-
1
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
doi:10.1126/science.1178811
-
Boch J, Scholze H, Schornack S, Landgraf A, Hahn S, Kay S, Lahaye T, Nickstadt A, Bonas U (2009) Breaking the code of DNA binding specificity of TAL-type III effectors. Science 326(5959): 1509-1512. doi: 10. 1126/science. 1178811.
-
(2009)
Science
, vol.326
, Issue.5959
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
2
-
-
79960064013
-
Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting
-
doi:10.1093/nar/gkr218
-
Cermak T, Doyle EL, Christian M, Wang L, Zhang Y, Schmidt C, Baller JA, Somia NV, Bogdanove AJ, Voytas DF (2011) Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting. Nucleic Acids Res 39(12): e82. doi: 10. 1093/nar/gkr218.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.12
-
-
Cermak, T.1
Doyle, E.L.2
Christian, M.3
Wang, L.4
Zhang, Y.5
Schmidt, C.6
Baller, J.A.7
Somia, N.V.8
Bogdanove, A.J.9
Voytas, D.F.10
-
3
-
-
84873729095
-
Multiplex genome engineering using CRISPR/Cas systems
-
doi:10.1126/science.1231143
-
Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, Hsu PD, Wu X, Jiang W, Marraffini LA, Zhang F (2013) Multiplex genome engineering using CRISPR/Cas systems. Science 339(6121): 819-823. doi: 10. 1126/science. 1231143.
-
(2013)
Science
, vol.339
, Issue.6121
, pp. 819-823
-
-
Cong, L.1
Ran, F.A.2
Cox, D.3
Lin, S.4
Barretto, R.5
Habib, N.6
Hsu, P.D.7
Wu, X.8
Jiang, W.9
Marraffini, L.A.10
Zhang, F.11
-
4
-
-
70349103842
-
ZFN-induced mutagenesis and gene-targeting in Arabidopsis through Agrobacterium-mediated floral dip transformation
-
doi:10.1111/j.1467-7652.2009.00446.x
-
de Pater S, Neuteboom LW, Pinas JE, Hooykaas PJ, van der Zaal BJ (2009) ZFN-induced mutagenesis and gene-targeting in Arabidopsis through Agrobacterium-mediated floral dip transformation. Plant Biotechnol J 7(8): 821-835. doi: 10. 1111/j. 1467-7652. 2009. 00446. x.
-
(2009)
Plant Biotechnol J
, vol.7
, Issue.8
, pp. 821-835
-
-
de Pater, S.1
Neuteboom, L.W.2
Pinas, J.E.3
Hooykaas, P.J.4
van der Zaal, B.J.5
-
5
-
-
0027401045
-
Use of a zinc-finger consensus sequence framework and specificity rules to design specific DNA binding proteins
-
Desjarlais JR, Berg JM (1993) Use of a zinc-finger consensus sequence framework and specificity rules to design specific DNA binding proteins. Proc Natl Acad Sci U S A 90(6): 2256-2260.
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, Issue.6
, pp. 2256-2260
-
-
Desjarlais, J.R.1
Berg, J.M.2
-
6
-
-
84864475122
-
TAL effector-nucleotide targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction
-
doi:10.1093/nar/gks608
-
Doyle EL, Booher NJ, Standage DS, Voytas DF, Brendel VP, VanDyk JK, Bogdanove AJ (2012) TAL effector-nucleotide targeter (TALE-NT) 2. 0: tools for TAL effector design and target prediction. Nucleic Acids Res 40(W1): W117-W122. doi: 10. 1093/nar/gks608.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.W1
-
-
Doyle, E.L.1
Booher, N.J.2
Standage, D.S.3
Voytas, D.F.4
Brendel, V.P.5
VanDyk, J.K.6
Bogdanove, A.J.7
-
7
-
-
82355181082
-
Localized egg-cell expression of effector proteins for targeted modification of the Arabidopsis genome
-
doi:10.1111/j.1365-313X.2011.04741.x
-
Even-Faitelson L, Samach A, Melamed-Bessudo C, Avivi-Ragolsky N, Levy AA (2011) Localized egg-cell expression of effector proteins for targeted modification of the Arabidopsis genome. Plant J 68(5): 929-937. doi: 10. 1111/j. 1365-313X. 2011. 04741. x.
