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Volumn 92, Issue 1, 2013, Pages 155-161

Gene duplication as a major force in evolution

Author keywords

diversity; duplicated genes; evolution; genome duplication; mutation; polyploidy

Indexed keywords

ARABIDOPSIS THALIANA; MAGNOLIOPHYTA; SACCHAROMYCES CEREVISIAE;

EID: 84877712982     PISSN: 00221333     EISSN: 09737731     Source Type: Journal    
DOI: 10.1007/s12041-013-0212-8     Document Type: Article
Times cited : (397)

References (55)
  • 1
    • 33645122069 scopus 로고    scopus 로고
    • Allele-specific, bi-directional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids
    • Adams K. L. and Wendel J. F. 2005 Allele-specific, bi-directional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybrids. Genetics171, 2139-2142.
    • (2005) Genetics , vol.171 , pp. 2139-2142
    • Adams, K.L.1    Wendel, J.F.2
  • 2
    • 11244349782 scopus 로고    scopus 로고
    • Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid
    • Adams K. L., Percifield R. and Wendel J. F. 2004 Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid. Genetics168, 2217-2226.
    • (2004) Genetics , vol.168 , pp. 2217-2226
    • Adams, K.L.1    Percifield, R.2    Wendel, J.F.3
  • 3
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative 2000 Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature408, 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 4
    • 0142059650 scopus 로고    scopus 로고
    • An Alu transposition model for the origin and expansion of human segmental duplications
    • Bailey J. A., Liu G. and Eichler E. E. 2003 An Alu transposition model for the origin and expansion of human segmental duplications. Am. J. Hum. Genet. 73, 823-834.
    • (2003) Am. J. Hum. Genet. , vol.73 , pp. 823-834
    • Bailey, J.A.1    Liu, G.2    Eichler, E.E.3
  • 5
    • 84891487611 scopus 로고    scopus 로고
    • Does gene duplication provide the engine for evolution?
    • Bergman J. 2006 Does gene duplication provide the engine for evolution? J. Creation20, 99-104.
    • (2006) J. Creation , vol.20 , pp. 99-104
    • Bergman, J.1
  • 6
    • 3142732892 scopus 로고    scopus 로고
    • Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution
    • Blanc G. and Wolfe K. H. 2004 Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. Plant Cell16, 1679-1691.
    • (2004) Plant Cell , vol.16 , pp. 1679-1691
    • Blanc, G.1    Wolfe, K.H.2
  • 7
    • 0037468758 scopus 로고    scopus 로고
    • Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
    • Bowers J. E., Chapman B. A., Rong J. and Paterson A. H. 2003 Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature422, 433-438.
    • (2003) Nature , vol.422 , pp. 433-438
    • Bowers, J.E.1    Chapman, B.A.2    Rong, J.3    Paterson, A.H.4
  • 8
    • 0000842626 scopus 로고
    • The Bar gene a duplication
    • Bridges C. B. 1936 The Bar gene a duplication. Science83, 210-211.
    • (1936) Science , vol.83 , pp. 210-211
    • Bridges, C.B.1
  • 9
    • 0025864962 scopus 로고
    • Retroposons - seeds of evolution
    • Brosius J. 1991 Retroposons - seeds of evolution. Science251, 753.
    • (1991) Science , vol.251 , pp. 753
    • Brosius, J.1
  • 10
    • 33644499450 scopus 로고    scopus 로고
    • Buffering crucial functions by paleologous duplicated genes may impart cyclicality to angiosperm genome duplication
    • Chapman B. A., Bowers J. E., Feltus F. A. and Paterson A. H. 2006 Buffering crucial functions by paleologous duplicated genes may impart cyclicality to angiosperm genome duplication. Proc. Natl. Acad. Sci. USA103, 2730-2735.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 2730-2735
    • Chapman, B.A.1    Bowers, J.E.2    Feltus, F.A.3    Paterson, A.H.4
  • 12
    • 0028973842 scopus 로고
    • The origin and early diversification of angiosperms
    • Crane P. R., Friis E. M. and Pedersen K. R. 1995 The origin and early diversification of angiosperms. Nature374, 27-33.
