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Volumn 164, Issue 3, 2013, Pages 323-339

Multigene Phylogenetic Reconstruction of the Tubulinea (Amoebozoa) Corroborates Four of the Six Major Lineages, while Additionally Revealing that Shell Composition Does not Predict Phylogeny in the Arcellinida

Author keywords

Amoebozoa.; Arcellinida; Multigene phylogeny; Testate amoebae; Tubulinea

Indexed keywords

ACTIN; ELONGATION FACTOR 2; PROTEIN 14 3 3; PROTOZOAL DNA; PROTOZOAL PROTEIN; RIBOSOME DNA; TUBULIN;

EID: 84876414131     PISSN: 14344610     EISSN: 16180941     Source Type: Journal    
DOI: 10.1016/j.protis.2013.02.003     Document Type: Article
Times cited : (49)

References (61)
  • 1
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal F., Zardoya R., Posada D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 2005, 21:2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 3
    • 85032069793 scopus 로고
    • The effects of silicate depletion and subsequent replenishment on the cytoplasmic fine structure of the silica-secreting testate amoeba Netzelia tuberculata in laboratory culture
    • Anderson O.R. The effects of silicate depletion and subsequent replenishment on the cytoplasmic fine structure of the silica-secreting testate amoeba Netzelia tuberculata in laboratory culture. J Morphol 1992, 211:285-293.
    • (1992) J Morphol , vol.211 , pp. 285-293
    • Anderson, O.R.1
  • 4
    • 0034602344 scopus 로고    scopus 로고
    • A kingdom-level phylogeny of eukaryotes based on combined protein data
    • Baldauf S.L., Roger A.J., Wenk-Siefert I., Doolittle W.F. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 2000, 290:972-977.
    • (2000) Science , vol.290 , pp. 972-977
    • Baldauf, S.L.1    Roger, A.J.2    Wenk-Siefert, I.3    Doolittle, W.F.4
  • 5
    • 0035207791 scopus 로고    scopus 로고
    • SSU rRNA-based phylogenetic position of the genera Amoeba and Chaos (Lobosea, Gymnamoebia): The origin of Gymnamoebae revisited
    • Bolivar I., Fahrni J.F., Smirnov A., Pawlowski J. SSU rRNA-based phylogenetic position of the genera Amoeba and Chaos (Lobosea, Gymnamoebia): The origin of Gymnamoebae revisited. Mol Biol Evol 2001, 18:2306-2314.
    • (2001) Mol Biol Evol , vol.18 , pp. 2306-2314
    • Bolivar, I.1    Fahrni, J.F.2    Smirnov, A.3    Pawlowski, J.4
  • 7
    • 79952438293 scopus 로고    scopus 로고
    • Slime molds" among the Tubulinea: Molecular systematics and taxonomy of Copromyxa
    • Brown M.W., Silberman J.D., Spiegel F.W. Slime molds" among the Tubulinea: Molecular systematics and taxonomy of Copromyxa. Protist 2011, 162:277-287.
    • (2011) Protist , vol.162 , pp. 277-287
    • Brown, M.W.1    Silberman, J.D.2    Spiegel, F.W.3
  • 8
    • 2942725903 scopus 로고    scopus 로고
    • Molecular phylogeny of Amoebozoa and the evolutionary significance of the unikont Phalansterium
    • Cavalier-Smith T., Chao E.E.Y., Oates B. Molecular phylogeny of Amoebozoa and the evolutionary significance of the unikont Phalansterium. Eur J Protistol 2004, 40:21-48.
    • (2004) Eur J Protistol , vol.40 , pp. 21-48
    • Cavalier-Smith, T.1    Chao, E.E.Y.2    Oates, B.3
  • 9
    • 77950628628 scopus 로고    scopus 로고
    • Saccamoeba lacustris, sp nov (Amoebozoa: Lobosea: Hartmannellidae), a new lobose amoeba, parasitized by the novel chlamydia 'Candidatus Metachlamydia lacustris' (Chlamydiae: Parachlamydiaceae)
    • Corsaro D., Michel R., Walochnik J., Muller K.D., Greub G. Saccamoeba lacustris, sp nov (Amoebozoa: Lobosea: Hartmannellidae), a new lobose amoeba, parasitized by the novel chlamydia 'Candidatus Metachlamydia lacustris' (Chlamydiae: Parachlamydiaceae). Eur J Protistol 2010, 46:86-95.
    • (2010) Eur J Protistol , vol.46 , pp. 86-95
    • Corsaro, D.1    Michel, R.2    Walochnik, J.3    Muller, K.D.4    Greub, G.5
  • 10
    • 79954529507 scopus 로고    scopus 로고
    • ProtTest 3: fast selection of best-fit models of protein evolution
    • Darriba D., Taboada G.L., Doallo R., Posada D. ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 2011, 27:1164-1165.
    • (2011) Bioinformatics , vol.27 , pp. 1164-1165
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 11
    • 77957233168 scopus 로고    scopus 로고
    • Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology
    • Delport W., Poon A.F.Y., Frost S.D.W., Pond S.L.K. Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology. Bioinformatics 2010, 26:2455-2457.
    • (2010) Bioinformatics , vol.26 , pp. 2455-2457
    • Delport, W.1    Poon, A.F.Y.2    Frost, S.D.W.3    Pond, S.L.K.4
  • 12
    • 67650021807 scopus 로고    scopus 로고
    • Morphology and SSU rDNA-based phylogeny of a new strain of Saccamoeba sp (Saccamoeba Frenzel, 1892, Amoebozoa)
