STABILIZATION;

EID: 84879132023     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp401834v     Document Type: Article
Times cited : (13)

References (45)
  • 1
    • 33947547892 scopus 로고
    • Molecular Architecture and Biological Reactions
    • Pauling, L. Molecular Architecture and Biological Reactions Chem. Eng. News Archive 1946, 24, 1375-1377
    • (1946) Chem. Eng. News Archive , vol.24 , pp. 1375-1377
    • Pauling, L.1
  • 5
    • 0030037917 scopus 로고    scopus 로고
    • Inhibition of Oleamide Hydrolase Catalyzed Hydrolysis of the Endogenous Sleep-Inducing Lipid cis-9-Octadecenamide
    • Patterson, J. E.; Ollmann, I. R.; Cravatt, B. F.; Boger, D. L.; Wong, C.-H.; Lerner, R. A. Inhibition of Oleamide Hydrolase Catalyzed Hydrolysis of the Endogenous Sleep-Inducing Lipid cis-9-Octadecenamide J. Am. Chem. Soc. 1996, 118, 5938-5945
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 5938-5945
    • Patterson, J.E.1    Ollmann, I.R.2    Cravatt, B.F.3    Boger, D.L.4    Wong, C.-H.5    Lerner, R.A.6
  • 7
    • 0029904838 scopus 로고    scopus 로고
    • Molecular Characterization of an Enzyme that Degrades Neuromodulatory Fatty-acid Amides
    • Cravatt, B. F.; Giang, D. K.; Mayfield, S. P.; Boger, D. L.; Lerner, R. A.; Gilula, N. B. Molecular Characterization of an Enzyme that Degrades Neuromodulatory Fatty-acid Amides Nature 1996, 384, 83-87
    • (1996) Nature , vol.384 , pp. 83-87
    • Cravatt, B.F.1    Giang, D.K.2    Mayfield, S.P.3    Boger, D.L.4    Lerner, R.A.5    Gilula, N.B.6
  • 8
    • 0037177601 scopus 로고    scopus 로고
    • Endocannabinoid Signaling in the Brain
    • Wilson, R. I.; Nicoll, R. A. Endocannabinoid Signaling in the Brain Science 2002, 296, 678-682
    • (2002) Science , vol.296 , pp. 678-682
    • Wilson, R.I.1    Nicoll, R.A.2
  • 11
    • 0036011159 scopus 로고    scopus 로고
    • Fatty Acid Amide Hydrolase, an Enzyme with Many Bioactive Substrates. Possible Therapeutic Implications
    • Bisogno, T.; De Petrocellis, L.; Di Marzo, V. Fatty Acid Amide Hydrolase, an Enzyme with Many Bioactive Substrates. Possible Therapeutic Implications Curr. Pharm. Des. 2002, 8, 533-547
    • (2002) Curr. Pharm. Des. , vol.8 , pp. 533-547
    • Bisogno, T.1    De Petrocellis, L.2    Di Marzo, V.3
  • 13
    • 0030041883 scopus 로고    scopus 로고
    • Structure Determination of an Endogenous Sleep-Inducing Lipid, cis-9-Octadecenamide (Oleamide): A Synthetic Approach to the Chemical Analysis of Trace Quantities of a Natural Product
    • Cravatt, B. F.; Lerner, R. A.; Boger, D. L. Structure Determination of an Endogenous Sleep-Inducing Lipid, cis-9-Octadecenamide (Oleamide): A Synthetic Approach to the Chemical Analysis of Trace Quantities of a Natural Product J. Am. Chem. Soc. 1996, 118, 580-590
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 580-590
    • Cravatt, B.F.1    Lerner, R.A.2    Boger, D.L.3
  • 14
    • 34548504316 scopus 로고    scopus 로고
    • Fatty Acid Amide Hydrolase: From Characterization to Therapeutics
    • Labar, G.; Michaux, C. Fatty Acid Amide Hydrolase: From Characterization to Therapeutics Chem. Biodiversity 2007, 4, 1882-1902
    • (2007) Chem. Biodiversity , vol.4 , pp. 1882-1902