    • (1995) Nature , vol.374 , pp. 27-33
    • Crane, P.R.1    Friis, E.M.2    Pedersen, K.R.3
  • 15
    • 27144519666 scopus 로고    scopus 로고
    • Genome duplication and the origin of angiosperms
    • De Bodt S., Maere S. and van de Peer Y. 2005 Genome duplication and the origin of angiosperms. Trends Ecol. Evol. 20, 591-597.
    • (2005) Trends Ecol. Evol. , vol.20 , pp. 591-597
    • De Bodt, S.1    Maere, S.2    van de Peer, Y.3
  • 17
    • 0027384019 scopus 로고
    • Phylogenies and angiosperm diversification
    • Doyle J. A. and Donoghue M. J. 1993 Phylogenies and angiosperm diversification. Paleobiology19, 141-167.
    • (1993) Paleobiology , vol.19 , pp. 141-167
    • Doyle, J.A.1    Donoghue, M.J.2
  • 19
    • 0030959648 scopus 로고    scopus 로고
    • DNA sequence evidence for the segmental allotetraploid origin of maize
    • Gaut B. S. and Doebley J. F. 1997 DNA sequence evidence for the segmental allotetraploid origin of maize. Proc. Natl. Acad. Sci. USA94, 6809-6814.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 6809-6814
    • Gaut, B.S.1    Doebley, J.F.2
  • 20
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    • Goff S. A., Ricke D., Lan T. H., Presting G., Wang R., Dunn M. et al. 2002 A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science296, 92-100.
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3    Presting, G.4    Wang, R.5    Dunn, M.6
  • 21
    • 0004042690 scopus 로고
    • 2nd edn., New York, USA: Columbia University Press
    • Grant V. 1981 Plant speciation, 2nd edition. Columbia University Press, New York, USA.
    • (1981) Plant Speciation
    • Grant, V.1
  • 22
    • 84877717252 scopus 로고    scopus 로고
    • Duplication and deficiencies
    • 7th edn., Meerut, India: Rastogi Publication
    • Gupta P. K. 2007 Duplication and deficiencies. In Cytogenetics, 7th edition, pp. 19-43. Rastogi Publication, Meerut, India.
    • (2007) Cytogenetics , pp. 19-43
    • Gupta, P.K.1
  • 24
    • 0024440685 scopus 로고
    • Evolution of the major histocompatibility complex: independent origin of nonclassical class I genes in different groups of mammals
    • Hughes A. L. and Nei M. 1989 Evolution of the major histocompatibility complex: independent origin of nonclassical class I genes in different groups of mammals. Mol. Biol. Evol. 6, 559-579.
    • (1989) Mol. Biol. Evol. , vol.6 , pp. 559-579
    • Hughes, A.L.1    Nei, M.2
  • 25
    • 19344372749 scopus 로고    scopus 로고
    • Gene duplication: the genomic trade in spare parts
    • Hurles M. 2004 Gene duplication: the genomic trade in spare parts. PloS Biol. 2, 900-904.
    • (2004) PloS Biol. , vol.2 , pp. 900-904
    • Hurles, M.1
  • 27
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cereviseae
    • Kellis M., Birren B. W. and Lander E. S. 2004 Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cereviseae. Nature428, 617-624.
    • (2004) Nature , vol.428 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 28
    • 0034255126 scopus 로고    scopus 로고
    • Comparing sequenced segments of the tomato and Arabidopsis genomes: Large-scale duplication followed by selective gene loss creates a network of synteny
    • Ku H. M., Vision T., Liu J. and Tanksley S. D. 2000 Comparing sequenced segments of the tomato and Arabidopsis genomes: Large-scale duplication followed by selective gene loss creates a network of synteny. Proc. Natl. Acad. Sci. USA97, 9121-9126.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 9121-9126
    • Ku, H.M.1    Vision, T.2    Liu, J.3    Tanksley, S.D.4
  • 29
    • 0036918868 scopus 로고    scopus 로고
    • The impact of polyploidy on grass genome evolution
    • Levy A. A. and Feldman M. 2002 The impact of polyploidy on grass genome evolution. Plant Physiol. 130, 1587-1593.
    • (2002) Plant Physiol. , vol.130 , pp. 1587-1593
    • Levy, A.A.1    Feldman, M.2
