Attribution of the French human Salmonellosis cases to the main food-sources according to the type of surveillance data

Preventive Veterinary Medicine

Volumn 110, Issue 1, 2013, Pages 12-27

  David, J M ^a,b,c,d   Sanders, P ^a   Bemrah, N ^a   Granier, S A ^e   Denis, M ^a   Weill, F X ^c   Guillemot, D ^b,c,d   Watier, L ^b,c,d  

^a FRENCH AGENCY FOR FOOD   (France)

^b INSERM   (France)

^c INSTITUT PASTEUR   (France)

^d University Versailles Saint Quentin UVSQ   (France)

^e UNIVERSITÉ PARIS EST   (France)

Author keywords

Public health; Salmonella; Source attribution; Surveillance; Zoonosis

Indexed keywords

ARTICLE; BAYES THEOREM; BIOLOGICAL MODEL; EPIDEMIOLOGICAL MONITORING; FOOD CONTROL; FRANCE; HUMAN; MICROBIOLOGY; PHYSIOLOGY; PREVALENCE; SALMONELLA; SALMONELLA FOOD POISONING;

BAYES THEOREM; EPIDEMIOLOGICAL MONITORING; FOOD MICROBIOLOGY; FRANCE; HUMANS; MODELS, BIOLOGICAL; PREVALENCE; SALMONELLA; SALMONELLA FOOD POISONING;

ANIMALIA; BACTERIA (MICROORGANISMS); SALMONELLA;

EID: 84876744154     PISSN: 01675877     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.prevetmed.2013.02.002     Document Type: Article

References (54)