    • Labar, G.1    Michaux, C.2
  • 15
    • 2242490907 scopus 로고    scopus 로고
    • Structural Adaptations in a Membrane Enzyme That Terminates Endocannabinoid Signaling
    • Bracey, M. H.; Hanson, M. A.; Masuda, K. R.; Stevens, R. C.; Cravatt, B. F. Structural Adaptations in a Membrane Enzyme That Terminates Endocannabinoid Signaling Science 2002, 298, 1793-1796
    • (2002) Science , vol.298 , pp. 1793-1796
    • Bracey, M.H.1    Hanson, M.A.2    Masuda, K.R.3    Stevens, R.C.4    Cravatt, B.F.5
  • 16
    • 25444523794 scopus 로고    scopus 로고
    • QM/MM Modelling of Oleamide Hydrolysis in Fatty Acid Amide Hydrolase (FAAH) Reveals a new Mechanism of Nucleophile Activation
    • Lodola, A.; Mor, M.; Hermann, J. C.; Tarzia, G.; Piomelli, D.; Mulholland, A. J. QM/MM Modelling of Oleamide Hydrolysis in Fatty Acid Amide Hydrolase (FAAH) Reveals a new Mechanism of Nucleophile Activation Chem. Commun. 2005, 4399
    • (2005) Chem. Commun. , pp. 4399
    • Lodola, A.1    Mor, M.2    Hermann, J.C.3    Tarzia, G.4    Piomelli, D.5    Mulholland, A.J.6
  • 17
    • 33846413566 scopus 로고    scopus 로고
    • Conformational Effects in Enzyme Catalysis: Reaction via a High Energy Conformation in Fatty Acid Amide Hydrolase
    • Lodola, A.; Mor, M.; Zurek, J.; Tarzia, G.; Piomelli, D.; Harvey, J. N.; Mulholland, A. J. Conformational Effects in Enzyme Catalysis: Reaction via a High Energy Conformation in Fatty Acid Amide Hydrolase Biophys. J. 2007, 92, L20-L22
    • (2007) Biophys. J. , vol.92
    • Lodola, A.1    Mor, M.2    Zurek, J.3    Tarzia, G.4    Piomelli, D.5    Harvey, J.N.6    Mulholland, A.J.7
  • 18
    • 77956595530 scopus 로고    scopus 로고
    • Structural Fluctuations in Enzyme-Catalyzed Reactions: Determinants of Reactivity in Fatty Acid Amide Hydrolase from Multivariate Statistical Analysis of Quantum Mechanics/Molecular Mechanics Paths
    • Lodola, A.; Sirirak, J.; Fey, N.; Rivara, S.; Mor, M.; Mulholland, A. J. Structural Fluctuations in Enzyme-Catalyzed Reactions: Determinants of Reactivity in Fatty Acid Amide Hydrolase from Multivariate Statistical Analysis of Quantum Mechanics/Molecular Mechanics Paths J. Chem. Theory Comput. 2010, 6, 2948-2960
    • (2010) J. Chem. Theory Comput. , vol.6 , pp. 2948-2960
    • Lodola, A.1    Sirirak, J.2    Fey, N.3    Rivara, S.4    Mor, M.5    Mulholland, A.J.6
  • 19
    • 80255131067 scopus 로고    scopus 로고
    • Application of a SCC-DFTB QM/MM Approach to the Investigation of the Catalytic Mechanism of Fatty Acid Amide Hydrolase
    • Capoferri, L.; Mor, M.; Sirirak, J.; Chudyk, E.; Mulholland, A.; Lodola, A. Application of a SCC-DFTB QM/MM Approach to the Investigation of the Catalytic Mechanism of Fatty Acid Amide Hydrolase J. Mol. Model. 2011, 17, 2375-2383
    • (2011) J. Mol. Model. , vol.17 , pp. 2375-2383
    • Capoferri, L.1    Mor, M.2    Sirirak, J.3    Chudyk, E.4    Mulholland, A.5    Lodola, A.6
  • 20
    • 33845923661 scopus 로고    scopus 로고
    • Elucidation of Hydrolysis Mechanisms for Fatty Acid Amide Hydrolase and Its Lys142Ala Variant via QM/MM Simulations