-
(2011)
Plant J
, vol.68
, Issue.5
, pp. 929-937
-
-
Even-Faitelson, L.1
Samach, A.2
Melamed-Bessudo, C.3
Avivi-Ragolsky, N.4
Levy, A.A.5
-
8
-
-
84860788027
-
In planta gene targeting
-
doi:10.1073/pnas.1202191109
-
Fauser F, Roth N, Pacher M, Ilg G, Sanchez-Fernandez R, Biesgen C, Puchta H (2012) In planta gene targeting. Proc Natl Acad Sci. doi: 10. 1073/pnas. 1202191109.
-
(2012)
Proc Natl Acad Sci
-
-
Fauser, F.1
Roth, N.2
Pacher, M.3
Ilg, G.4
Sanchez-Fernandez, R.5
Biesgen, C.6
Puchta, H.7
-
9
-
-
0027012738
-
A versatile binary vector system with a T-DNA organisational structure conducive to efficient integration of cloned DNA into the plant genome
-
Gleave AP (1992) A versatile binary vector system with a T-DNA organisational structure conducive to efficient integration of cloned DNA into the plant genome. Plant Mol Biol 20: 1203-1207.
-
(1992)
Plant Mol Biol
, vol.20
, pp. 1203-1207
-
-
Gleave, A.P.1
-
10
-
-
0030813154
-
Non-homologous DNA end joining in plant cells is associated with deletions and filler DNA insertions
-
doi:10.1093/nar/25.22.4650
-
Gorbunova V, Levy AA (1997) Non-homologous DNA end joining in plant cells is associated with deletions and filler DNA insertions. Nucleic Acids Res 25(22): 4650-4657. doi: 10. 1093/nar/25. 22. 4650.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.22
, pp. 4650-4657
-
-
Gorbunova, V.1
Levy, A.A.2
-
11
-
-
0342803566
-
pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation
-
Hellens RP, Anne Edwards E, Leyland NR, Bean S, Mullineaux PM (2000) pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation. Plant Mol Biol 42(6): 819-832.
-
(2000)
Plant Mol Biol
, vol.42
, Issue.6
, pp. 819-832
-
-
Hellens, R.P.1
Anne Edwards, E.2
Leyland, N.R.3
Bean, S.4
Mullineaux, P.M.5
-
12
-
-
33745437482
-
Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants
-
doi:10.1186/1746-4811-1-13
-
Hellens R, Allan A, Friel E, Bolitho K, Grafton K, Templeton M, Karunairetnam S, Gleave A, Laing W (2005) Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants. Plant Methods 1(1): 13. doi: 10. 1186/1746-4811-1-13.
-
(2005)
Plant Methods
, vol.1
, Issue.1
, pp. 13
-
-
Hellens, R.1
Allan, A.2
Friel, E.3
Bolitho, K.4
Grafton, K.5
Templeton, M.6
Karunairetnam, S.7
Gleave, A.8
Laing, W.9
-
13
-
-
84930480889
-
A transient assay for recombination demonstrates that Arabidopsis SNM1 and XRCC3 enhance non-homologous recombination
-
doi:10.4238/vol10-3gmr1347
-
Johnson RA, Hellens RP, Love DR (2011) A transient assay for recombination demonstrates that Arabidopsis SNM1 and XRCC3 enhance non-homologous recombination. Genet Mol Res 10(3): 2104-2132. doi: 10. 4238/vol10-3gmr1347.
-
(2011)
Genet Mol Res
, vol.10
, Issue.3
, pp. 2104-2132
-
-
Johnson, R.A.1
Hellens, R.P.2
Love, D.R.3
-
14
-
-
0038947196
-
Site-specific cleavage of DNA-RNA hybrids by zinc finger/FokI cleavage domain fusions
-
doi:10.1016/S0378-1119(97)00489-7
-
Kim Y-G, Shi Y, Berg JM, Chandrasegaran S (1997) Site-specific cleavage of DNA-RNA hybrids by zinc finger/FokI cleavage domain fusions. Gene 203(1): 43-49. doi: 10. 1016/S0378-1119(97)00489-7.
-
(1997)
Gene
, vol.203
, Issue.1
, pp. 43-49
-
-
Kim, Y.-G.1
Shi, Y.2
Berg, J.M.3
Chandrasegaran, S.4
-
15
-
-
84863118393
-
Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification
-
doi:10.1007/s11103-012-9875-4
-
Li L, Piatek M, Atef A, Piatek A, Wibowo A, Fang X, Sabir J, Zhu J-K, Mahfouz M (2012) Rapid and highly efficient construction of TALE-based transcriptional regulators and nucleases for genome modification. Plant Mol Biol 78(4): 407-416. doi: 10. 1007/s11103-012-9875-4.