  • 30
    • 0003421005 scopus 로고    scopus 로고
    • 1st edn., Sunderland, Massachusetts: Sinauer Associates
    • Li W. H. 1997 Molecular evolution, 1st edition. Sinauer Associates, Sunderland, Massachusetts.
    • (1997) Molecular Evolution
    • Li, W.H.1
  • 31
    • 24344442909 scopus 로고    scopus 로고
    • Human sub-telomeres are hot spots of inter chromosomal recombination and segmental duplication
    • Linardopoulou E. V., Williams E. M., Fan Y., Friedman C., Young J. M. and Trask B. J. 2005 Human sub-telomeres are hot spots of inter chromosomal recombination and segmental duplication. Nature437, 94-100.
    • (2005) Nature , vol.437 , pp. 94-100
    • Linardopoulou, E.V.1    Williams, E.M.2    Fan, Y.3    Friedman, C.4    Young, J.M.5    Trask, B.J.6
  • 32
    • 0242354129 scopus 로고    scopus 로고
    • The origin of new genes: glimpses from the young and old
    • Long M., Betran E., Thornton K. and Wang W. 2003 The origin of new genes: glimpses from the young and old. Nat. Rev. Genet. 4, 865-875.
    • (2003) Nat. Rev. Genet. , vol.4 , pp. 865-875
    • Long, M.1    Betran, E.2    Thornton, K.3    Wang, W.4
  • 33
    • 0034634395 scopus 로고    scopus 로고
    • The evolutionary fate and consequences of duplicate genes
    • Lynch M. and Conery J. S. 2000 The evolutionary fate and consequences of duplicate genes. Science290, 1151-1155.
    • (2000) Science , vol.290 , pp. 1151-1155
    • Lynch, M.1    Conery, J.S.2
  • 35
    • 0028184403 scopus 로고
    • Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms
    • Masterson J. 1994 Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms. Science264, 421-423.
    • (1994) Science , vol.264 , pp. 421-423
    • Masterson, J.1
  • 36
    • 0343621499 scopus 로고    scopus 로고
    • Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
    • Mayer K., Schüller C., Wambutt R., Murphy G., Volckaert G., Pohl T. et al. 1999 Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature402, 769-777.
    • (1999) Nature , vol.402 , pp. 769-777
    • Mayer, K.1    Schüller, C.2    Wambutt, R.3    Murphy, G.4    Volckaert, G.5    Pohl, T.6
  • 37
    • 0034718504 scopus 로고    scopus 로고
    • Purifying selection and birth-and-death evolution in the ubiquitin gene family
    • Nei M., Rogozin I. B. and Piontkivska H. 2000 Purifying selection and birth-and-death evolution in the ubiquitin gene family. Proc. Natl. Acad. Sci. USA97, 10866-10871.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10866-10871
    • Nei, M.1    Rogozin, I.B.2    Piontkivska, H.3
  • 38
    • 58249105076 scopus 로고    scopus 로고
    • Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
    • Ni Z., Kim E. D., Ha M., Lackey E., Liu J., Zhang Y. et al. 2009 Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids. Nature457, 327-331.
    • (2009) Nature , vol.457 , pp. 327-331
    • Ni, Z.1    Kim, E.D.2    Ha, M.3    Lackey, E.4    Liu, J.5    Zhang, Y.6
  • 39
    • 0030836756 scopus 로고    scopus 로고
    • Evolution of genetic redundancy
    • Nowak M. A., Boerlijst M. C. and Smith J. M. 1997 Evolution of genetic redundancy. Nature388, 167-171.
    • (1997) Nature , vol.388 , pp. 167-171
    • Nowak, M.A.1    Boerlijst, M.C.2    Smith, J.M.3
  • 41
    • 0028980489 scopus 로고
    • Evolution of immunoglobulin VH pseudogenes in chickens
    • Ota T. and Nei M. 1995 Evolution of immunoglobulin VH pseudogenes in chickens. Mol. Biol. Evol. 12, 94-102.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 94-102
    • Ota, T.1    Nei, M.2
  • 42
    • 39749090675 scopus 로고    scopus 로고
    • Quantifying the major mechanisms of recent gene duplications in the human and mouse genomes: a novel strategy to estimate gene duplication rates
    • Pan D. and Zhang L. 2007 Quantifying the major mechanisms of recent gene duplications in the human and mouse genomes: a novel strategy to estimate gene duplication rates. Genome Biol. 8, R158.