    • Tubert-Brohman, I.; Acevedo, O.; Jorgensen, W. L. Elucidation of Hydrolysis Mechanisms for Fatty Acid Amide Hydrolase and Its Lys142Ala Variant via QM/MM Simulations J. Am. Chem. Soc. 2006, 128, 16904-16913
    • (2006) J. Am. Chem. Soc. , vol.128 , pp. 16904-16913
    • Tubert-Brohman, I.1    Acevedo, O.2    Jorgensen, W.L.3
  • 21
    • 4744354729 scopus 로고    scopus 로고
    • Cyclohexylcarbamic Acid 3′- or 4′-Substituted Biphenyl-3-yl Esters as Fatty Acid Amide Hydrolase Inhibitors: Synthesis, Quantitative Structure-Activity Relationships, and Molecular Modeling Studies
    • Mor, M.; Rivara, S.; Lodola, A.; Plazzi, P. V.; Tarzia, G.; Duranti, A.; Tontini, A.; Piersanti, G.; Kathuria, S.; Piomelli, D. Cyclohexylcarbamic Acid 3′- or 4′-Substituted Biphenyl-3-yl Esters as Fatty Acid Amide Hydrolase Inhibitors: Synthesis, Quantitative Structure-Activity Relationships, and Molecular Modeling Studies J. Med. Chem. 2004, 47, 4998-5008
    • (2004) J. Med. Chem. , vol.47 , pp. 4998-5008
    • Mor, M.1    Rivara, S.2    Lodola, A.3    Plazzi, P.V.4    Tarzia, G.5    Duranti, A.6    Tontini, A.7    Piersanti, G.8    Kathuria, S.9    Piomelli, D.10
  • 22
    • 45749124873 scopus 로고    scopus 로고
    • Synthesis and Quantitative Structure-Activity Relationship of Fatty Acid Amide Hydrolase Inhibitors: Modulation at the N-Portion of Biphenyl-3-yl Alkylcarbamates
    • Mor, M.; Lodola, A.; Rivara, S.; Vacondio, F.; Duranti, A.; Tontini, A.; Sanchini, S.; Piersanti, G.; Clapper, J. R.; King, A. R. Synthesis and Quantitative Structure-Activity Relationship of Fatty Acid Amide Hydrolase Inhibitors: Modulation at the N-Portion of Biphenyl-3-yl Alkylcarbamates J. Med. Chem. 2008, 51, 3487-3498
    • (2008) J. Med. Chem. , vol.51 , pp. 3487-3498
    • Mor, M.1    Lodola, A.2    Rivara, S.3    Vacondio, F.4    Duranti, A.5    Tontini, A.6    Sanchini, S.7    Piersanti, G.8    Clapper, J.R.9    King, A.R.10
  • 23
    • 0141733197 scopus 로고    scopus 로고
    • Evidence for Distinct Roles in Catalysis for Residues of the Serine-serine-lysine Catalytic Triad of Fatty Acid Amide Hydrolase
    • McKinney, M. K.; Cravatt, B. F. Evidence for Distinct Roles in Catalysis for Residues of the Serine-serine-lysine Catalytic Triad of Fatty Acid Amide Hydrolase J. Biol. Chem. 2003, M303922200
    • (2003) J. Biol. Chem. , pp. 303922200
    • McKinney, M.K.1    Cravatt, B.F.2
  • 24
    • 0034705440 scopus 로고    scopus 로고
    • Clarifying the Catalytic Roles of Conserved Residues in the Amidase Signature Family
    • Patricelli, M. P.; Cravatt, B. F. Clarifying the Catalytic Roles of Conserved Residues in the Amidase Signature Family J. Biol. Chem. 2000, 275, 19177-19184
    • (2000) J. Biol. Chem. , vol.275 , pp. 19177-19184
    • Patricelli, M.P.1    Cravatt, B.F.2
  • 25
    • 0033607236 scopus 로고    scopus 로고
    • Fatty Acid Amide Hydrolase Competitively Degrades Bioactive Amides and Esters through a Nonconventional Catalytic Mechanism
    • Patricelli, M. P.; Cravatt, B. F. Fatty Acid Amide Hydrolase Competitively Degrades Bioactive Amides and Esters through a Nonconventional Catalytic Mechanism Biochemistry 1999, 38, 14125-14130
    • (1999) Biochemistry , vol.38 , pp. 14125-14130
