The intracellular galactoglycome in Trichoderma reesei during growth on lactose

Applied Microbiology and Biotechnology

Volumn 97, Issue 12, 2013, Pages 5447-5456

  Karaffa, Levente ^a   Coulier, Leon ^b   Fekete, Erzsébet ^a   Overkamp, Karin M ^b   Druzhinina, Irina S ^c   Mikus, Marianna ^c   Seiboth, Bernhard ^c   Novák, Levente ^a   Punt, Peter J ^b   Kubicek, Christian P ^c  

^a UNIVERSITY OF DEBRECEN   (Hungary)

^b TNO   (Netherlands)

^c VIENNA UNIVERSITY OF TECHNOLOGY   (Austria)

Author keywords

Cellulase; Galactoglycome; HPAEC MS; Lactose; Trichoderma reesei

Indexed keywords

CELLULASE; GALACTOGLYCOME; HPAEC-MS; LACTOSE; TRICHODERMA REESEI;

BIOLOGY; BIOTECHNOLOGY;

OLIGOSACCHARIDES;

CELLULASE; DISACCHARIDE; GALACTOGLYCOME; GALACTOSE; GLUCOSE; GLYCOSYLTRANSFERASE; HEXOSE; LACTOSE; LACTULOSE; OLIGOSACCHARIDE; TRISACCHARIDE; UNCLASSIFIED DRUG;

ACCUMULATION; BIOFUEL; CATABOLISM; DISACCHARIDE; FUNGUS; GLUCOSE; ION EXCHANGE;

ANION EXCHANGE CHROMATOGRAPHY; ARTICLE; CATABOLISM; FUNGUS GROWTH; GLYCOSYLATION; HYPOCREA JECORINA; MASS SPECTROMETRY; NONHUMAN;

CELLULASE; CHROMATOGRAPHY, ION EXCHANGE; GALACTOSE; LACTOSE; MASS SPECTROMETRY; OLIGOSACCHARIDES; TRICHODERMA;

HYPOCREA JECORINA;

EID: 84878693435     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-012-4667-y     Document Type: Article

References (28)