-
(2012)
Plant Mol Biol
, vol.78
, Issue.4
, pp. 407-416
-
-
Li, L.1
Piatek, M.2
Atef, A.3
Piatek, A.4
Wibowo, A.5
Fang, X.6
Sabir, J.7
Zhu, J.-K.8
Mahfouz, M.9
-
16
-
-
13844319542
-
Targeted mutagenesis using zinc-finger nucleases in Arabidopsis
-
Lloyd A, Plaisier CL, Drews GN, Carroll D (2005) Targeted mutagenesis using zinc-finger nucleases in Arabidopsis. Proc Natl Acad Sci USA 102(6): 2232-2237.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.6
, pp. 2232-2237
-
-
Lloyd, A.1
Plaisier, C.L.2
Drews, G.N.3
Carroll, D.4
-
17
-
-
79952302385
-
De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
-
doi:10.1073/pnas.1019533108
-
Mahfouz MM, Li L, Shamimuzzaman M, Wibowo A, Fang X, Zhu J-K (2011) De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proc Natl Acad Sci. doi: 10. 1073/pnas. 1019533108.
-
(2011)
Proc Natl Acad Sci
-
-
Mahfouz, M.M.1
Li, L.2
Shamimuzzaman, M.3
Wibowo, A.4
Fang, X.5
Zhu, J.-K.6
-
18
-
-
84873734105
-
RNA-guided human genome engineering via Cas9
-
doi:10.1126/science.1232033
-
Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE, Norville JE, Church GM (2013) RNA-guided human genome engineering via Cas9. Science 339(6121): 823-826. doi: 10. 1126/science. 1232033.
-
(2013)
Science
, vol.339
, Issue.6121
, pp. 823-826
-
-
Mali, P.1
Yang, L.2
Esvelt, K.M.3
Aach, J.4
Guell, M.5
DiCarlo, J.E.6
Norville, J.E.7
Church, G.M.8
-
19
-
-
78249245697
-
Nontransgenic genome modification in plant cells
-
doi:10.1104/pp.110.164806
-
Marton I, Zuker A, Shklarman E, Zeevi V, Tovkach A, Roffe S, Ovadis M, Tzfira T, Vainstein A (2010) Nontransgenic genome modification in plant cells. Plant Physio 154(3): 1079-1087. doi: 10. 1104/pp. 110. 164806.
-
(2010)
Plant Physio
, vol.154
, Issue.3
, pp. 1079-1087
-
-
Marton, I.1
Zuker, A.2
Shklarman, E.3
Zeevi, V.4
Tovkach, A.5
Roffe, S.6
Ovadis, M.7
Tzfira, T.8
Vainstein, A.9
-
20
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
doi:10.1126/science.1178817
-
Moscou MJ, Bogdanove AJ (2009) A simple cipher governs DNA recognition by TAL effectors. Science 326(5959): 1501. doi: 10. 1126/science. 1178817.
-
(2009)
Science
, vol.326
, Issue.5959
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
21
-
-
24744454355
-
High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene
-
Shaked H, Melamed-Bessudo C, Levy AA (2005) High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene. PNAS 102(34): 12265-12269.
-
(2005)
Pnas
, vol.102
, Issue.34
, pp. 12265-12269
-
-
Shaked, H.1
Melamed-Bessudo, C.2
Levy, A.A.3
-
22
-
-
0028956789
-
Specific DNA-RNA hybrid binding by zinc finger proteins
-
Shi Y, Berg JM (1995) Specific DNA-RNA hybrid binding by zinc finger proteins. Science 268(5208): 282-284.
-
(1995)
Science
, vol.268
, Issue.5208
, pp. 282-284
-
-
Shi, Y.1
Berg, J.M.2
-
23
-
-
66249147273
-
Precise genome modification in the crop species Zea mays using zinc-finger nucleases
-
doi:10.1038/nature07992
-
Shukla VK, Doyon Y, Miller JC, DeKelver RC, Moehle EA, Worden SE, Mitchell JC, Arnold NL, Gopalan S, Meng X, Choi VM, Rock JM, Wu YY, Katibah GE, Zhifang G, McCaskill D, Simpson MA, Blakeslee B, Greenwalt SA, Butler HJ, Hinkley SJ, Zhang L, Rebar EJ, Gregory PD, Urnov FD (2009) Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459(7245): 437-441. doi: 10. 1038/nature07992.