    • Patricelli, M.P.1    Cravatt, B.F.2
  • 26
    • 0033520099 scopus 로고    scopus 로고
    • Chemical and Mutagenic Investigations of Fatty Acid Amide Hydrolase: Evidence for a Family of Serine Hydrolases with Distinct Catalytic Properties
    • Patricelli, M. P.; Lovato, M. A.; Cravatt, B. F. Chemical and Mutagenic Investigations of Fatty Acid Amide Hydrolase: Evidence for a Family of Serine Hydrolases with Distinct Catalytic Properties Biochemistry 1999, 38, 9804-9812
    • (1999) Biochemistry , vol.38 , pp. 9804-9812
    • Patricelli, M.P.1    Lovato, M.A.2    Cravatt, B.F.3
  • 27
    • 0022075532 scopus 로고
    • The Physical Nature of Catalytic Activity due to the Molecular Environment in Terms of Intermolecular Interaction Theory: Derivation of Simplified Models
    • Sokalski, W. A. The Physical Nature of Catalytic Activity due to the Molecular Environment in Terms of Intermolecular Interaction Theory: Derivation of Simplified Models J. Mol. Catal. 1985, 30, 395-410
    • (1985) J. Mol. Catal. , vol.30 , pp. 395-410
    • Sokalski, W.A.1
  • 28
    • 10344265555 scopus 로고    scopus 로고
    • Differential Transition-State Stabilization in Enzyme Catalysis: Quantum Chemical Analysis of Interactions in the Chorismate Mutase Reaction and Prediction of the Optimal Catalytic Field
    • Szefczyk, B.; Mulholland, A. J.; Ranaghan, K. E.; Sokalski, W. A. Differential Transition-State Stabilization in Enzyme Catalysis: Quantum Chemical Analysis of Interactions in the Chorismate Mutase Reaction and Prediction of the Optimal Catalytic Field J. Am. Chem. Soc. 2004, 126, 16148-16159
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 16148-16159
    • Szefczyk, B.1    Mulholland, A.J.2    Ranaghan, K.E.3    Sokalski, W.A.4
  • 29
    • 53049102903 scopus 로고    scopus 로고
    • Physical Nature of Intermolecular Interactions within cAMP-Dependent Protein Kinase Active Site: Differential Transition State Stabilization in Phosphoryl Transfer Reaction
    • Szarek, P.; Dyguda-Kazimierowicz, E.; Tachibana, A.; Sokalski, W. A. Physical Nature of Intermolecular Interactions within cAMP-Dependent Protein Kinase Active Site: Differential Transition State Stabilization in Phosphoryl Transfer Reaction J. Phys. Chem. B 2008, 112, 11819-11826
    • (2008) J. Phys. Chem. B , vol.112 , pp. 11819-11826
    • Szarek, P.1    Dyguda-Kazimierowicz, E.2    Tachibana, A.3    Sokalski, W.A.4
  • 30
    • 0001419507 scopus 로고
    • An Efficient Procedure for Decomposition of the SCF Interaction Energy into Components with Reduced Basis set Dependence
    • Sokalski, W. A.; Roszak, S.; Pecul, K. An Efficient Procedure for Decomposition of the SCF Interaction Energy into Components with Reduced Basis set Dependence Chem. Phys. Lett. 1988, 153, 153-159
    • (1988) Chem. Phys. Lett. , vol.153 , pp. 153-159
    • Sokalski, W.A.1    Roszak, S.2    Pecul, K.3
  • 32
    • 34347398645 scopus 로고    scopus 로고
    • Non-empirical Study of the Phosphorylation Reaction Catalyzed by 4-methyl-5-β-hydroxyethylthiazole Kinase: Relevance of the Theory of Intermolecular Interactions
