메뉴 건너뛰기




Volumn 8, Issue 4, 2013, Pages

Vanillin Inhibits Translation and Induces Messenger Ribonucleoprotein (mRNP) Granule Formation in Saccharomyces cerevisiae: Application and Validation of High-Content, Image-Based Profiling

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL PROTEIN; MESSENGER RIBONUCLEOPROTEIN; MESSENGER RNA; RIBONUCLEOPROTEIN; UNCLASSIFIED DRUG; VANILLIN;

EID: 84876591791     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0061748     Document Type: Article
Times cited : (75)

References (37)
  • 3
    • 12544249147 scopus 로고    scopus 로고
    • Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass
    • Klinke HB, Thomsen AB, Ahring BK, (2004) Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass. Appl Microbiol Biotechnol 66: 10-26.
    • (2004) Appl Microbiol Biotechnol , vol.66 , pp. 10-26
    • Klinke, H.B.1    Thomsen, A.B.2    Ahring, B.K.3
  • 4
    • 65549118633 scopus 로고    scopus 로고
    • De novo biosynthesis of vanillin in fission yeast (Schizosaccharomyces pombe) and baker's yeast (Saccharomyces cerevisiae)
    • Hansen EH, Moller BL, Kock GR, Bunner CM, Kristensen C, et al. (2009) De novo biosynthesis of vanillin in fission yeast (Schizosaccharomyces pombe) and baker's yeast (Saccharomyces cerevisiae). Appl Environ Microbiol 75: 2765-2774.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 2765-2774
    • Hansen, E.H.1    Moller, B.L.2    Kock, G.R.3    Bunner, C.M.4    Kristensen, C.5
  • 6
    • 79951843066 scopus 로고    scopus 로고
    • Biotechnological strategies to overcome inhibitors in lignocellulose hydrolysates for ethanol production: review
    • Parawira W, Tekere M, (2011) Biotechnological strategies to overcome inhibitors in lignocellulose hydrolysates for ethanol production: review. Crit Rev Biotechnol 31: 20-31.
    • (2011) Crit Rev Biotechnol , vol.31 , pp. 20-31
    • Parawira, W.1    Tekere, M.2
  • 7
    • 45149104923 scopus 로고    scopus 로고
    • Genome-wide screening of the genes required for tolerance to vanillin, which is a potential inhibitor of bioethanol fermentation, in Saccharomyces cerevisiae
    • Endo A, Nakamura T, Ando A, Tokuyasu K, Shima J, (2008) Genome-wide screening of the genes required for tolerance to vanillin, which is a potential inhibitor of bioethanol fermentation, in Saccharomyces cerevisiae. Biotechnol Biofuels 1: 3.
    • (2008) Biotechnol Biofuels , vol.1 , pp. 3
    • Endo, A.1    Nakamura, T.2    Ando, A.3    Tokuyasu, K.4    Shima, J.5
  • 8
    • 69949164861 scopus 로고    scopus 로고
    • Involvement of ergosterol in tolerance to vanillin, a potential inhibitor of bioethanol fermentation, in Saccharomyces cerevisiae
    • Endo A, Nakamura T, Shima J, (2009) Involvement of ergosterol in tolerance to vanillin, a potential inhibitor of bioethanol fermentation, in Saccharomyces cerevisiae. FEMS Microbiol Lett 299: 95-99.
    • (2009) FEMS Microbiol Lett , vol.299 , pp. 95-99
    • Endo, A.1    Nakamura, T.2    Shima, J.3
  • 9
    • 83055187798 scopus 로고    scopus 로고
    • Identification of candidate genes for yeast engineering to improve bioethanol production in very high gravity and lignocellulosic biomass industrial fermentations
    • Pereira FB, Guimaraes PM, Gomes DG, Mira NP, Teixeira MC, et al. (2011) Identification of candidate genes for yeast engineering to improve bioethanol production in very high gravity and lignocellulosic biomass industrial fermentations. Biotechnol Biofuels 4: 57.
