메뉴 건너뛰기




Volumn 50, Issue 5, 2013, Pages 762-777

The genetic makeup of the drosophila piRNA pathway

Author keywords

[No Author keywords available]

Indexed keywords

PIWI INTERACTING RNA;

EID: 84878827621     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2013.04.031     Document Type: Article
Times cited : (169)

References (47)
  • 2
    • 33947273235 scopus 로고    scopus 로고
    • Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
    • Brennecke J., Aravin A.A., Stark A., Dus M., Kellis M., Sachidanandam R., Hannon G.J. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 2007, 128:1089-1103.
    • (2007) Cell , vol.128 , pp. 1089-1103
    • Brennecke, J.1    Aravin, A.A.2    Stark, A.3    Dus, M.4    Kellis, M.5    Sachidanandam, R.6    Hannon, G.J.7
  • 3
    • 34249804498 scopus 로고    scopus 로고
    • Using FlyAtlas to identify better Drosophila melanogaster models of human disease
    • Chintapalli V.R., Wang J., Dow J.A. Using FlyAtlas to identify better Drosophila melanogaster models of human disease. Nat. Genet. 2007, 39:715-720.
    • (2007) Nat. Genet. , vol.39 , pp. 715-720
    • Chintapalli, V.R.1    Wang, J.2    Dow, J.A.3
  • 4
    • 84878851966 scopus 로고    scopus 로고
    • A Transcriptome-wide RNAi Screen in the Drosophila Ovary Reveals Factors of the Germline piRNA Pathway
    • Published online June 6, 2013
    • Czech B., Preall J.B., McGinn J., Hannon G.J. A Transcriptome-wide RNAi Screen in the Drosophila Ovary Reveals Factors of the Germline piRNA Pathway. Mol. Cell 2013, 50. Published online June 6, 2013. 10.1016/j.molcel.2013.04.031.
    • (2013) Mol. Cell , vol.50
    • Czech, B.1    Preall, J.B.2    McGinn, J.3    Hannon, G.J.4
  • 6
    • 58449134534 scopus 로고    scopus 로고
    • Small silencing RNAs: an expanding universe
    • Ghildiyal M., Zamore P.D. Small silencing RNAs: an expanding universe. Nat. Rev. Genet. 2009, 10:94-108.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 94-108
    • Ghildiyal, M.1    Zamore, P.D.2
  • 7
    • 2442458847 scopus 로고    scopus 로고
    • Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31
    • Groth A.C., Fish M., Nusse R., Calos M.P. Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31. Genetics 2004, 166:1775-1782.
    • (2004) Genetics , vol.166 , pp. 1775-1782
    • Groth, A.C.1    Fish, M.2    Nusse, R.3    Calos, M.P.4
  • 10
    • 84860389782 scopus 로고    scopus 로고
    • A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors
    • Handler D., Olivieri D., Novatchkova M., Gruber F.S., Meixner K., Mechtler K., Stark A., Sachidanandam R., Brennecke J. A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. EMBO J. 2011, 30:3977-3993.
    • (2011) EMBO J. , vol.30 , pp. 3977-3993
    • Handler, D.1    Olivieri, D.2    Novatchkova, M.3    Gruber, F.S.4    Meixner, K.5    Mechtler, K.6    Stark, A.7    Sachidanandam, R.8    Brennecke, J.9
  • 11
    • 34447291602 scopus 로고    scopus 로고
    • The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC
    • Horwich M.D., Li C., Matranga C., Vagin V., Farley G., Wang P., Zamore P.D. The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC. Curr. Biol. 2007, 17:1265-1272.
    • (2007) Curr. Biol. , vol.17 , pp. 1265-1272
    • Horwich, M.D.1    Li, C.2    Matranga, C.3    Vagin, V.4    Farley, G.5    Wang, P.6    Zamore, P.D.7
  • 13
    • 84868613084 scopus 로고    scopus 로고
    • The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis
    • Ipsaro J.J., Haase A.D., Knott S.R., Joshua-Tor L., Hannon G.J. The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis. Nature 2012, 491:279-283.
    • (2012) Nature , vol.491 , pp. 279-283
    • Ipsaro, J.J.1    Haase, A.D.2    Knott, S.R.3    Joshua-Tor, L.4    Hannon, G.J.5
  • 14
    • 82255185567 scopus 로고    scopus 로고
    • Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing
    • Jayaprakash A.D., Jabado O., Brown B.D., Sachidanandam R. Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing. Nucleic Acids Res. 2011, 39:e141.
