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Volumn 203, Issue 1, 1997, Pages 43-49

Site-specific cleavage of DNA-RNA hybrids by zinc finger/FokI cleavage domain fusions

Author keywords

Chimeric restriction endonuclease; Flavorbacterium okeanokoites; Protein engineering; Recognition and cleavage domains

Indexed keywords

DNA; DOUBLE STRANDED DNA; HYBRID PROTEIN; RNA; ZINC FINGER PROTEIN;

EID: 0038947196     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(97)00489-7     Document Type: Article
Times cited : (59)

References (27)
  • 1
    • 0031114986 scopus 로고    scopus 로고
    • Letting your fingers do the walking
    • Berg J.M. Letting your fingers do the walking. Nature Biotechnol. 15:1997;323.
    • (1997) Nature Biotechnol. , vol.15 , pp. 323
    • Berg, J.M.1
  • 2
    • 0031556945 scopus 로고    scopus 로고
    • Two-domain structure of the td intron-encoded endonuclease I-TevI correlates with the two-domain configuration of the homing site
    • Derbyshire V., Kowalski J.C., Dansereau J.T., Hauer C.R., Belfort M. Two-domain structure of the td intron-encoded endonuclease I-TevI correlates with the two-domain configuration of the homing site. J. Mol. Biol. 266:1997;494-506.
    • (1997) J. Mol. Biol. , vol.266 , pp. 494-506
    • Derbyshire, V.1    Kowalski, J.C.2    Dansereau, J.T.3    Hauer, C.R.4    Belfort, M.5
  • 3
    • 0027401045 scopus 로고
    • Use of zinc-finger consensus sequence framework and specificity rules to design specific DNA binding proteins
    • Desjarlais J.R., Berg J.M. Use of zinc-finger consensus sequence framework and specificity rules to design specific DNA binding proteins. Proc. Natl. Acad. Sci. USA. 90:1993;2256-2260.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2256-2260
    • Desjarlais, J.R.1    Berg, J.M.2
  • 4
    • 0018788204 scopus 로고
    • Site specific enzymatic cleavage of RNA
    • Donis-Keller H. Site specific enzymatic cleavage of RNA. Nucleic Acids Res. 7:1979;179-192.
    • (1979) Nucleic Acids Res. , vol.7 , pp. 179-192
    • Donis-Keller, H.1
  • 5
    • 0027749348 scopus 로고
    • The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc figure DNA recognition
    • Fairall L., Schwabe J.W.R., Chapman L., Finch J.T., Rhodes D. The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc figure DNA recognition. Nature. 366:1993;483-487.
    • (1993) Nature , vol.366 , pp. 483-487
    • Fairall, L.1    Schwabe, J.W.R.2    Chapman, L.3    Finch, J.T.4    Rhodes, D.5
  • 6
    • 0031053362 scopus 로고    scopus 로고
    • A general strategy for selecting high affinity zinc-finger proteins for diverse DNA target sites
    • Griesman H.A., Pabo C.O. A general strategy for selecting high affinity zinc-finger proteins for diverse DNA target sites. Science. 275:1997;657-661.
    • (1997) Science , vol.275 , pp. 657-661
    • Griesman, H.A.1    Pabo, C.O.2
  • 7
    • 0023659137 scopus 로고
    • New metal chelate adsorbent selective for proteins and peptides containing neighboring histidine residues
    • Hochuli E., Dobeli H., Schacher A. New metal chelate adsorbent selective for proteins and peptides containing neighboring histidine residues. J. Chromatogr. 411:1987;177-184.
    • (1987) J. Chromatogr. , vol.411 , pp. 177-184
    • Hochuli, E.1    Dobeli, H.2    Schacher, A.3
  • 8
    • 0029757189 scopus 로고    scopus 로고
    • Sp1ase, A new class IIS Zinc finger restriction endonuclease with specificity for Sp1 binding sites
    • Huang B., Schaeffer C.J., Li Q., Tsai M-W. Sp1ase, A new class IIS Zinc finger restriction endonuclease with specificity for Sp1 binding sites. J. Protein Chem. 15:1996;481-489.
    • (1996) J. Protein Chem. , vol.15 , pp. 481-489
    • Huang, B.1    Schaeffer, C.J.2    Li, Q.3    Tsai, M-W.4
  • 9
    • 0024450479 scopus 로고
    • Purification and characterization of FokI restriction endonuclease
    • Kaczorowski T., Skowron P., Podhajska A.J. Purification and characterization of FokI restriction endonuclease. Gene. 80:1989;209-216.
    • (1989) Gene , vol.80 , pp. 209-216
    • Kaczorowski, T.1    Skowron, P.2    Podhajska, A.J.3
  • 11
    • 0028091729 scopus 로고
    • Insertion and deletion mutants of FokI restriction endonuclease
    • Kim Y-G., Li L., Chandrasegaran S. Insertion and deletion mutants of FokI restriction endonuclease. J. Biol. Chem. 269:1994;31978-31982.
    • (1994) J. Biol. Chem. , vol.269 , pp. 31978-31982
    • Kim, Y-G.1    Li, L.2    Chandrasegaran, S.3
  • 12
    • 0030032063 scopus 로고    scopus 로고
    • Hybrid restriction enzymes: Zinc finger fusion to the FokI cleavage domain