    • (2011) Biotechnol Biofuels , vol.4 , pp. 57
    • Pereira, F.B.1    Guimaraes, P.M.2    Gomes, D.G.3    Mira, N.P.4    Teixeira, M.C.5
  • 10
    • 84857923356 scopus 로고    scopus 로고
    • Determining the mode of action of bioactive compounds
    • Azad MA, Wright GD, (2012) Determining the mode of action of bioactive compounds. Bioorg Med Chem 20: 1929-1939.
    • (2012) Bioorg Med Chem , vol.20 , pp. 1929-1939
    • Azad, M.A.1    Wright, G.D.2
  • 11
    • 77956320714 scopus 로고    scopus 로고
    • High-content, image-based screening for drug targets in yeast
    • Ohnuki S, Oka S, Nogami S, Ohya Y, (2010) High-content, image-based screening for drug targets in yeast. PLoS One 5: e10177.
    • (2010) PLoS One , vol.5
    • Ohnuki, S.1    Oka, S.2    Nogami, S.3    Ohya, Y.4
  • 12
    • 66249103703 scopus 로고    scopus 로고
    • RNA granules: post-transcriptional and epigenetic modulators of gene expression
    • Anderson P, Kedersha N, (2009) RNA granules: post-transcriptional and epigenetic modulators of gene expression. Nat Rev Mol Cell Biol 10: 430-436.
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 430-436
    • Anderson, P.1    Kedersha, N.2
  • 13
    • 66049158810 scopus 로고    scopus 로고
    • Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs
    • Balagopal V, Parker R, (2009) Polysomes, P bodies and stress granules: states and fates of eukaryotic mRNAs. Curr Opin Cell Biol 21: 403-408.
    • (2009) Curr Opin Cell Biol , vol.21 , pp. 403-408
    • Balagopal, V.1    Parker, R.2
  • 14
    • 72149095755 scopus 로고    scopus 로고
    • Eukaryotic stress granules: the ins and outs of translation
    • Buchan JR, Parker R, (2009) Eukaryotic stress granules: the ins and outs of translation. Mol Cell 36: 932-941.
    • (2009) Mol Cell , vol.36 , pp. 932-941
    • Buchan, J.R.1    Parker, R.2
  • 16
    • 84859620639 scopus 로고    scopus 로고
    • Analysis of the biological activity of a novel 24-membered macrolide JBIR-19 in Saccharomyces cerevisiae by the morphological imaging program CalMorph
    • Ohnuki S, Kobayashi T, Ogawa H, Kozone I, Ueda JY, et al. (2012) Analysis of the biological activity of a novel 24-membered macrolide JBIR-19 in Saccharomyces cerevisiae by the morphological imaging program CalMorph. FEMS Yeast Res 12: 293-304.
    • (2012) FEMS Yeast Res , vol.12 , pp. 293-304
    • Ohnuki, S.1    Kobayashi, T.2    Ogawa, H.3    Kozone, I.4    Ueda, J.Y.5
  • 17
  • 18
    • 0020529962 scopus 로고
    • Transformation of intact yeast cells treated with alkali cations
    • Ito H, Fukuda Y, Murata K, Kimura A, (1983) Transformation of intact yeast cells treated with alkali cations. J Bacteriol 153: 163-168.
    • (1983) J Bacteriol , vol.153 , pp. 163-168
    • Ito, H.1    Fukuda, Y.2    Murata, K.3    Kimura, A.4
  • 19
    • 0038131426 scopus 로고    scopus 로고
    • Analysis of the inhibition of food spoilage yeasts by vanillin
    • Fitzgerald DJ, Stratford M, Narbad A, (2003) Analysis of the inhibition of food spoilage yeasts by vanillin. Int J Food Microbiol 86: 113-122.
    • (2003) Int J Food Microbiol , vol.86 , pp. 113-122
    • Fitzgerald, D.J.1    Stratford, M.2    Narbad, A.3
  • 20
    • 18444393975 scopus 로고    scopus 로고
    • Translation of aberrant mRNAs lacking a termination codon or with a shortened 3′-UTR is repressed after initiation in yeast
    • Inada T, Aiba H, (2005) Translation of aberrant mRNAs lacking a termination codon or with a shortened 3′-UTR is repressed after initiation in yeast. Embo J 24: 1584-1595.
