-
2
-
-
0032930797
-
Assembly and analysis of conical models for the HIV-1 core
-
Ganser BK, Li S, Klishko VY, Finch JT, Sundquist WI, (1999) Assembly and analysis of conical models for the HIV-1 core. Science 283: 80-83.
-
(1999)
Science
, vol.283
, pp. 80-83
-
-
Ganser, B.K.1
Li, S.2
Klishko, V.Y.3
Finch, J.T.4
Sundquist, W.I.5
-
3
-
-
0037388765
-
Structural organization of authentic, mature HIV-1 virions and cores
-
Briggs JA, Wilk T, Welker R, Krausslich HG, Fuller SD, (2003) Structural organization of authentic, mature HIV-1 virions and cores. EMBO J 22: 1707-1715.
-
(2003)
EMBO J
, vol.22
, pp. 1707-1715
-
-
Briggs, J.A.1
Wilk, T.2
Welker, R.3
Krausslich, H.G.4
Fuller, S.D.5
-
4
-
-
0033106192
-
Head-to-tail dimers and interdomain flexibility revealed by the crystal structure of HIV-1 capsid protein (p24) complexed with a monoclonal antibody Fab
-
Berthet-Colominas C, Monaco S, Novelli A, Sibai G, Mallet F, et al. (1999) Head-to-tail dimers and interdomain flexibility revealed by the crystal structure of HIV-1 capsid protein (p24) complexed with a monoclonal antibody Fab. EMBO J 18: 1124-1136.
-
(1999)
EMBO J
, vol.18
, pp. 1124-1136
-
-
Berthet-Colominas, C.1
Monaco, S.2
Novelli, A.3
Sibai, G.4
Mallet, F.5
-
5
-
-
67549109069
-
X-ray structures of the hexameric building block of the HIV capsid
-
Pornillos O, Ganser-Pornillos BK, Kelly BN, Hua Y, Whitby FG, et al. (2009) X-ray structures of the hexameric building block of the HIV capsid. Cell 137: 1282-1292.
-
(2009)
Cell
, vol.137
, pp. 1282-1292
-
-
Pornillos, O.1
Ganser-Pornillos, B.K.2
Kelly, B.N.3
Hua, Y.4
Whitby, F.G.5
-
6
-
-
0036094824
-
Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication
-
Forshey BM, von Schwedler U, Sundquist WI, Aiken C, (2002) Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication. J Virol 76: 5667-5677.
-
(2002)
J Virol
, vol.76
, pp. 5667-5677
-
-
Forshey, B.M.1
von Schwedler, U.2
Sundquist, W.I.3
Aiken, C.4
-
7
-
-
0037404501
-
Functional surfaces of the human immunodeficiency virus type 1 capsid protein
-
von Schwedler UK, Stray KM, Garrus JE, Sundquist WI, (2003) Functional surfaces of the human immunodeficiency virus type 1 capsid protein. J Virol 77: 5439-5450.
-
(2003)
J Virol
, vol.77
, pp. 5439-5450
-
-
von Schwedler, U.K.1
Stray, K.M.2
Garrus, J.E.3
Sundquist, W.I.4
-
8
-
-
57649116079
-
Residues in the HIV-1 capsid assembly inhibitor binding site are essential for maintaining the assembly-competent quaternary structure of the capsid protein
-
Bartonova V, Igonet S, Sticht J, Glass B, Habermann A, et al. (2008) Residues in the HIV-1 capsid assembly inhibitor binding site are essential for maintaining the assembly-competent quaternary structure of the capsid protein. J Biol Chem 283: 32024-32033.
-
(2008)
J Biol Chem
, vol.283
, pp. 32024-32033
-
-
Bartonova, V.1
Igonet, S.2
Sticht, J.3
Glass, B.4
Habermann, A.5
-
9
-
-
0034855639
-
Human immunodeficiency virus type 1 N-terminal capsid mutants that exhibit aberrant core morphology and are blocked in initiation of reverse transcription in infected cells
-
Tang S, Murakami T, Agresta BE, Campbell S, Freed EO, et al. (2001) Human immunodeficiency virus type 1 N-terminal capsid mutants that exhibit aberrant core morphology and are blocked in initiation of reverse transcription in infected cells. J Virol 75: 9357-9366.
-
(2001)
J Virol
, vol.75
, pp. 9357-9366
-
-
Tang, S.1
Murakami, T.2
Agresta, B.E.3
Campbell, S.4
Freed, E.O.5
-
11
-
-
0028337166
-
Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome
-
Koup RA, Safrit JT, Cao Y, Andrews CA, McLeod G, et al. (1994) Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome. J Virol 68: 4650-4655.