    • Dyguda-Kazimierowicz, E.; Sokalski, W.; Leszczyński, J. Non-empirical Study of the Phosphorylation Reaction Catalyzed by 4-methyl-5-β-hydroxyethylthiazole Kinase: Relevance of the Theory of Intermolecular Interactions J. Mol. Model. 2007, 13, 839-849
    • (2007) J. Mol. Model. , vol.13 , pp. 839-849
    • Dyguda-Kazimierowicz, E.1    Sokalski, W.2    Leszczyński, J.3
  • 33
    • 84890021933 scopus 로고
    • The Calculation of Small Molecular Interactions by the Differences of Separate Total Energies. Some Procedures with Reduced Errors
    • Boys, S. F.; Bernardi, F. The Calculation of Small Molecular Interactions by the Differences of Separate Total Energies. Some Procedures with Reduced Errors Mol. Phys. 1970, 19, 553-566
    • (1970) Mol. Phys. , vol.19 , pp. 553-566
    • Boys, S.F.1    Bernardi, F.2
  • 40
    • 0034616816 scopus 로고    scopus 로고
    • Ab Initio Evaluation of the Potential Surface for General Base- Catalyzed Methanolysis of Formamide: A Reference Solution Reaction for Studies of Serine Proteases
    • Štrajbl, M.; Florián, J.; Warshel, A. Ab Initio Evaluation of the Potential Surface for General Base- Catalyzed Methanolysis of Formamide: A Reference Solution Reaction for Studies of Serine Proteases J. Am. Chem. Soc. 2000, 122, 5354-5366
    • (2000) J. Am. Chem. Soc. , vol.122 , pp. 5354-5366
    • Štrajbl, M.1    Florián, J.2    Warshel, A.3
  • 42
    • 37349122437 scopus 로고    scopus 로고
    • Identification of Productive Inhibitor Binding Orientation in Fatty Acid Amide Hydrolase (FAAH) by QM/MM Mechanistic Modelling
    • Lodola, A.; Mor, M.; Rivara, S.; Christov, C.; Tarzia, G.; Piomelli, D.; Mulholland, A. J. Identification of Productive Inhibitor Binding Orientation in Fatty Acid Amide Hydrolase (FAAH) by QM/MM Mechanistic Modelling Chem. Commun. 2008, 214-216
    • (2008) Chem. Commun. , pp. 214-216
    • Lodola, A.1    Mor, M.2    Rivara, S.3    Christov, C.4    Tarzia, G.5    Piomelli, D.6    Mulholland, A.J.7
  • 43
    • 33746301093 scopus 로고    scopus 로고
    • Synthesis and Structure-Activity Relationships of FAAH Inhibitors: Cyclohexylcarbamic Acid Biphenyl Esters with Chemical Modulation at the Proximal Phenyl Ring
    • Tarzia, G.; Duranti, A.; Gatti, G.; Piersanti, G.; Tontini, A.; Rivara, S.; Lodola, A.; Plazzi, P. V.; Mor, M.; Kathuria, S. Synthesis and Structure-Activity Relationships of FAAH Inhibitors: Cyclohexylcarbamic Acid Biphenyl Esters with Chemical Modulation at the Proximal Phenyl Ring ChemMedChem 2006, 1, 130-139
    • (2006) ChemMedChem , vol.1 , pp. 130-139
    • Tarzia, G.1    Duranti, A.2    Gatti, G.3    Piersanti, G.4    Tontini, A.5    Rivara, S.6    Lodola, A.7    Plazzi, P.V.8    Mor, M.9    Kathuria, S.10
  • 44
    • 27744466783 scopus 로고    scopus 로고
    • Mechanism of Carbamate Inactivation of FAAH: Implications for the Design of Covalent Inhibitors and in Vivo Functional Probes for Enzymes
    • Alexander, J. P.; Cravatt, B. F. Mechanism of Carbamate Inactivation of FAAH: Implications for the Design of Covalent Inhibitors and In Vivo Functional Probes for Enzymes Chem Biol 2005, 12, 1179-1187
    • (2005) Chem Biol , vol.12 , pp. 1179-1187
    • Alexander, J.P.1    Cravatt, B.F.2


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