Transcriptome profile of bovine elongated conceptus obtained from SCNT and IVP pregnancies

Molecular Reproduction and Development

Volumn 80, Issue 4, 2013, Pages 315-333

  Betsha, Simret ^a   Hoelker, Michael ^a   Salilew Wondim, Dessie ^a   Held, Eva ^a   Rings, Franka ^a   Große Brinkhause, Christine ^a   Cinar, Mehmet Ulas ^a   Havlicek, Vitea ^b   Besenfelder, Urban ^b   Tholen, Ernst ^a   Looft, Christian ^a   Schellander, Karl ^a   Tesfaye, Dawit ^a  

^a UNIVERSITY OF BONN   (Germany)

^b UNIVERSITY OF VETERINARY MEDICINE   (Austria)

Author keywords

Elongated embryos; Gene expression; Transcriptional reprogramming

Indexed keywords

ARGININE; CLOPROSTENOL; FATTY ACID; GLYCEROLIPID; PROLINE; TRANSCRIPTOME;

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; ARTIFICIAL INSEMINATION; BLASTOCYST; CELL TRANSFER; COMPARATIVE STUDY; CONTROLLED STUDY; EMBRYO; EMBRYO TRANSFER; FATTY ACID METABOLISM; FEMALE; FERTILIZATION IN VITRO; FIBROBLAST; GENE EXPRESSION; HEIFER; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; NUCLEAR REPROGRAMMING; PREGNANCY; PRIORITY JOURNAL; RECIPIENT; RNA ANALYSIS; SOMATIC CELL;

ANIMALS; BLASTOCYST; CATTLE; CLONING, ORGANISM; FETAL DEVELOPMENT; GENE EXPRESSION REGULATION, DEVELOPMENTAL; NUCLEAR TRANSFER TECHNIQUES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS;

BOVINAE;

EID: 84876419193     PISSN: 1040452X     EISSN: 10982795     Source Type: Journal    
DOI: 10.1002/mrd.22165     Document Type: Article

References (70)