    • (2011) Nucleic Acids Res. , vol.39
    • Jayaprakash, A.D.1    Jabado, O.2    Brown, B.D.3    Sachidanandam, R.4
  • 16
    • 33845741236 scopus 로고    scopus 로고
    • Drosophila rasiRNA pathway mutations disrupt embryonic axis specification through activation of an ATR/Chk2 DNA damage response
    • Klattenhoff C., Bratu D.P., McGinnis-Schultz N., Koppetsch B.S., Cook H.A., Theurkauf W.E. Drosophila rasiRNA pathway mutations disrupt embryonic axis specification through activation of an ATR/Chk2 DNA damage response. Dev. Cell 2007, 12:45-55.
    • (2007) Dev. Cell , vol.12 , pp. 45-55
    • Klattenhoff, C.1    Bratu, D.P.2    McGinnis-Schultz, N.3    Koppetsch, B.S.4    Cook, H.A.5    Theurkauf, W.E.6
  • 17
    • 69249225196 scopus 로고    scopus 로고
    • The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters
    • Klattenhoff C., Xi H., Li C., Lee S., Xu J., Khurana J.S., Zhang F., Schultz N., Koppetsch B.S., Nowosielska A., et al. The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters. Cell 2009, 138:1137-1149.
    • (2009) Cell , vol.138 , pp. 1137-1149
    • Klattenhoff, C.1    Xi, H.2    Li, C.3    Lee, S.4    Xu, J.5    Khurana, J.S.6    Zhang, F.7    Schultz, N.8    Koppetsch, B.S.9    Nowosielska, A.10
  • 19
    • 80051997952 scopus 로고    scopus 로고
    • Dynamic interactions between transposable elements and their hosts
    • Levin H.L., Moran J.V. Dynamic interactions between transposable elements and their hosts. Nat. Rev. Genet. 2011, 12:615-627.
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 615-627
    • Levin, H.L.1    Moran, J.V.2
  • 22
    • 60149098474 scopus 로고    scopus 로고
    • Small RNAs as guardians of the genome
    • Malone C.D., Hannon G.J. Small RNAs as guardians of the genome. Cell 2009, 136:656-668.
    • (2009) Cell , vol.136 , pp. 656-668
    • Malone, C.D.1    Hannon, G.J.2
  • 25
    • 33750811890 scopus 로고    scopus 로고
    • Establishment of stable cell lines of Drosophila germ-line stem cells
    • Niki Y., Yamaguchi T., Mahowald A.P. Establishment of stable cell lines of Drosophila germ-line stem cells. Proc. Natl. Acad. Sci. USA 2006, 103:16325-16330.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 16325-16330
    • Niki, Y.1    Yamaguchi, T.2    Mahowald, A.P.3
  • 28
    • 77957793321 scopus 로고    scopus 로고
    • An invivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila
    • Olivieri D., Sykora M.M., Sachidanandam R., Mechtler K., Brennecke J. An invivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila. EMBO J. 2010, 29:3301-3317.
    • (2010) EMBO J. , vol.29 , pp. 3301-3317
    • Olivieri, D.1    Sykora, M.M.2    Sachidanandam, R.3    Mechtler, K.4    Brennecke, J.5
  • 29
    • 84866864333 scopus 로고    scopus 로고
    • The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila
    • Olivieri D., Senti K.A., Subramanian S., Sachidanandam R., Brennecke J. The cochaperone shutdown defines a group of biogenesis factors essential for all piRNA populations in Drosophila. Mol. Cell 2012, 47:954-969.
    • (2012) Mol. Cell , vol.47 , pp. 954-969
    • Olivieri, D.1    Senti, K.A.2    Subramanian, S.3    Sachidanandam, R.4    Brennecke, J.5
  • 30
    • 81255137997 scopus 로고    scopus 로고
    • The Cutoff protein regulates piRNA cluster expression and piRNA production in the Drosophila germline
    • Pane A., Jiang P., Zhao D.Y., Singh M., Schüpbach T. The Cutoff protein regulates piRNA cluster expression and piRNA production in the Drosophila germline. EMBO J. 2011, 30:4601-4615.
    • (2011) EMBO J. , vol.30 , pp. 4601-4615
    • Pane, A.1    Jiang, P.2    Zhao, D.Y.3    Singh, M.4    Schüpbach, T.5
  • 31
    • 84864042164 scopus 로고    scopus 로고
    • Shutdown is a component of the Drosophila piRNA biogenesis machinery
    • Preall J.B., Czech B., Guzzardo P.M., Muerdter F., Hannon G.J. shutdown is a component of the Drosophila piRNA biogenesis machinery. RNA 2012, 18:1446-1457.