    • (2007) Genome Biol. , vol.8 , pp. 158
    • Pan, D.1    Zhang, L.2
  • 43
    • 0034646331 scopus 로고    scopus 로고
    • The olfactory receptor gene repertoire in primates and mouse: evidence for reduction of the functional fraction in primates
    • Rouquier S., Blancher A. and Giorgi D. 2000 The olfactory receptor gene repertoire in primates and mouse: evidence for reduction of the functional fraction in primates. Proc. Natl. Acad. Sci. USA97, 2870-2874.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 2870-2874
    • Rouquier, S.1    Blancher, A.2    Giorgi, D.3
  • 44
    • 0036245495 scopus 로고    scopus 로고
    • Segmental duplications and the evolution of the primate genome
    • Samonte R. V. and Eichler E. E. 2002 Segmental duplications and the evolution of the primate genome. Nat. Rev. Genet. 3, 65-72.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 65-72
    • Samonte, R.V.1    Eichler, E.E.2
  • 45
    • 0034013059 scopus 로고    scopus 로고
    • International rice genome sequencing project
    • Sasaki T. and Burr B. 2000 International rice genome sequencing project. The effort to completely sequence the rice genome. Curr. Opin. Plant Biol. 3, 138-141.
    • (2000) Curr. Opin. Plant Biol. , vol.3 , pp. 138-141
    • Sasaki, T.1    Burr, B.2
  • 48
    • 1542380397 scopus 로고    scopus 로고
    • A transitional-combinatorial theory for the origin of angiosperms
    • Stuessy T. F. 2004 A transitional-combinatorial theory for the origin of angiosperms. Taxon53, 3-16.
    • (2004) Taxon , vol.53 , pp. 3-16
    • Stuessy, T.F.1
  • 49
    • 33745617700 scopus 로고    scopus 로고
    • Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homologue leaving clusters enriched in the sensitive genes
    • Thomas B. C., Pedersen B. and Freeling M. 2006 Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homologue leaving clusters enriched in the sensitive genes. Genome Res. 16, 934-946.
    • (2006) Genome Res. , vol.16 , pp. 934-946
    • Thomas, B.C.1    Pedersen, B.2    Freeling, M.3
  • 51
    • 0032864281 scopus 로고    scopus 로고
    • Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids
    • Wilson W. A., Harrington S. E., Woodman W. L., Lee M., Sorrells M. E. and McCouch S. R. 1999 Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids. Genetics153, 453-473.
    • (1999) Genetics , vol.153 , pp. 453-473
    • Wilson, W.A.1    Harrington, S.E.2    Woodman, W.L.3    Lee, M.4    Sorrells, M.E.5    McCouch, S.R.6
  • 52
    • 0031690553 scopus 로고    scopus 로고
    • Ecological aspects of the cretaceous flowering plant radiation
    • Wing S. L. and Boucher L. D. 1998 Ecological aspects of the cretaceous flowering plant radiation. Annu. Rev. Earth Planet Sci. 26, 379-421.
    • (1998) Annu. Rev. Earth Planet Sci. , vol.26 , pp. 379-421
    • Wing, S.L.1    Boucher, L.D.2
  • 53
    • 0030947344 scopus 로고    scopus 로고
    • Molecular evidence for an ancient duplication of the entire yeast genome
    • Wolfe K. H. and Shields D. C. 1997 Molecular evidence for an ancient duplication of the entire yeast genome. Nature387, 708-713.
    • (1997) Nature , vol.387 , pp. 708-713
    • Wolfe, K.H.1    Shields, D.C.2
  • 54
    • 40849085290 scopus 로고    scopus 로고
    • A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit
    • Xiao H., Jiang N., Schaffner E., Stockinger E. J. and van der Knaap E. 2008 A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit. Science319, 1527-1530.
    • (2008) Science , vol.319 , pp. 1527-1530
    • Xiao, H.1    Jiang, N.2    Schaffner, E.3    Stockinger, E.J.4    van der Knaap, E.5
  • 55
    • 0037500141 scopus 로고    scopus 로고
    • Evolution by gene duplication: an update
    • Zhang J. 2003 Evolution by gene duplication: an update. Trends Ecol. Evol. 18, 192-198.
    • (2003) Trends Ecol. Evol. , vol.18 , pp. 192-198
    • Zhang, J.1


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