1. Akyuz B, Ertugrul O, Kaymaz M, Macun HC, Bayram D. 2010. The effectiveness of gender determination using polymerase chain reaction and radioimmunoassay methods in cattle. Theriogenology 73:261-266.
2. Alexopoulos NI, Maddox-Hyttel P, Tveden-Nyborg P, D'Cruz NT, Tecirlioglu TR, Cooney MA, Schauser K, Holland MK, French AJ. 2008. Developmental disparity between in vitro-produced and somatic cell nuclear transfer bovine days 14 and 21 embryos: Implications for embryonic loss. Reproduction 136:433-445.
3. Arman E, Haffner-Krausz R, Chen Y, Heath JK, Lonai P. 1998. Targeted disruption of fibroblast growth factor (FGF) receptor 2 suggests a role for FGF signaling in pregastrulation mammalian development. Proc Natl Acad Sci USA 95:5082-5087.
4. Arnold DR, Bordignon V, Lefebvre R, Murphy BD, Smith LC. 2006. Somatic cell nuclear transfer alters peri-implantation trophoblast differentiation in bovine embryos. Reproduction 132:279-290.
5. Bauersachs S, Ulbrich SE, Zakhartchenko V, Minten M, Reichenbach M, Reichenbach HD, Blum H, Spencer TE, Wolf E. 2009. The endometrium responds differently to cloned versus fertilized embryos. Proc Natl Acad Sci USA 106:5681-5686.
6. Begay V, Smink J, Leutz A. 2004. Essential requirement of CCAAT/enhancer binding proteins in embryogenesis. Mol Cell Biol 24:9744-9751.
7. Beyhan Z, Ross PJ, Iager AE, Kocabas AM, Cunniff K, Rosa GJ, Cibelli JB. 2007. Transcriptional reprogramming of somatic cell nuclei during preimplantation development of cloned bovine embryos. Dev Biol 305:637-649.
8. Blomberg L, Hashizume K, Viebahn C. 2008. Blastocyst elongation, trophoblastic differentiation, and embryonic pattern formation. Reproduction 135:181-195.
9. Chavatte-Palmer P, Camous S, Jammes H, Le Cleac'h N, Guillomot M, Lee RS. 2012. Review: Placental perturbations induce the developmental abnormalities often observed in bovine somatic cell nuclear transfer. Placenta 33:S99-S104.
10. Choi YH, Lee BC, Lim JM, Kang SK, Hwang WS. 2002. Optimization of culture medium for cloned bovine embryos and its influence on pregnancy and delivery outcome. Theriogenology 58:1187-1197.
11. Chung YG, Mann MR, Bartolomei MS, Latham KE. 2002. Nuclear-cytoplasmic "tug of war" during cloning: Effects of somatic cell nuclei on culture medium preferences of preimplantation cloned mouse embryos. Biol Reprod 66:1178-1184.
12. Clemente M, Lopez-Vidriero I, O'Gaora P, Mehta JP, Forde N, Gutierrez-Adan A, Lonergan P, Rizos D. 2011. Transcriptome changes at the initiation of elongation in the bovine conceptus. Biol Reprod 85:285-295.
13. Cooke FN, Pennington KA, Yang Q, Ealy AD. 2009. Several fibroblast growth factors are expressed during pre-attachment bovine conceptus development and regulate interferon-tau expression from trophectoderm. Reproduction 137:259-269.
14. de A Camargo LS, Powell AM, do Vale Filho VR, Wall RJ. 2005. Comparison of gene expression in individual preimplantation bovine embryos produced by in vitro fertilisation or somatic cell nuclear transfer. Reprod Fertil Dev 17:487-496.
15. Dean W, Santos F, Stojkovic M, Zakhartchenko V, Walter J, Wolf E, Reik W. 2001. Conservation of methylation reprogramming in mammalian development: Aberrant reprogramming in cloned embryos. Proc Natl Acad Sci USA 98:13734-13738.
16. del Monaco S, Assef Y, Kotsias BA. 2008. Epithelial sodium channel in a human trophoblast cell line (BeWo). J Membr Biol 223:127-139.
17. El-Sayed A, Hoelker M, Rings F, Salilew D, Jennen D, Tholen E, Sirard MA, Schellander K, Tesfaye D. 2006. Large-scale transcriptional analysis of bovine embryo biopsies in relation to pregnancy success after transfer to recipients. Physiol Genomics 28:84-96.