    • Kim Y-G., Cha J., Chandrasegaran S. Hybrid restriction enzymes: Zinc finger fusion to the FokI cleavage domain. Proc. Natl. Acad. Sci. USA. 93:1996;1156-1160.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 1156-1160
    • Kim, Y-G.1    Cha, J.2    Chandrasegaran, S.3
  • 13
    • 0029664495 scopus 로고    scopus 로고
    • Structural requirements for FokI-DNA interaction and oligoeoxy ribonucleotide instructed cleavage
    • Kim S.C., Skowron P.M., Szybalski W. Structural requirements for FokI-DNA interaction and oligoeoxy ribonucleotide instructed cleavage. J. Mol. Biol. 265:1996;638-649.
    • (1996) J. Mol. Biol. , vol.265 , pp. 638-649
    • Kim, S.C.1    Skowron, P.M.2    Szybalski, W.3
  • 14
    • 0024536167 scopus 로고
    • The FokI restriction-modification system: Organization and nucleotide sequences of the restriction-modification system
    • Kita K., Kotani H., Sugisaki H., Takanami M. The FokI restriction-modification system: Organization and nucleotide sequences of the restriction-modification system. J. Biol. Chem. 264:1989;5751-5756.
    • (1989) J. Biol. Chem. , vol.264 , pp. 5751-5756
    • Kita, K.1    Kotani, H.2    Sugisaki, H.3    Takanami, M.4
  • 15
    • 0029978308 scopus 로고    scopus 로고
    • Overproduction and characterization of the StsI restriction endonuclease
    • Kita K., Suisha M., Shintoh M., Yanase H., Kato N. Overproduction and characterization of the StsI restriction endonuclease. Gene. 169:1996;69-73.
    • (1996) Gene , vol.169 , pp. 69-73
    • Kita, K.1    Suisha, M.2    Shintoh, M.3    Yanase, H.4    Kato, N.5
  • 17
    • 0027398943 scopus 로고
    • Alteration of the cleavage distance of FokI restriction endonuclease by insertion mutagenesis
    • Li L., Chandrasegaran S. Alteration of the cleavage distance of FokI restriction endonuclease by insertion mutagenesis. Proc. Natl. Acad. Sci. USA. 90:1993;2764-2768.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2764-2768
    • Li, L.1    Chandrasegaran, S.2
  • 18
    • 0027518230 scopus 로고
    • C-terminal deletion mutants of FokI restriction endonuclease
    • Li L., Wu L.P., Clark R., Chandrasegaran S. C-terminal deletion mutants of FokI restriction endonuclease. Gene. 133:1993;79-84.
    • (1993) Gene , vol.133 , pp. 79-84
    • Li, L.1    Wu, L.P.2    Clark, R.3    Chandrasegaran, S.4
  • 19
    • 0024440974 scopus 로고
    • Nucleotide sequence of the FokI restriction-modification system: Separate strand specificity domain in the methyltransferase
    • Looney M.C., Moran L.S., Jack W.E., Feehery G.R., Benner J.S., Slatko B.E., Wilson G.G. Nucleotide sequence of the FokI restriction-modification system: separate strand specificity domain in the methyltransferase. Gene. 80:1989;209-216.
    • (1989) Gene , vol.80 , pp. 209-216
    • Looney, M.C.1    Moran, L.S.2    Jack, W.E.3    Feehery, G.R.4    Benner, J.S.5    Slatko, B.E.6    Wilson, G.G.7
  • 21
    • 0025773296 scopus 로고
    • Zinc finger-DNA recognition: Crystal structure of a Zif268-DNA complex at 2.1 Å
    • Pavietich N.P., Pabo C.O. Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 Å Science. 252:1991;809-817.
    • (1991) Science , vol.252 , pp. 809-817
    • Pavietich, N.P.1    Pabo, C.O.2
  • 22
    • 0027547987 scopus 로고
    • Zinc fingers
    • Rhodes D., Klug A. Zinc fingers. Sci. Am. 268:1993;56-65.
    • (1993) Sci. Am. , vol.268 , pp. 56-65
    • Rhodes, D.1    Klug, A.2
  • 23
    • 0027190862 scopus 로고
    • The DNA strand in DNA-RNA hybrid duplexes is neither B-form nor A-form in solution
    • Salaza M., Fedoroff O.Y., Miller J.M., Ribeiro N.S., Reid B.R. The DNA strand in DNA-RNA hybrid duplexes is neither B-form nor A-form in solution. Biochemistry. 32:1993;4207-4215.
    • (1993) Biochemistry , vol.32 , pp. 4207-4215
    • Salaza, M.1    Fedoroff, O.Y.2    Miller, J.M.3    Ribeiro, N.S.4    Reid, B.R.5
  • 24
    • 0028956789 scopus 로고
    • Specific DNA-RNA hybrid binding by zinc finger proteins
    • Shi Y., Berg J.M. Specific DNA-RNA hybrid binding by zinc finger proteins. Science. 268:1995;282-284.
    • (1995) Science , vol.268 , pp. 282-284
    • Shi, Y.1    Berg, J.M.2
  • 25
    • 0027419084 scopus 로고
    • Atypical DNA- binding properties of class-IIS restriction endonucleases: Evidence for recognition of the cognate sequence by a FokI monomer
    • Skowron P.M., Kaczorowski T., Tucholski J., Podhajska A.J. Atypical DNA- binding properties of class-IIS restriction endonucleases: evidence for recognition of the cognate sequence by a FokI monomer. Gene. 125:1993;1-10.
    • (1993) Gene , vol.125 , pp. 1-10
    • Skowron, P.M.1    Kaczorowski, T.2    Tucholski, J.3    Podhajska, A.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.