1. Allard D.G. The 'farm to plate' approach to food safety - Everyone's business. Can. J. Infect. Dis. 2002, 13:185-190.
2. Anonymous Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline study on the prevalence of Salmonella in holdings of laying hen flocks of Gallus gallus. The EFSA J. 2007, 97:1-84.
3. Anonymous Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline survey on the prevalence of Salmonella in broiler flocks of Gallus gallus, in the EU, 2005-2006 - Part A: Salmonella prevalence estimates. The EFSA J. 2007, 98:1-85.
4. Anonymous Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline survey on the prevalence of Salmonella in slaughter pigs, in the EU, 2006-2007 - Part A: Salmonella prevalence estimates. The EFSA J. 2008, 135:1-111.
5. Anonymous Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline survey on the prevalence of Salmonella in turkey flocks, in the EU, 2006-2007 - Part A: Salmonella prevalence estimates. The EFSA J. 2008, 134:1-91.
6. Batz M.B., Doyle M.P., Morris J.G., Painter J., Singh R., Tauxe R.V., Taylor M.R., Wong D.M.A.L.F. Attributing illness to food. Emerging Infect. Dis. 2005, 11:993-999.
7. Bellido Blasco J.B., Gonzalez Cano J.M., Galiano J.V., Bernat S., Arnedo A., Gonzalez Moran F. Factors associated with sporadic cases of salmonellosis in 1- to 7-year-old children. Study of cases and controls. Gac. Sanit. 1998, 12:118-125.
8. Beloeil P.A., Chauvin C., Proux K., Madec F., Fravalo P., Alioum A. Impact of the Salmonella status of market-age pigs and the pre-slaughter process on Salmonella caecal contamination at slaughter. Vet. Res. 2004, 35:513-530.
9. Berge A.C.B., Atwill E.R., Sischo W.M. Assessing antibiotic resistance in fecal Escherichia coli in young calves using cluster analysis techniques. Prev. Vet. Med. 2003, 61:91-102.
10. Blaser M.J., Newman L.S. A review of human salmonellosis: I. Infective dose. Rev. Infect. Dis. 1982, 4:1096-1106.
11. Bollaerts K., Aerts M., Faes C., Grijspeerdt K., Dewulf J., Mintiens K. Human salmonellosis: estimation of dose-illness from outbreak data. Risk Anal. 2008, 28:427-440.
12. Brandl M.T. Fitness of human enteric pathogens on plants and implications for food safety. Annu. Rev. Phytopathol. 2006, 44:367-392.
13. Braoudaki M., Hilton A.C. Adaptive resistance to biocides in Salmonella enterica and Escherichia coli O157 and cross-resistance to antimicrobial agents. J. Clin. Microbiol. 2004, 42:73-78.
14. Brooks S.P., Gelman A. General methods for monitoring convergence of iterative simulations. J. Comp. Graph. Stat. 1998, 7:434-455.
15. Brooks S.P., Roberts G.O. Convergence assessment techniques for Markov chain Monte Carlo. Stat. Comput. 1998, 8:319-335.
16. Coleman M.E., Marks H.M., Golden N.J., Latimer H.K. Discerning strain effects in microbial dose-response data. J. Toxicol. Environ. Health A 2004, 67:667-685.
17. Combris P. The consumption of animal products in France: current tendencies and future perspectives. Prod. Anim. 1997, 10:267-274.
18. Condell O., Iversen C., Cooney S., Power K.A., Walsh C., Burgess C., Fanning S. Efficacy of biocides used in the modern food industry to control salmonella enterica, and links between biocide tolerance and resistance to clinically relevant antimicrobial compounds. Appl. Environ. Microbiol. 2012, 78:3087-3097.
19. Cowles M.K., Carlin B.P. Markov Chain Monte Carlo convergence diagnostics: a comparative review. J. Am. Stat. Assoc. 1996, 91:883-904.
20. D'Aoust J. Salmonella. Foodborne Bacterial Pathogens 1989, 327-445. Marcel Dekker, New York. M.P. Doyle (Ed.).
21. Danan C., Baroukh T., Moury F., Jourdan D.A.S.N., Brisabois A.Y.L.E.S. Automated early warning system for the surveillance of Salmonella isolated in the agro-food chain in France. Epidemiol. Infect. 2011, 139:736-741.
22. David J.M., Danan C., Chauvin C., Chazel M., Souillard R., Brisabois A., Weill F.X., Jourdan Da Silva N., Picherot M., Guillemot D., Sanders P. Structure of the French farm-to-table surveillance system for Salmonella. Rev. Med. Vet. 2011, 162:489-500.
23. David J.M., Guillemot D., Bemrah N., Thebault A., Brisabois A., Chemaly M., Weill F., Sanders P., Watier L. The Bayesian microbial subtyping attribution model: robustness to prior information and a proposition. Risk Anal. 2012, 10.1111/j.1539-6924.2012.01877.x.
24. De Jong B., Andersson Y., Ekdahl K. Effect of regulation and education on reptile-associated salmonellosis. Emerg. Infect. Dis. 2005, 11:398-403.
25. Denagamage T.N., O'Connor A.M., Sargeant J.M., Rajic? A., McKean J.D. Efficacy of vaccination to reduce Salmonella prevalence in live and slaughtered swine: a systematic review of literature from 1979 to 2007. Foodborne Pathog. Dis. 2007, 4:539-549.
26. Desenclos J.C., Vaillant V., De Valk H. Food-borne infections: do we need further data collection for public health action and research. Rev. Epidemiol. Sante Publique 2002, 50:67-79.
27. Edel W. Salmonella enteritidis eradication programme in poultry breeder flocks in The Netherlands. Int. J. Food Microbiol. 1994, 21:171-178.
28. Elviss N.C., Little C.L., Hucklesby L., Sagoo S., Surman-Lee S., de Pinna E., Threlfall E.J. Microbiological study of fresh herbs from retail premises uncovers an international outbreak of salmonellosis. Int. J. Food Microbiol. 2009.