18. Enright BP, Jeong BS, Yang X, Tian XC. 2003. Epigenetic characteristics of bovine donor cells for nuclear transfer: Levels of histone acetylation. Biol Reprod 69:1525-1530.
19. Farin CE, Imakawa K, Hansen TR, McDonnell JJ, Murphy CN, Farin PW, Roberts RM. 1990. Expression of trophoblastic interferon genes in sheep and cattle. Biol Reprod 43:210-218.
20. Farin PW, Farin CE. 1995. Transfer of bovine embryos produced in vivo or in vitro: Survival and fetal development. Biol Reprod 52:676-682.
21. Forde N, Carter F, Spencer TE, Bazer FW, Sandra O, Mansouri-Attia N, Okumu LA, McGettigan PA, Mehta JP, McBride R, O'Gaora P, Roche JF, Lonergan P. 2011. Conceptus-induced changes in the endometrial transcriptome: How soon does the cow know she is pregnant? Biol Reprod 85:144-156.
22. Forsberg EJ, Strelchenko NS, Augenstein ML, Betthauser JM, Childs LA, Eilertsen KJ, Enos JM, Forsythe TM, Golueke PJ, Koppang RW, Lange G, Lesmeister TL, Mallon KS, Mell GD, Misica PM, Pace MM, Pfister-Genskow M, Voelker GR, Watt SR, Bishop MD. 2002. Production of cloned cattle from in vitro systems. Biol Reprod 67:327-333.
23. Gabriel HD, Jung D, Butzler C, Temme A, Traub O, Winterhager E, Willecke K. 1998. Transplacental uptake of glucose is decreased in embryonic lethal connexin26-deficient mice. J Cell Biol 140:1453-1461.
24. Gallagher PJ, Garcia JG, Herring BP. 1995. Expression of a novel myosin light chain kinase in embryonic tissues and cultured cells. J Biol Chem 270:29090-29095.
25. Godkin JD, Bazer FW, Lewis GS, Geisert RD, Roberts RM. 1982. Synthesis and release of polypeptides by pig conceptuses during the period of blastocyst elongation and attachment. Biol Reprod 27:977-987.
26. Grealy M, Diskin MG, Sreenan JM. 1996. Protein content of cattle oocytes and embryos from the two-cell to the elongated blastocyst stage at day 16. J Reprod Fertil 107:229-233.
27. Gregersen LH, Jacobsen AB, Frankel LB, Wen J, Krogh A, Lund AH. 2010. MicroRNA-145 targets YES and STAT1 in colon cancer cells. PLoS ONE 5:e8836.
28. Han DW, Song SJ, Uhum SJ, Do JT, Kim NH, Chung KS, Lee HT. 2003. Expression of IGF2 and IGF receptor mRNA in bovine nuclear transferred embryos. Zygote 11:245-252.
29. Han Z, Vassena R, Chi MM, Potireddy S, Sutovsky M, Moley KH, Sutovsky P, Latham KE. 2008. Role of glucose in cloned mouse embryo development. Am J Physiol Endocrinol Metab 295:E798-E809.
30. Heyman Y. 2005. Nuclear transfer: A new tool for reproductive biotechnology in cattle. Reprod Nutr Dev 45:353-361.
31. Heyman Y, Chavatte-Palmer P, LeBourhis D, Camous S, Vignon X, Renard JP. 2002. Frequency and occurrence of late-gestation losses from cattle cloned embryos. Biol Reprod 66:6-13.
32. Hochedlinger K, Jaenisch R. 2003. Nuclear transplantation, embryonic stem cells, and the potential for cell therapy. N Engl J Med 349:275-286.
33. Hossain MM. 2010. MicroRNAs in the bovine ovary and placentas derived from in vivo, in vitro and nuclear transfer pregnancies (PhD thesis). Bonn. 198 p.
34. Kim HR, Han RX, Wakayama T, Park CS, Jin DI. 2010. Aberrant protein expression in the placenta of cloned mouse derived from embryonic stem cell. Placenta 31:853-859.
35. Kim HR, Kang JK, Yoon JT, Seong HH, Jung JK, Lee HM, Sik Park C, Jin DI. 2005. Protein profiles of bovine placenta derived from somatic cell nuclear transfer. Proteomics 5:4264-4273.
36. Kimura K, Spate LD, Green MP, Murphy CN, Seidel GE, Jr., Roberts RM. 2004. Sexual dimorphism in interferon-tau production by in vivo-derived bovine embryos. Mol Reprod Dev 67:193-199.