-
(1994)
J Virol
, vol.68
, pp. 4650-4655
-
-
Koup, R.A.1
Safrit, J.T.2
Cao, Y.3
Andrews, C.A.4
McLeod, G.5
-
12
-
-
33846101731
-
CD8+ T-cell responses to different HIV proteins have discordant associations with viral load
-
Kiepiela P, Ngumbela K, Thobakgale C, Ramduth D, Honeyborne I, et al. (2007) CD8+ T-cell responses to different HIV proteins have discordant associations with viral load. Nat Med 13: 46-53.
-
(2007)
Nat Med
, vol.13
, pp. 46-53
-
-
Kiepiela, P.1
Ngumbela, K.2
Thobakgale, C.3
Ramduth, D.4
Honeyborne, I.5
-
13
-
-
33748919693
-
Selection on the human immunodeficiency virus type 1 proteome following primary infection
-
Liu Y, McNevin J, Cao J, Zhao H, Genowati I, et al. (2006) Selection on the human immunodeficiency virus type 1 proteome following primary infection. J Virol 80: 9519-9529.
-
(2006)
J Virol
, vol.80
, pp. 9519-9529
-
-
Liu, Y.1
McNevin, J.2
Cao, J.3
Zhao, H.4
Genowati, I.5
-
14
-
-
27144513224
-
Selective escape from CD8+ T-cell responses represents a major driving force of human immunodeficiency virus type 1 (HIV-1) sequence diversity and reveals constraints on HIV-1 evolution
-
Allen TM, Altfeld M, Geer SC, Kalife ET, Moore C, et al. (2005) Selective escape from CD8+ T-cell responses represents a major driving force of human immunodeficiency virus type 1 (HIV-1) sequence diversity and reveals constraints on HIV-1 evolution. J Virol 79: 13239-13249.
-
(2005)
J Virol
, vol.79
, pp. 13239-13249
-
-
Allen, T.M.1
Altfeld, M.2
Geer, S.C.3
Kalife, E.T.4
Moore, C.5
-
16
-
-
84855396595
-
CTL responses of high functional avidity and broad variant cross-reactivity are associated with HIV control
-
Mothe B, Llano A, Ibarrondo J, Zamarreno J, Schiaulini M, et al. (2012) CTL responses of high functional avidity and broad variant cross-reactivity are associated with HIV control. PLoS ONE 7: e29717.
-
(2012)
PLoS ONE
, vol.7
-
-
Mothe, B.1
Llano, A.2
Ibarrondo, J.3
Zamarreno, J.4
Schiaulini, M.5
-
19
-
-
0037423791
-
Consensus and ancestral state HIV vaccines
-
author reply 1515-1518
-
Nickle DC, Jensen MA, Gottlieb GS, Shriner D, Learn GH, et al. (2003) Consensus and ancestral state HIV vaccines. Science 299: 1515-1518; author reply 1515-1518.
-
(2003)
Science
, vol.299
, pp. 1515-1518
-
-
Nickle, D.C.1
Jensen, M.A.2
Gottlieb, G.S.3
Shriner, D.4
Learn, G.H.5
-
20
-
-
77954067056
-
DIVEIN: A Web Server to Analyze Phylogenies, Sequence Divergence, Diversity, and Informative Sites
-
Deng W, Maust BS, Nickle DC, Learn GH, Liu Y, et al. (2010) DIVEIN: A Web Server to Analyze Phylogenies, Sequence Divergence, Diversity, and Informative Sites. Biotechniques 48: 405-408.
-
(2010)
Biotechniques
, vol.48
, pp. 405-408
-
-
Deng, W.1
Maust, B.S.2
Nickle, D.C.3
Learn, G.H.4
Liu, Y.5
-
21
-
-
33847254313
-
Granulocyte-monocyte colony-stimulating factor upregulates HIV-1 replication in monocyte-derived macrophages cultured at low density
-
McClure J, van't Wout AB, Tran T, Mittler JE, (2007) Granulocyte-monocyte colony-stimulating factor upregulates HIV-1 replication in monocyte-derived macrophages cultured at low density. J Acquir Immune Defic Syndr 44: 254-261.
-
(2007)
J Acquir Immune Defic Syndr
, vol.44
, pp. 254-261
-
-
McClure, J.1
van't Wout, A.B.2
Tran, T.3
Mittler, J.E.4
-
22
-
-
33745158157
-
A simple method of estimating fifty percent endpoints
-
Reed LJ, Muench H, (1938) A simple method of estimating fifty percent endpoints. Am J Hyg 27: 493-497.
-
(1938)
Am J Hyg
, vol.27
, pp. 493-497
-
-
Reed, L.J.1
Muench, H.2
-
23
-
-
84857959077
-
Variable fitness impact of HIV-1 escape mutations to cytotoxic T lymphocyte (CTL) response
-
Troyer RM, McNevin J, Liu Y, Zhang SC, Krizan RW, et al. (2009) Variable fitness impact of HIV-1 escape mutations to cytotoxic T lymphocyte (CTL) response. PLoS Pathog 5: e1000365.
