Anagenetic speciation in Ullung Island, Korea: Genetic diversity and structure in the island endemic species, Acer takesimense (Sapindaceae)

Journal of Plant Research

Volumn 126, Issue 3, 2013, Pages 323-333

  Takayama, Koji ^a   Sun, Byung Yun ^b   Stuessy, Tod F ^a  

^a UNIVERSITY OF VIENNA   (Austria)

^b Chonbuk National University   (South Korea)

Author keywords

Anagenetic speciation; Cladogenesis; Endemic plants; Korean Peninsula; Oceanic island; Phyletic speciation

Indexed keywords

ACER; ACER PSEUDOSIEBOLDIANUM; ACER TAKESIMENSE; SAPINDACEAE;

MICROSATELLITE DNA;

ACER; BAYES THEOREM; GENETIC VARIABILITY; GENETICS; ISLAND (GEOLOGICAL); PHYLOGENY; PHYLOGEOGRAPHY; POLYMERASE CHAIN REACTION; SOUTH KOREA; SPECIES DIFFERENTIATION;

ACER; BAYES THEOREM; GENETIC SPECIATION; GENETIC VARIATION; ISLANDS; MICROSATELLITE REPEATS; PHYLOGENY; PHYLOGEOGRAPHY; POLYMERASE CHAIN REACTION; REPUBLIC OF KOREA;

EID: 84876675007     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10265-012-0529-z     Document Type: Article

References (71)