-
(2009)
Nature
, vol.459
, Issue.7245
, pp. 437-441
-
-
Shukla, V.K.1
Doyon, Y.2
Miller, J.C.3
DeKelver, R.C.4
Moehle, E.A.5
Worden, S.E.6
Mitchell, J.C.7
Arnold, N.L.8
Gopalan, S.9
Meng, X.10
Choi, V.M.11
Rock, J.M.12
Wu, Y.Y.13
Katibah, G.E.14
Zhifang, G.15
McCaskill, D.16
Simpson, M.A.17
Blakeslee, B.18
Greenwalt, S.A.19
Butler, H.J.20
Hinkley, S.J.21
Zhang, L.22
Rebar, E.J.23
Gregory, P.D.24
Urnov, F.D.25
more..
-
24
-
-
59149103100
-
A toolbox and procedural notes for characterizing novel zinc finger nucleases for genome editing in plant cells
-
doi:10.1111/j.1365-313X.2008.03718.x
-
Tovkach A, Zeevi V, Tzfira T (2009) A toolbox and procedural notes for characterizing novel zinc finger nucleases for genome editing in plant cells. Plant J 57(4): 747-757. doi: 10. 1111/j. 1365-313X. 2008. 03718. x.
-
(2009)
Plant J
, vol.57
, Issue.4
, pp. 747-757
-
-
Tovkach, A.1
Zeevi, V.2
Tzfira, T.3
-
25
-
-
66249093890
-
High-frequency modification of plant genes using engineered zinc-finger nucleases
-
doi:10.1038/nature07845
-
Townsend JA, Wright DA, Winfrey RJ, Fu F, Maeder ML, Joung JK, Voytas DF (2009) High-frequency modification of plant genes using engineered zinc-finger nucleases. Nature 459(7245): 442-445. doi: 10. 1038/nature07845.
-
(2009)
Nature
, vol.459
, Issue.7245
, pp. 442-445
-
-
Townsend, J.A.1
Wright, D.A.2
Winfrey, R.J.3
Fu, F.4
Maeder, M.L.5
Joung, J.K.6
Voytas, D.F.7
-
26
-
-
84859420035
-
Genome modifications in plant cells by custom-made restriction enzymes
-
doi:10.1111/j.1467-7652.2011.00672.x
-
Tzfira T, Weinthal D, Marton I, Zeevi V, Zuker A, Vainstein A (2012) Genome modifications in plant cells by custom-made restriction enzymes. Plant Biotechnol J 10(4): 373-389. doi: 10. 1111/j. 1467-7652. 2011. 00672. x.
-
(2012)
Plant Biotechnol J
, vol.10
, Issue.4
, pp. 373-389
-
-
Tzfira, T.1
Weinthal, D.2
Marton, I.3
Zeevi, V.4
Zuker, A.5
Vainstein, A.6
-
27
-
-
77953285393
-
Genome editing in plant cells by zinc finger nucleases
-
Weinthal D, Tovkach A, Zeevi V, Tzfira T (2010) Genome editing in plant cells by zinc finger nucleases. Trends Plant Sci 15(6): 308-321.
-
(2010)
Trends Plant Sci
, vol.15
, Issue.6
, pp. 308-321
-
-
Weinthal, D.1
Tovkach, A.2
Zeevi, V.3
Tzfira, T.4
-
28
-
-
84878349495
-
TALENs enable efficient plant genome engineering
-
doi:10.1104/pp.112.205179
-
Zhang Y, Zhang F, Li X, Baller JA, Qi Y, Starker CG, Bogdanove AJ, Voytas DF (2012) TALENs enable efficient plant genome engineering. Plant Physiol. doi: 10. 1104/pp. 112. 205179.
-
(2012)
Plant Physiol
-
-
Zhang, Y.1
Zhang, F.2
Li, X.3
Baller, J.A.4
Qi, Y.5
Starker, C.G.6
Bogdanove, A.J.7
Voytas, D.F.8
-
29
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
doi:10.1093/nar/gkg595
-
Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31(13): 3406-3415. doi: 10. 1093/nar/gkg595.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3406-3415
-
-
Zuker, M.1
|