37. Kruip TAM, Den Daas JHG. 1997. In vitro produced and cloned embryos: Effects on pregnancy, parturition and offspring. Theriogenology 47:43-52.
38. Li X, Amarnath D, Kato Y, Tsunoda Y. 2006. Analysis of development-related gene expression in cloned bovine blastocysts with different developmental potential. Cloning Stem Cells 8:41-50.
39. Liu L, Shin T, Pryor JH, Kraemer D, Westhusin M. 2001. Regenerated bovine fetal fibroblasts support high blastocyst development following nuclear transfer. Cloning 3:51-58.
40. MacLean JA II, Chakrabarty A, Xie S, Bixby JA, Roberts RM, Green JA. 2003. Family of Kunitz proteins from trophoblast: Expression of the trophoblast Kunitz domain proteins (TKDP) in cattle and sheep. Mol Reprod Dev 65:30-40.
41. Mann GE, Lamming GE, Robinson RS, Wathes DC. 1999. The regulation of interferon-tau production and uterine hormone receptors during early pregnancy. J Reprod Fertil Suppl 54:317-328.
42. Mansouri-Attia N, Sandra O, Aubert J, Degrelle S, Everts RE, Giraud-Delville C, Heyman Y, Galio L, Hue I, Yang X, Tian XC, Lewin HA, Renard JP. 2009. Endometrium as an early sensor of in vitro embryo manipulation technologies. Proc Natl Acad Sci USA 106:5687-5692.
43. Meisler MH, Barrow LL, Canessa CM, Rossier BC. 1994. SCNN1, an epithelial cell sodium channel gene in the conserved linkage group on mouse chromosome 6 and human chromosome 12. Genomics 24:185-186.
44. Pfister-Genskow M, Myers C, Childs LA, Lacson JC, Patterson T, Betthauser JM, Goueleke PJ, Koppang RW, Lange G, Fisher P, Watt SR, Forsberg EJ, Zheng Y, Leno GH, Schultz RM, Liu B, Chetia C, Yang X, Hoeschele I, Eilertsen KJ. 2005. Identification of differentially expressed genes in individual bovine preimplantation embryos produced by nuclear transfer: Improper reprogramming of genes required for development. Biol Reprod 72:546-555.
45. Piedrahita JA, Oetama B, Bennett GD, van Waes J, Kamen BA, Richardson J, Lacey SW, Anderson RG, Finnell RH. 1999. Mice lacking the folic acid-binding protein Folbp1 are defective in early embryonic development. Nat Genet 23:228-232.
46. Pirity MK, Locker J, Schreiber-Agus N. 2005. Rybp/DEDAF is required for early postimplantation and for central nervous system development. Mol Cell Biol 25:7193-7202.
47. Pirity MK, Wang WL, Wolf LV, Tamm ER, Schreiber-Agus N, Cvekl A. 2007. Rybp, a polycomb complex-associated protein, is required for mouse eye development. BMC Dev Biol 7:39.
48. Purcell SH, Cantlon JD, Wright CD, Henkes LE, Seidel GE, Jr., Anthony RV. 2009. The involvement of proline-rich 15 in early conceptus development in sheep. Biol Reprod 81:1112-1121.
49. Rodriguez-Alvarez L, Sharbati J, Sharbati S, Cox JF, Einspanier R, Castro FO. 2010. Differential gene expression in bovine elongated (Day 17) embryos produced by somatic cell nucleus transfer and in vitro fertilization. Theriogenology 74:45-59.
50. Rodriguez-Osorio N, Wang Z, Kasinathan P, Page GP, Robl JM, Memili E. 2009. Transcriptional reprogramming of gene expression in bovine somatic cell chromatin transfer embryos. BMC Genomics 10:190.
51. Salilew-Wondim D, Tesfaye D, Hossain M, Held E, Rings F, Tholen E, Looft C, Schellander K, Hoelker M. 2012. Aberrant placenta gene expression pattern in bovine pregnancies established after transfer of cloned or in vitro produced embryos. Physiol Genomics 45:28-46.
52. Satterfield MC, Dunlap KA, Hayashi K, Burghardt RC, Spencer TE, Bazer FW. 2007. Tight and adherens junctions in the ovine uterus: Differential regulation by pregnancy and progesterone. Endocrinology 148:3922-3931.