    • (2005) Embo J , vol.24 , pp. 1584-1595
    • Inada, T.1    Aiba, H.2
  • 21
    • 36448960911 scopus 로고    scopus 로고
    • Formation of cytoplasmic P-bodies in sake yeast during Japanese sake brewing and wine making
    • Izawa S, Kita T, Ikeda K, Miki T, Inoue Y, (2007) Formation of cytoplasmic P-bodies in sake yeast during Japanese sake brewing and wine making. Biosci Biotechnol Biochem 71: 2800-2807.
    • (2007) Biosci Biotechnol Biochem , vol.71 , pp. 2800-2807
    • Izawa, S.1    Kita, T.2    Ikeda, K.3    Miki, T.4    Inoue, Y.5
  • 22
    • 79954762282 scopus 로고    scopus 로고
    • Severe ethanol stress induces assembly of stress granules in Saccharomyces cerevisiae
    • Kato K, Yamamoto Y, Izawa S, (2011) Severe ethanol stress induces assembly of stress granules in Saccharomyces cerevisiae. Yeast 28: 339-347.
    • (2011) Yeast , vol.28 , pp. 339-347
    • Kato, K.1    Yamamoto, Y.2    Izawa, S.3
  • 23
    • 84865155373 scopus 로고    scopus 로고
    • Acidic stress induces the formation of P-bodies, but not stress granules, with mild attenuation of bulk translation in Saccharomyces cerevisiae
    • Iwaki A, Izawa S, (2012) Acidic stress induces the formation of P-bodies, but not stress granules, with mild attenuation of bulk translation in Saccharomyces cerevisiae. Biochem J 446: 225-233.
    • (2012) Biochem J , vol.446 , pp. 225-233
    • Iwaki, A.1    Izawa, S.2
  • 24
    • 0036182468 scopus 로고    scopus 로고
    • Characterization of the Saccharomyces cerevisiae YMR318C (ADH6) gene product as a broad specificity NADPH-dependent alcohol dehydrogenase: relevance in aldehyde reduction
    • Larroy C, Fernandez MR, Gonzalez E, Pares X, Biosca JA, (2002) Characterization of the Saccharomyces cerevisiae YMR318C (ADH6) gene product as a broad specificity NADPH-dependent alcohol dehydrogenase: relevance in aldehyde reduction. Biochem J 361: 163-172.
    • (2002) Biochem J , vol.361 , pp. 163-172
    • Larroy, C.1    Fernandez, M.R.2    Gonzalez, E.3    Pares, X.4    Biosca, J.A.5
  • 25
    • 0036433309 scopus 로고    scopus 로고
    • Characterization of a Saccharomyces cerevisiae NADP(H)-dependent alcohol dehydrogenase (ADHVII), a member of the cinnamyl alcohol dehydrogenase family
    • Larroy C, Pares X, Biosca JA, (2002) Characterization of a Saccharomyces cerevisiae NADP(H)-dependent alcohol dehydrogenase (ADHVII), a member of the cinnamyl alcohol dehydrogenase family. Eur J Biochem 269: 5738-5745.
    • (2002) Eur J Biochem , vol.269 , pp. 5738-5745
    • Larroy, C.1    Pares, X.2    Biosca, J.A.3
  • 26
    • 12344269924 scopus 로고    scopus 로고
    • TermFinder-open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
    • Boyle EI, Weng S, Gollub J, Jin H, Botstein D, et al. (2004) TermFinder-open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics 20: 3710-3715.
    • (2004) Bioinformatics , vol.20 , pp. 3710-3715
    • Boyle, E.I.1    Weng, S.2    Gollub, J.3    Jin, H.4    Botstein, D.5
  • 28
    • 0034100041 scopus 로고    scopus 로고
    • Glucose depletion rapidly inhibits translation initiation in yeast
    • Ashe MP, De Long SK, Sachs AB, (2000) Glucose depletion rapidly inhibits translation initiation in yeast. Mol Biol Cell 11: 833-848.