-
(2009)
PLoS Pathog
, vol.5
-
-
Troyer, R.M.1
McNevin, J.2
Liu, Y.3
Zhang, S.C.4
Krizan, R.W.5
-
24
-
-
84878978771
-
A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture
-
In Press
-
Liu Y, Mullins JI,etal (2012) A sensitive real-time PCR based assay to estimate the impact of amino acid substitutions on the competitive replication fitness of human immunodeficiency virus type 1 in cell culture. Journal of Virological Methods: In Press.
-
(2012)
Journal of Virological Methods
-
-
Liu, Y.1
Mullins, J.I.2
-
25
-
-
77952261538
-
vFitness: a web-based computing tool for improving estimation of in vitro HIV-1 fitness experiments
-
Ma J, Dykes C, Wu T, Huang Y, Demeter L, et al. (2010) vFitness: a web-based computing tool for improving estimation of in vitro HIV-1 fitness experiments. BMC Bioinformatics 11: 261.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 261
-
-
Ma, J.1
Dykes, C.2
Wu, T.3
Huang, Y.4
Demeter, L.5
-
26
-
-
33144469071
-
Modeling and estimation of replication fitness of human immunodeficiency virus type 1 in vitro experiments by using a growth competition assay
-
Wu H, Huang Y, Dykes C, Liu D, Ma J, et al. (2006) Modeling and estimation of replication fitness of human immunodeficiency virus type 1 in vitro experiments by using a growth competition assay. J Virol 80: 2380-2389.
-
(2006)
J Virol
, vol.80
, pp. 2380-2389
-
-
Wu, H.1
Huang, Y.2
Dykes, C.3
Liu, D.4
Ma, J.5
-
27
-
-
34547811379
-
Reconstruction and function of ancestral center-of-tree human immunodeficiency virus type 1 proteins
-
Rolland M, Jensen MA, Nickle DC, Yan J, Learn GH, et al. (2007) Reconstruction and function of ancestral center-of-tree human immunodeficiency virus type 1 proteins. J Virol 81: 8507-8514.
-
(2007)
J Virol
, vol.81
, pp. 8507-8514
-
-
Rolland, M.1
Jensen, M.A.2
Nickle, D.C.3
Yan, J.4
Learn, G.H.5
-
28
-
-
57149090493
-
Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag
-
Carlson JM, Brumme ZL, Rousseau CM, Brumme CJ, Matthews P, et al. (2008) Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag. PLoS Comput Biol 4: e1000225.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Carlson, J.M.1
Brumme, Z.L.2
Rousseau, C.M.3
Brumme, C.J.4
Matthews, P.5
-
30
-
-
84857658242
-
A structural model for the generation of continuous curvature on the surface of a retroviral capsid
-
Bailey GD, Hyun JK, Mitra AK, Kingston RL, (2012) A structural model for the generation of continuous curvature on the surface of a retroviral capsid. J Mol Biol 417: 212-223.
-
(2012)
J Mol Biol
, vol.417
, pp. 212-223
-
-
Bailey, G.D.1
Hyun, J.K.2
Mitra, A.K.3
Kingston, R.L.4
-
31
-
-
84877321863
-
HIV-1 conserved elements vaccines: Relationship between sequence conservation and replicative capacity
-
Rolland M, Manocheewa S, Swain JV, Lanxon-Cookson EC, Kim M, et al. (2013) HIV-1 conserved elements vaccines: Relationship between sequence conservation and replicative capacity. J Virol.
-
(2013)
J Virol
-
-
Rolland, M.1
Manocheewa, S.2
Swain, J.V.3
Lanxon-Cookson, E.C.4
Kim, M.5
-
32
-
-
82755190463
-
Definition of the viral targets of protective HIV-1-specific T cell responses
-
Mothe B, Llano A, Ibarrondo J, Daniels M, Miranda C, et al. (2011) Definition of the viral targets of protective HIV-1-specific T cell responses. J Transl Med 9: 208.
-
(2011)
J Transl Med
, vol.9
, pp. 208
-
-
Mothe, B.1
Llano, A.2
Ibarrondo, J.3
Daniels, M.4
Miranda, C.5
-
33
-
-
79951812694
-
Preclinical evaluation of HIV-1 therapeutic ex vivo dendritic cell vaccines expressing consensus Gag antigens and conserved Gag epitopes
-
Niu L, Termini JM, Kanagavelu SK, Gupta S, Rolland MM, et al. (2011) Preclinical evaluation of HIV-1 therapeutic ex vivo dendritic cell vaccines expressing consensus Gag antigens and conserved Gag epitopes. Vaccine 29: 2110-2119.
-
(2011)
Vaccine
, vol.29
, pp. 2110-2119
-
-
Niu, L.1
Termini, J.M.2
Kanagavelu, S.K.3
Gupta, S.4
Rolland, M.M.5
|