1. Ackerly DD, Donoghue MJ (1998) Leaf size, sapling allometry, and Corner's rules: phylogeny and correlated evolution in maples (Acer). Am Nat 152: 767-791.
2. Baldwin BG (1997) Adaptive radiation of the Hawaiian Silversword alliance: congruence and conflict of phylogenetic evidence from molecular and non-molecular investigations. In: Givnish TJ, Sytsma KJ (eds) Molecular evolution and adaptive radiation. Cambridge University Press, Cambridge, pp 103-128.
3. Baldwin BG, Wessa BL (2000) Origin and relationships of the tarweed-silversword lineage (Compositae-Madiinae). Am J Bot 87: 1890-1908.
4. Böhle U-R, Hilger HH, Martin WF (1996) Island colonization and evolution of the insular woody habit in Echium L. (Boraginaceae). Proc Natl Acad Sci USA 93: 11740-11745.
5. Boutin-Ganache I, Raposo M, Raymond M, Deschepper CF (2001) M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods. Biotechniques 31: 24-28.
6. Bramwell D, Caujapé-Castells J (2011) The biology of island floras. Cambridge University Press, Cambridge.
7. Brookfield JFY (1996) A simple new method for estimating null allele frequency from heterozygote deficiency. Mol Ecol 5: 453-455.
8. Carlquist S (1974) Island biology. Columbia University Press, New York.
9. Chang C-S (1994) A critique of "Reexamination of vascular plants in Ullung Island, Korea II: taxonomic identity of Acer takesimense Nakai (Aceraceae)". Korean J Plant Taxon 24: 279-284.
10. Cho HJ, Kim ST, Park CW (1996) ITS sequences of some Acer species and phylogenetic implication. Korean J Plant Taxon 26: 271-291.
11. Chung C-H, Lim HS, Lee HJ (2010) Vegetation and climate history during the late Pleistocene and early Holocene inferred from pollen record in Gwangju area, South Korea. Quat Int 227: 61-67.
12. Cornuet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
13. Crawford DJ (2010) Progenitor-derivative species pairs and plant speciation. Taxon 59: 1413-1423.
14. Crawford DJ, Ruiz E, Stuessy TF, Tepe E, Aqueveque P, Gonzalez F, Jensen RJ, Anderson GJ, Bernardello G, Baeza CM, Swenson U, Silva OM (2001) Allozyme diversity in endemic flowering plant species of the Juan Fernandez Archipelago, Chile: ecological and historical factors with implications for conservation. Am J Bot 88: 2195-2203.
15. Crawford DJ, Archibald JK, Santos-Guerra A, Mort ME (2006) Allozyme diversity within and divergence among species of Tolpis (Asteraceae-Lactuceae) in the Canary Islands: systematic, evolutionary, and biogeographical implications. Am J Bot 93: 656-664.
16. Darwin C (1842) The structure and distribution of coral reefs. Smith, Elder and Co., London.
17. DeJoode DR, Wendel JF (1992) Genetic diversity and origin of the Hawaiian Islands cotton, Gossypium tomentosum. Am J Bot 79: 1311-1319.
18. Di Rienzo A, Peterson AC, Garza JC, Valdes AM, Slatkin M, Freimer NB (1994) Mutational processes of simple-sequence repeat loci in human-populations. Proc Natl Acad Sci USA 91: 3166-3170.
19. Ellegren H, Moore S, Robinson N, Byrne K, Ward W, Sheldon B (1997) Microsatellite evolution-a reciprocal study of repeat lengths at homologous loci in cattle and sheep. Mol Biol Evol 14: 854-860.
20. Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
21. Excoffier L, Laval G, Schneider S (2005) Arlequin (version 3. 0): an integrated software package for population genetics data analysis. Evol Bioinforma 1: 47-50.
22. Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164: 1567-1587.
23. Falush D, Stephens M, Pritchard JK (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Mol Ecol Notes 7: 574-578.
24. Forbes SH, Hogg JT, Buchanan FC, Crawford AM, Allendorf FW (1995) Microsatellite evolution in congeneric mammals: domestic and bighorn sheep. Mol Biol Evol 12: 1106-1113.
25. Frankham R (1997) Do island populations have less genetic variation than mainland populations? Heredity 78: 311-327.
26. Futuyma DJ (1997) Evolutionary biology. Sinauer Associates, Sunderland.
27. Gleiser G, Verdú M (2005) Repeated evolution of dioecy from androdioecy in Acer. New Phytol 165: 633-640.
28. Gleiser G, Verdu M, Segarra-Moragues JG, González-Martínez SC, Pannell JR (2008) Disassortative mating, sexual specialization, and the evolution of gender dimorphism in heterodichogamous Acer opalus. Evolution 62: 1676-1688.
29. Goudet J (1995) FSTAT (version 1. 2): a computer program to calculate F-statistics. J Hered 86: 485-486.
30. Grant PR (1996) Evolution on islands. Oxford University Press, Oxford.
31. Hubisz MJ, Falush D, Stephens M, Pritchard JK (2009) Inferring weak population structure with the assistance of sample group information. Mol Ecol Resour 9: 1322-1332.
32. Hurlbert SH (1971) The nonconcept of species diversity: a critique and alternative parameters. Ecology 52: 577-587.
33. Ito M, Soejima A, Ono M (1998) Genetic diversity of the endemic plants of the Bonin (Ogasawara) Islands. In: Stuessy TF, Ono M (eds) Evolution and speciation of island plants. Cambridge University Press, Cambridge, pp 141-154.
34. Kikuchi S, Shibata M, Tanaka H, Yoshimaru H, Niiyama K (2009) Analysis of the disassortative mating pattern in a heterodichogamous plant, Acer mono Maxim. using microsatellite markers. Plant Ecol 204: 43-54.
35. Kim YK (1985) Petrology of Ulreung volcanic island, Korea-Part 1. Geology. J Jpn Assoc Min Petrolog Econ Geol 80: 128-135.
36. Kimura M, Crow JF (1964) The number of alleles that can be maintained in a finite population. Genetics 49: 725-738.
37. Kong W-S (2000) Vegetational history of the Korean Peninsula. Glob Ecol Biogeogr 9: 391-402.
38. Langella O (1999) Populations, 1. 2. 30. http://www. bioinformatics. org/~tryphon/populations/.
39. Lee W-T, Yang I-S (1981) The flora of Ulreung Is. and Dogdo Island. A report on the scientific survey of the Ulreung and Dogdo Islands. The Korean Association for Conservation of Nature, Seoul, pp 61-94.
40. Luikart G, Allendorf FW, Cornuet JM, Sherwin WB (1998) Distortion of allele frequency distributions provides a test for recent population bottlenecks. J Hered 89: 238-247.
41. MacArthur RH, Wilson EO (1967) The theory of island biogeography. Princeton University Press, Princeton.
42. Marrero-Gómez MV, Ramón Arévalo J, Bañares-Baudet Á, Carqué Áamo E (2000) Study of the establishment of the endangered Echium acanthocarpum (Boraginaceae) in the Canary Islands. Biol Conserv 94: 183-190.
43. Nakai T (1918) Notulae ad plantas Japoniae et Koreae XVII. Bot Mag Tokyo 32: 103-110.
44. Nei M, Tajima F, Tateno Y (1983) Accuracy of estimated phylogenetic trees from molecular data II. Gene frequency data. J Mol Evol 19: 153-170.
45. Oh SH, Chen L, Kim SH, Kim YD, Shin H (2010) Phylogenetic relationship of Physocarpus insularis (Rosaceae) endemic on Ulleung Island: implications for conservation biology. J Plant Biol 53: 94-105.
46. Ota T, Kimura M (1973) A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet Res 22: 201-204.
47. Park CW, Oh SH, Shin H (1993) Reexamination of vascular plants in Ullung Island, Korea. II. Taxonomic identity of Acer takesimense Nakai (Aceraceae). Korean J Plant Taxon 23: 217-232.
48. Park CW, Oh SH, Shin H (1994) Character analysis and taxonomic identity of Acer takesimense Nakai. Korean J Plant Taxon 24: 285-294.
49. Pfosser MF, Guzy-Wrobelska J, Sun BY, Stuessy TF, Sugawara T, Fujii N (2002) The origin of species of Acer (Sapindaceae) endemic to Ullung Island, Korea. Syst Bot 27: 351-367.
50. Pfosser M, Jakubowsky G, Schluter PM, Fer T, Kato H, Stuessy TF, Sun BY (2005) Evolution of Dystaenia takesimana (Apiaceae), endemic to Ullung Island, Korea. Plant Syst Evol 256: 159-170.
51. Pfosser M, Sun B-Y, Stuessy TF, Jang C-G, Guo Y-P, Taejin K, Hwan KC, Kato H, Sugawara T (2011) Phylogeny of Hepatica (Ranunculaceae) and origin of Hepatica maxima Nakai endemic to Ullung Island, Korea. Stapfia 95: 16-27.
52. Piry S, Luikart G, Cornuet JM (1999) BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Hered 90: 502-503.
53. Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
54. Raymond M, Rousset F (1995) GENEPOP (version 1. 2): population genetics software for exact tests and ecumenism. J Hered 86: 248-249.
55. Rundell RJ, Price TD (2009) Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation. Trends Ecol Evol 24: 394-399.
56. Schluter D (1996) Adaptive radiation along genetic lines of least resistance. Evolution 50: 1766-1774.
57. Schluter D (2001) Ecology and the origin of species. Trends Ecol Evol 16: 372-380.
58. Stuessy TF (2007) Evolution of specific and genetic diversity during ontogeny of island floras: the importance of understanding process for interpreting island biogeographic patterns. In: Ebach MC, Tangney RS (eds) Biogeography in a changing world. CRC Press, Boca Raton, pp 117-133.
59. Stuessy T, Crawford DJ, Marticorena C (1990) Patterns of phylogeny in the endemic vascular flora of the Juan Fernandez Islands, Chile. Syst Bot 15: 338-346.
60. Stuessy TF, Jakubowsky G, Salguero-Gómez R, Pfosser M, Schluter PM, Fer T, Sun B-Y, Kato H (2006) Anagenetic evolution in island plants. J Biogeogr 33: 1259-1265.
61. Sun B-Y, Stuessy TF (1998) Preliminary observations on the evolution of endemic angiosperms of Ullung Island, Korea. In: Stuessy TF, Ono M (eds) Evolution and speciation of island plants. Cambridge University Press, Cambridge, pp 181-202.
62. Takayama K, López PS, König C, Kohl G, Novak J, Stuessy TF (2011) A simple and cost-effective approach for microsatellite isolation in non-model plant species using small-scale 454 pyrosequencing. Taxon 60: 1442-1449.
63. Takayama K, Sun B-Y, Stuessy TF (2012) Genetic consequences of anagenetic speciation in Acer okamotoanum (Sapindaceae) on Ullung Island, Korea. Ann Bot 109: 321-330.
64. van Gelderen DM, de Jong PC, Oterdoom HJ (1994) Maples of the world. Timber Press, Portland.
65. van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
66. Wallace AR (1881) Island life. Macmillan and Co., London.
67. Whittaker RJ (1998) Island biogeography. Oxford University Press, Oxford.
68. Whittaker RJ, Triantis KA, Ladle RJ (2008) A general dynamic theory of oceanic island biogeography. J Biogeogr 35: 977-994.
69. Yang J, Pak J-H (2006) Phylogeny of Korean Rubus (Rosaceae) based on ITS (nrDNA) and trnL/F intergenic region (cpDNA). J Plant Biol 49: 44-54.
70. Yang J, Yoon H-S, Pak J-H (2012) Phylogeny of Korean Rubus (Rosaceae) based on the second intron of the LEAFY gene. Can J Plant Sci 92: 461-472.
71. Yim Y-J, Lee E-B, Kim S-H (1981) Vegetation of Ulreung and Dogdo Islands. A Report on the Scientific Survey of the Ulreung and Dogdo Islands. The Korean Association for Conservation of Nature, Seoul.