    • (2000) Mol Biol Cell , vol.11 , pp. 833-848
    • Ashe, M.P.1    De Long, S.K.2    Sachs, A.B.3
  • 29
    • 15444379718 scopus 로고    scopus 로고
    • Processing bodies require RNA for assembly and contain nontranslating mRNAs
    • Teixeira D, Sheth U, Valencia-Sanchez MA, Brengues M, Parker R, (2005) Processing bodies require RNA for assembly and contain nontranslating mRNAs. Rna 11: 371-382.
    • (2005) Rna , vol.11 , pp. 371-382
    • Teixeira, D.1    Sheth, U.2    Valencia-Sanchez, M.A.3    Brengues, M.4    Parker, R.5
  • 30
    • 56149086182 scopus 로고    scopus 로고
    • P bodies promote stress granule assembly in Saccharomyces cerevisiae
    • Buchan JR, Muhlrad D, Parker R, (2008) P bodies promote stress granule assembly in Saccharomyces cerevisiae. J Cell Biol 183: 441-455.
    • (2008) J Cell Biol , vol.183 , pp. 441-455
    • Buchan, J.R.1    Muhlrad, D.2    Parker, R.3
  • 31
    • 35348858911 scopus 로고    scopus 로고
    • Cell-based high-content screening of small-molecule libraries
    • Korn K, Krausz E, (2007) Cell-based high-content screening of small-molecule libraries. Curr Opin Chem Biol 11: 503-510.
    • (2007) Curr Opin Chem Biol , vol.11 , pp. 503-510
    • Korn, K.1    Krausz, E.2
  • 32
    • 67650070045 scopus 로고    scopus 로고
    • Multi-parameter phenotypic profiling: using cellular effects to characterize small-molecule compounds
    • Feng Y, Mitchison TJ, Bender A, Young DW, Tallarico JA, (2009) Multi-parameter phenotypic profiling: using cellular effects to characterize small-molecule compounds. Nat Rev Drug Discov 8: 567-578.
    • (2009) Nat Rev Drug Discov , vol.8 , pp. 567-578
    • Feng, Y.1    Mitchison, T.J.2    Bender, A.3    Young, D.W.4    Tallarico, J.A.5
  • 34
    • 0141974936 scopus 로고    scopus 로고
    • Vanillins-a novel family of DNA-PK inhibitors
    • Durant S, Karran P, (2003) Vanillins-a novel family of DNA-PK inhibitors. Nucleic Acids Res 31: 5501-5512.
    • (2003) Nucleic Acids Res , vol.31 , pp. 5501-5512
    • Durant, S.1    Karran, P.2
  • 35
    • 84865715286 scopus 로고    scopus 로고
    • Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress
    • Tkach JM, Yimit A, Lee AY, Riffle M, Costanzo M, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14: 966-976.
    • (2012) Nat Cell Biol , vol.14 , pp. 966-976
    • Tkach, J.M.1    Yimit, A.2    Lee, A.Y.3    Riffle, M.4    Costanzo, M.5
  • 36
    • 0030886172 scopus 로고    scopus 로고
    • Rpp1, an essential protein subunit of nuclear RNase P required for processing of precursor tRNA and 35S precursor rRNA in Saccharomyces cerevisiae
    • Stolc V, Altman S, (1997) Rpp1, an essential protein subunit of nuclear RNase P required for processing of precursor tRNA and 35S precursor rRNA in Saccharomyces cerevisiae. Genes Dev 11: 2926-2937.
    • (1997) Genes Dev , vol.11 , pp. 2926-2937
    • Stolc, V.1    Altman, S.2
  • 37
    • 0037135134 scopus 로고    scopus 로고
    • Systematic identification of pathways that couple cell growth and division in yeast
    • Jorgensen P, Nishikawa JL, Breitkreutz BJ, Tyers M, (2002) Systematic identification of pathways that couple cell growth and division in yeast. Science 297: 395-400.
    • (2002) Science , vol.297 , pp. 395-400
    • Jorgensen, P.1    Nishikawa, J.L.2    Breitkreutz, B.J.3    Tyers, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.