29. Fabre L., Zhang J., Guigon G., Le Hello S., Guibert V., Accou-Demartin M., de Romans S., Lim C., Roux C., Passet V., Diancourt L., Guibourdenche M., Issenhuth-Jeanjean S., Achtman M., Brisse S., Sola C., Weill F.X. CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections. PLoS One 2012, 7:e36995.
30. Finley R., Reid-Smith R., Weese J.S. Human health implications of Salmonella-contaminated natural pet treats and raw pet food. Clin. Infect. Dis. 2006, 42:686-691.
31. Foley S.L., Lynne A.M. Food animal-associated Salmonella challenges: pathogenicity and antimicrobial resistance. J. Anim. Sci. 2008, 86:E173-E187. 110.2527/jas.2007-0447.
32. Hald T., Vose D., Wegener H.C., Koupeev T. A Bayesian approach to quantify the contribution of animal-food sources to human salmonellosis. Risk Anal. 2004, 24:255-269.
33. Havelaar A.H., Bräunig J., Christiansen K., Cornu M., Hald T., Mangen M.-J.J., Mølbak K., Pielaat A., Snary E., Van Pelt W., Velthuis A., Wahlstro?m H. Towards an integrated approach in supporting microbiological food safety decisions. Zoonoses Public Health 2007, 54:103-117.
34. ICMSF I.C.o.M.S.f.F. Use of epidemiologic data to measure the impact of food safety control programs. Food Control 2006, 17:825-837.
35. InVS, 2004. Morbidité et mortalité dues aux maladies infectieuses d'origine alimentaire en France. 192.
36. Jones T.F., Ingram L.A., Cieslak P.R., Vugia D.J., Tobin-D'Angelo M., Hurd S., Medus C., Cronquist A., Angulo F.J. Salmonellosis outcomes differ substantially by serotype. J. Infect. Dis. 2008, 198:109-114.
37. Kirk M.D., McKay I., Hall G.V., Dalton C.B., Stafford R., Unicomb L., Gregory J. Food safety: foodborne disease in Australia: the OzFoodNet experience. Clin. Infect. Dis. 2008, 47:392-400.
38. Lunn D.J., Thomas A., Best N., Spiegelhalter D. WinBUGS - A Bayesian modelling framework: concepts, structure, and extensibility. Stat. Comput. 2000, 10:325-337.
39. Marcus R., Varma J.K., Medus C., Boothe E.J., Anderson B.J., Crume T., Fullertone K.E., Moore M.R., White P.L., Lyszkowicz E., Voetsch A.C., Angulo F.J. Re-assessment of risk factors for sporadic Salmonella serotype Enteritidis infections: a case-control study in five FoodNet Sites, 2002-2003. Epidemiol. Infect. 2007, 135:84-92.
40. Martinez J.L., Baquero F. Interactions among strategies associated with bacterial infection: pathogenicity, epidemicity, and antibiotic resistance. Clin. Microbiol. Rev. 2002, 15:647-679.
41. Mather A.E., Haydon D.T., Matthews L., Mellor D.J., Reid-Smith R.J., Boerlin P., Dutil L., McEwen S.A., Reid S.W.J. Comparing active and passive surveillance of antimicrobial resistance: are we getting the whole story?. 12th International Symposium on Veterinary Epidemiology and Economics 2009.
42. Mermin J., Hutwagner L., Vugia D., Shallow S., Daily P., Bender J., Koehler J., Marcus R., Angulo F.J. Reptiles, amphibians, and human Salmonella infection: a population-based, case-control study. Clin. Infect. Dis. 2004, 38.
43. Mølbak K. Spread of resistant bacteria and resistance genes from animals to humans - The public health consequences. J. Vet. Med., Ser. B 2004, 51:364-369.
44. Mullner P., Jones G., Noble A., Spencer S.E.F., Hathaway S., French N.P. Source attribution of food-borne zoonoses in New Zealand: a modified hald model. Risk Anal. 2009, 29:970-984.
45. Poirier E., Watier L., Espie E., Weill F.X., De Valk H., Desenclos J.C. Evaluation of the impact on human salmonellosis of control measures targeted to Salmonella Enteritidis and Typhimurium in poultry breeding using time-series analysis and intervention models in France. Epidemiol. Infect. 2008, 136:1217-1224.
46. Poole K. Bacterial stress responses as determinants of antimicrobial resistance. J. Antimicrob. Chemother. 2012, 67:2069-2089.
47. Rostagno M.H., Hurd H.S., McKean J.D. Resting pigs on transport trailers as an intervention strategy to reduce Salmonella enterica prevalence at slaughter. J. Food Prot. 2005, 68:1720-1723.
48. Sarwari A.R., Magder L.S., Levine P., McNamara A.M., Knower S., Armstrong G.L., Etzel R., Hollingsworth J., Morris J.G.J. Serotype distribution of Salmonella isolates from food animals after slaughter differs from that of isolates found in humans. J. Infect. Dis. 2001, 183:1295-1299.
49. Sofos J.N. Challenges to meat safety in the 21st century. Meat Sci. 2008, 78:3-13.
50. Soussy C.J., Carret G., Cavallo J.D., Chardon H., Chidiac C., Choutet P., Courvalin P., Dabernat H., Drugeon H., Dubreuil L., Goldstein F., Jarlier V., Leclercq R., Nicolas-Chanoine M.H., Philippon A., Quentin C., Rouveix B., Sirot J. Antibiogram Committee of the French Microbiology Society. Report 2000-2001. Pathol. Biol. (Paris) 2000, 48:832-871.
51. Todd E.C., Greig J.D., Bartleson C.A., Michaels B.S. Outbreaks where food workers have been implicated in the spread of foodborne disease. Part 5. Sources of contamination and pathogen excretion from infected persons. J. Food Prot. 2008, 71:2582-2595.
52. Volatier, J.L., 2000. Enquête nationale sur les consommations alimentaires. In: Tec&Doc (Ed.) CREDOC-AFSSA-DGAL.
53. Wegener H.C., Hald T., Wong D.L.F., Madsen M., Korsgaard H., Bager F., Gerner-Smidt P., Mølbak K. Salmonella control programs in Denmark. Emerg. Infect. Dis. 2003, 9:774-780.
54. Woodward D.L., Khakhria R., Johnson W.M. Human salmonellosis associated with exotic pets. J. Clin. Microbiol. 1997, 35:2786-2790.