    • Dykova I., Kostka M., Peckova H. Morphology and SSU rDNA-based phylogeny of a new strain of Saccamoeba sp (Saccamoeba Frenzel, 1892, Amoebozoa). Acta Protozool 2008, 47:397-405.
    • (2008) Acta Protozool , vol.47 , pp. 397-405
    • Dykova, I.1    Kostka, M.2    Peckova, H.3
  • 13
    • 60749094208 scopus 로고    scopus 로고
    • Phylogeny of Flabellulidae (Amoebozoa: Leptomyxida) inferred from SSU rDNA sequences of the type strain of Flabellula citata Schaeffer, 1926 and newly isolated strains of marine amoebae
    • Dykova I., Fiala I., Peckova H., Dvorakova H. Phylogeny of Flabellulidae (Amoebozoa: Leptomyxida) inferred from SSU rDNA sequences of the type strain of Flabellula citata Schaeffer, 1926 and newly isolated strains of marine amoebae. Folia Parasitol 2008, 55:256-264.
    • (2008) Folia Parasitol , vol.55 , pp. 256-264
    • Dykova, I.1    Fiala, I.2    Peckova, H.3    Dvorakova, H.4
  • 15
    • 0030464460 scopus 로고    scopus 로고
    • SEAVIEW and PHYLO_WIN: Two graphic tools for sequence alignment and molecular phylogeny
    • Galtier N., Gouy M., Gautier C. SEAVIEW and PHYLO_WIN: Two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 1996, 12:543-548.
    • (1996) Comput Appl Biosci , vol.12 , pp. 543-548
    • Galtier, N.1    Gouy, M.2    Gautier, C.3
  • 16
    • 0012388675 scopus 로고
    • Rhizopodes nouveaus du psammon littoral de la Mer Noire (Note préliminaire)
    • Golemansky V. Rhizopodes nouveaus du psammon littoral de la Mer Noire (Note préliminaire). Protistologica 1970, 6:365-371.
    • (1970) Protistologica , vol.6 , pp. 365-371
    • Golemansky, V.1
  • 17
    • 84858705226 scopus 로고    scopus 로고
    • SSU rDNA phylogeny questions the monophyly of Arcellinida (Amoebozoa) and reveals that Difflugia, the largest Arcellinida genus, is paraphyletic
    • Gomaa F., Todorov M., Heger T.J., Mitchell E.A.D., Lara E. SSU rDNA phylogeny questions the monophyly of Arcellinida (Amoebozoa) and reveals that Difflugia, the largest Arcellinida genus, is paraphyletic. Protist 2012, 163:389-399.
    • (2012) Protist , vol.163 , pp. 389-399
    • Gomaa, F.1    Todorov, M.2    Heger, T.J.3    Mitchell, E.A.D.4    Lara, E.5
  • 18
    • 74549125386 scopus 로고    scopus 로고
    • SeaView Version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
    • Gouy M., Guindon S., Gascuel O. SeaView Version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 2010, 27:221-224.
    • (2010) Mol Biol Evol , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 19
    • 62649113993 scopus 로고    scopus 로고
    • Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic " supergroups"
    • Hampl V., Hug L., Leigh J.W., Dacks J.B., Lang B.F., Simpson A.G.B., Roger A.J. Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic " supergroups" . Proc Natl Acad Sci USA 2009, 106:3859-3864.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 3859-3864
    • Hampl, V.1    Hug, L.2    Leigh, J.W.3    Dacks, J.B.4    Lang, B.F.5    Simpson, A.G.B.6    Roger, A.J.7
  • 20
    • 68049142320 scopus 로고    scopus 로고
    • Multiple alignment of DNA sequences with MAFFT
    • Katoh K., Asimenos G., Toh H. Multiple alignment of DNA sequences with MAFFT. Methods Mol Biol 2009, 537:39-64.
    • (2009) Methods Mol Biol , vol.537 , pp. 39-64
    • Katoh, K.1    Asimenos, G.2    Toh, H.3
  • 21
    • 84858700238 scopus 로고    scopus 로고
    • COI barcoding of nebelid testate amoebae (Amoebozoa:Arcellinida): extensive pseudocryptic diversity and redefinition of the Hyalospheniidae Schultze
    • Kosakyan A., Heger T.J., Leander B.S., Todorov M., Mitchell E.A.D., Lara E. COI barcoding of nebelid testate amoebae (Amoebozoa:Arcellinida): extensive pseudocryptic diversity and redefinition of the Hyalospheniidae Schultze. Protist 2012, 163:415-434.
    • (2012) Protist , vol.163 , pp. 415-434
    • Kosakyan, A.1    Heger, T.J.2    Leander, B.S.3    Todorov, M.4    Mitchell, E.A.D.5    Lara, E.6
  • 22
    • 70350519855 scopus 로고    scopus 로고
    • Description and phylogenetic relationships of Spumochlamys perforata n. sp and Spumochlamys bryora n. sp (Amoebozoa, Arcellinida)
    • Kudryavtsev A., Pawlowski J., Hausmann K. Description and phylogenetic relationships of Spumochlamys perforata n. sp and Spumochlamys bryora n. sp (Amoebozoa, Arcellinida). J Eukaryot Microbiol 2009, 56:495-503.
    • (2009) J Eukaryot Microbiol , vol.56 , pp. 495-503
    • Kudryavtsev, A.1    Pawlowski, J.2    Hausmann, K.3
  • 23
    • 75549083380 scopus 로고    scopus 로고
    • Reducing the impact of PCR-mediated recombination in molecular evolution and environmental studies using a new-generation high-fidelity DNA polymerase
    • Lahr D.J.G., Katz L.A. