Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data

BMC Bioinformatics

Volumn 14, Issue 1, 2013, Pages

  Bao, Yanchun ^a   Vinciotti, Veronica ^a   Wit, Ernst ^b   't Hoen, Peter A C ^c,d  

^a BRUNEL UNIVERSITY   (United Kingdom)

^b UNIVERSITY OF GRONINGEN   (Netherlands)

^c LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

^d NETHERLANDS BIOINFORMATICS CENTRE   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

FALSE DISCOVERY RATE; IMMUNOPRECIPITATIONS; MIXTURE MODEL; MODEL PARAMETERS; PRIORI KNOWLEDGE; ROBUST DETECTION; SIGNAL-TO-BACKGROUND RATIO; STATISTICAL MODELLING;

EFFICIENCY; EXPERIMENTS; STATISTICAL METHODS;

ANTIBODIES;

DNA BINDING PROTEIN; TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; DNA SEQUENCE; HIGH THROUGHPUT SEQUENCING; METABOLISM; METHODOLOGY; STATISTICAL MODEL; PROCEDURES;

BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; DNA-BINDING PROTEINS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MODELS, STATISTICAL; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

EID: 84878225619     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-14-169     Document Type: Article

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