53. Sawai K. 2009. Studies on gene expression in bovine embryos derived from somatic cell nuclear transfer. J Reprod Dev 55:11-16.
54. Smith CS, Berg DK, Berg M, Pfeffer PL. 2010. Nuclear transfer-specific defects are not apparent during the second week of embryogenesis in cattle. Cell Reprogram 12:699-707.
55. Smith SL, Everts RE, Tian XC, Du F, Sung LY, Rodriguez-Zas SL, Jeong BS, Renard JP, Lewin HA, Yang X. 2005. Global gene expression profiles reveal significant nuclear reprogramming by the blastocyst stage after cloning. Proc Natl Acad Sci USA 102:17582-17587.
56. Somers J, Smith C, Donnison M, Wells DN, Henderson H, McLeay L, Pfeffer PL. 2006. Gene expression profiling of individual bovine nuclear transfer blastocysts. Reproduction 131:1073-1084.
57. Song G, Fleming JA, Kim J, Spencer TE, Bazer FW. 2011. Pregnancy and interferon tau regulate DDX58 and PLSCR1 in the ovine uterus during the peri-implantation period. Reproduction 141:127-138.
58. Spencer TE, Bazer FW. 2004. Conceptus signals for establishment and maintenance of pregnancy. Reprod Biol Endocrinol 2:49.
59. Thatcher WW, Guzeloglu A, Mattos R, Binelli M, Hansen TR, Pru JK. 2001. Uterine-conceptus interactions and reproductive failure in cattle. Theriogenology 56:1435-1450.
60. Ulbrich SE, Meyer SU, Zitta K, Hiendleder S, Sinowatz F, Bauersachs S, Buttner M, Frohlich T, Arnold GJ, Reichenbach HD, Wolf E, Meyer HH. 2011. Bovine endometrial metallopeptidases MMP14 and MMP2 and the metallopeptidase inhibitor TIMP2 participate in maternal preparation of pregnancy. Mol Cell Endocrinol 332:48-57.
61. Vesterlund L, Tohonen V, Hovatta O, Kere J. 2011. Co-localization of neural cell adhesion molecule and fibroblast growth factor receptor 2 in early embryo development. Int J Dev Biol 55:313-319.
62. Walker SK, Hartwich KM, Seamark RF. 1996. The production of unusually large offspring following embryo manipulation: Conceptus and challenges. Theriogenology 45:111-120.
63. Whitworth KM, Zhao J, Spate LD, Li R, Prather RS. 2011. Scriptaid corrects gene expression of a few aberrantly reprogrammed transcripts in nuclear transfer pig blastocyst stage embryos. Cell Reprogram 13:191-204.
64. Wilmut I, Sullivan G, Chambers I. 2011. The evolving biology of cell reprogramming. Philos Trans R Soc Lond B Biol Sci 366:2183-2197.
65. Wilson ME, Sonstegard TS, Smith TP, Fahrenkrug SC, Ford SP. 2000. Differential gene expression during elongation in the preimplantation pig embryo. Genesis 26:9-14.
66. Wrenzycki C, Herrmann D, Lucas-Hahn A, Lemme E, Korsawe K, Niemann H. 2004. Gene expression patterns in in vitro-produced and somatic nuclear transfer-derived preimplantation bovine embryos: Relationship to the large offspring syndrome? Anim Reprod Sci 82-83:593-603.
67. Yamanaka K, Sugimura S, Wakai T, Kawahara M, Sato E. 2009. Difference in sensitivity to culture condition between in vitro fertilized and somatic cell nuclear transfer embryos in pigs. J Reprod Dev 55:299-304.
68. Yang L, Chavatte-Palmer P, Kubota C, O'Neill M, Hoagland T, Renard JP, Taneja M, Yang X, Tian XC. 2005. Expression of imprinted genes is aberrant in deceased newborn cloned calves and relatively normal in surviving adult clones. Mol Reprod Dev 71:431-438.
69. Yang XY, Li H, Ma QW, Yan JB, Zhao JG, Li HW, Shen HQ, Liu HF, Huang Y, Huang SZ, Zeng YT, Zeng F. 2006. Improved efficiency of bovine cloning by autologous somatic cell nuclear transfer. Reproduction 132:733-739.
70. Yang X, Smith SL, Tian XC, Lewin HA, Renard JP, Wakayama T. 2007. Nuclear reprogramming of cloned embryos and its implications for therapeutic cloning. Nat Genet 39:295-302.