1. Bruggink C, Maurer R, Herrmann H, Cavalli S, Hoefler FJ (2005) Analysis of carbohydrates by anion exchange chromatography and mass spectrometry. J Chromatography A 1085:104-109
2. Bucior I, Burger MM (2004) Carbohydrate-carbohydrate interaction as a major force initiating cell-cell recognition. Glycoconj J 21:111-123
3. Coulier L, Timmermans J, Richard B, Van Den Dool R, Haaksman I, Klarenbeek B, Slaghek T, Van Dongen WJ (2009) In-depth characterization of prebiotic galacto-oligosaccharides by a combination of analytical techniques. J Agr Food Chem 57:8488-8495
4. Eveleigh DE, Montenecourt BS (1979) Increasing yields of extracellular enzymes. Adv Appl Microbiol 25:57-74
5. Fekete E, Seiboth B, Kubicek CP, Szentirmai A, Karaffa L (2008) Lack of aldose 1-epimerase in Hypocrea jecorina (anamorph Trichoderma reesei): a key to cellulase gene expression on lactose. Proc Natl Acad Sci USA 105:7141-7146
6. Hartl L, Kubicek CP, Seiboth B (2007) Induction of the gal pathway and cellulase genes involves no transcriptional inducer function of the galactokinase in Hypocrea jecorina. J Biol Chem 282:18654-18659
7. Jörgensen RG, Mäder P, Fließbach A (2010) Long-term effects of organic farming on fungal and bacterial residues in relation to microbial energy metabolism. Biol Fert Soils 46:303-307
8. Karaffa L, Fekete E, Gamauf C, Szentirmai A, Kubicek CP, Seiboth B (2006) D-Galactose induces cellulase gene expression in Hypocrea jecorina at low growth rates. Microbiology 152:1507-1514
9. Lairson LL, Henrissat B, Davies GJ, Withers SG (2008) Glycosyltransferases: structures, functions, and mechanisms. Annu Rev Biochem 77:521-55
10. Lamsal BP (2012) Production, health aspects and potential food uses of dairy prebiotic galactooligosaccharides. J Sci Food Agr 92:2020-2028
11. Le Crom S, Schackwitz W, Penacchio L, Magnuson J, Culley D, Collet J, Martin J, Druzhinina IS, Mathis H, Monot F, Seiboth B, Cherry B, Rey M, Berka R, Kubicek CP, Baker SE, Margeot A (2009) Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing. Proc Natl Acad Sci USA 106:16151-16156
12. Lu L, Xu S, Jin L, Zhang D, Li Y, Xiao M (2012) Synthesis of galactosyl sucralose by β-galactosidase from Lactobacillus bulgaricus L3. Food Chem 134:269-275
13. Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EG, Grigoriev IV, Harris P, Jackson M, Kubicek CP, Han CS, Ho I, Larrondo LF, de Leon AL, Magnuson JK, Merino S, Misra M, Nelson B, Putnam N, Robbertse B, Salamov AA, Schmoll M, Terry A, Thayer N, Westerholm-Parvinen A, Schoch CL, Yao J, Barabote R, Nelson MA, Detter C, Bruce D, Kuske CR, Xie G, Richardson P, Rokhsar DS, Lucas SM, Rubin EM, Dunn-Coleman N, Ward M, Brettin TS (2008) Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nat Biotechnol 26:553-560
14. Menon V, Rao M (2012) Trends in bioconversion of lignocellulose: biofuels, platform chemicals & biorefinery concept. Prog Energy Comb Sci 38:522-550
15. Nagai A, Yamamoto T, Wariishi H (2012) Identification of fructo- and malto-oligosaccharides in cured tobacco leaves (Nicotiana tabacum). J Agri Food Chem 60:6606-6612
16. Okatch H, Torto N, Armateifio J (2003) Characterisation of legumes by enzymatic hydrolysis, microdialysis sampling, and micro-high-performance anion-exchange chromatography with electrospray ionization mass spectrometry. J Chromatography A 992:67-74
17. Prasad S, Roy I (2010) Effect of disaccharides on the stabilization of bovine trypsin against detergent and autolysis. Biotechnol Prog 26:627-635
18. Richardson S, Cohen A, Gorton L (2001) High-performance chromatography-electrospray mass spectrometry for investigation of the substituent distribution in hydroxypropylated potato amylopectin starch. J Chromatography A 917:111-121
19. Rodriguez-Fernandez M, Cardelle-Cobas A, Villamiel M, Banga JR (2011) Detailed kinetic model describing new oligosaccharides synthesis using different β-galactosidases. J Biotechnol 153:116-124
20. Roelfsema WA, Kuster BFM, Heslinga MC, Pluim H, Verhage M (2010) Lactose and derivatives. Ullmann's encyclopedia of industrial chemistry, 7th edn. Wiley, New York
21. Rodgers JL, Nicewander WA (1988) Thirteen ways to look at the correlation coefficient. American Stat 42:59-66
22. Röhr M, Zehentgruber O, Kubicek CP (1981) Kinetics of biomass formation and citric acid production by Aspergillus niger on a pilot plant scale. Biotechnol Bioeng 23:2433-2445
23. Ruijter GJG, Visser J (1996) Determination of intermediary metabolites in Aspergillus niger. J Microbiol Methods 25:295-302
24. Rumbold K, Okatch H, Torto N, Siika-Aho M, Gubitz G, Robra K-H, Prior B (2002) Monitoring on-line desalted lignocellulosic hydrolysates by microdialysis sampling micro-high performance anion exchange chromatography with integrated pulsed electrochemical detection/mass spectrometry. Biotechnol Bioeng 78:822-828
25. Sangwan V, Tomar SK, Singh RRB, Singh AK, Ali B (2011) Galactooligosaccharides: novel components of designer foods. J Food Sci 76:R103-R111
26. Seiboth B, Hartl L, Pail M, Fekete E, Karaffa L, Kubicek CP (2004) The galactokinase of Hypocrea jecorina is essential for cellulase induction by lactose but dispensable for growth on D-galactose. Mol Microbiol 51:1015-1025
27. Seiboth B, Gamauf C, Pail M, Hartl L, Kubicek CP (2007) The D-xylose reductase of Hypocrea jecorina is the major aldose reductase in pentose and D-galactose catabolism and necessary for β-galactosidase and cellulase induction by lactose. Mol Microbiol 66:890-900
28. Soper DS (2012) p-value calculator for correlation coefficients (online software). http://www.danielsoper.com/statcalc3