    • (2012) RNA , vol.18 , pp. 1446-1457
    • Preall, J.B.1    Czech, B.2    Guzzardo, P.M.3    Muerdter, F.4    Hannon, G.J.5
  • 32
    • 79952792594 scopus 로고    scopus 로고
    • The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells
    • Qi H., Watanabe T., Ku H.Y., Liu N., Zhong M., Lin H. The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells. J.Biol. Chem. 2011, 286:3789-3797.
    • (2011) J.Biol. Chem. , vol.286 , pp. 3789-3797
    • Qi, H.1    Watanabe, T.2    Ku, H.Y.3    Liu, N.4    Zhong, M.5    Lin, H.6
  • 33
    • 84874240831 scopus 로고    scopus 로고
    • Multiple roles for Piwi in silencing Drosophila transposons
    • Rozhkov N.V., Hammell M., Hannon G.J. Multiple roles for Piwi in silencing Drosophila transposons. Genes Dev. 2013, 27:400-412.
    • (2013) Genes Dev. , vol.27 , pp. 400-412
    • Rozhkov, N.V.1    Hammell, M.2    Hannon, G.J.3
  • 36
    • 1942453393 scopus 로고    scopus 로고
    • Evidence for a piwi-dependent RNA silencing of the gypsy endogenous retrovirus by the Drosophila melanogaster flamenco gene
    • Sarot E., Payen-Groschêne G., Bucheton A., Pélisson A. Evidence for a piwi-dependent RNA silencing of the gypsy endogenous retrovirus by the Drosophila melanogaster flamenco gene. Genetics 2004, 166:1313-1321.
    • (2004) Genetics , vol.166 , pp. 1313-1321
    • Sarot, E.1    Payen-Groschêne, G.2    Bucheton, A.3    Pélisson, A.4
  • 37
    • 78149481868 scopus 로고    scopus 로고
    • The piRNA pathway: a fly's perspective on the guardian of the genome
    • Senti K.A., Brennecke J. The piRNA pathway: a fly's perspective on the guardian of the genome. Trends Genet. 2010, 26:499-509.
    • (2010) Trends Genet. , vol.26 , pp. 499-509
    • Senti, K.A.1    Brennecke, J.2
  • 38
    • 84870060785 scopus 로고    scopus 로고
    • Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression
    • Sienski G., Dönertas D., Brennecke J. Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression. Cell 2012, 151:964-980.
    • (2012) Cell , vol.151 , pp. 964-980
    • Sienski, G.1    Dönertas, D.2    Brennecke, J.3
  • 39
    • 5444225805 scopus 로고    scopus 로고
    • Elongation by RNA polymerase II: the short and long of it
    • Sims R.J., Belotserkovskaya R., Reinberg D. Elongation by RNA polymerase II: the short and long of it. Genes Dev. 2004, 18:2437-2468.
    • (2004) Genes Dev. , vol.18 , pp. 2437-2468
    • Sims, R.J.1    Belotserkovskaya, R.2    Reinberg, D.3
  • 41
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin R.K., Martienssen R. Transposable elements and the epigenetic regulation of the genome. Nat. Rev. Genet. 2007, 8:272-285.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 43
    • 66149145780 scopus 로고    scopus 로고
    • The Yb protein defines a novel organelle and regulates male germline stem cell self-renewal in Drosophila melanogaster
    • Szakmary A., Reedy M., Qi H., Lin H. The Yb protein defines a novel organelle and regulates male germline stem cell self-renewal in Drosophila melanogaster. J.Cell Biol. 2009, 185:613-627.
    • (2009) J.Cell Biol. , vol.185 , pp. 613-627
    • Szakmary, A.1    Reedy, M.2    Qi, H.3    Lin, H.4
  • 44
    • 2342540912 scopus 로고    scopus 로고
    • The ever-increasing complexities of the exon junction complex
    • Tange T.O., Nott A., Moore M.J. The ever-increasing complexities of the exon junction complex. Curr. Opin. Cell Biol. 2004, 16:279-284.
    • (2004) Curr. Opin. Cell Biol. , vol.16 , pp. 279-284
    • Tange, T.O.1    Nott, A.2    Moore, M.J.3
  • 45
    • 84862907807 scopus 로고    scopus 로고
    • Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line
    • Wang S.H., Elgin S.C. Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line. Proc. Natl. Acad. Sci. USA 2011, 108:21164-21169.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 21164-21169
    • Wang, S.H.1    Elgin, S.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.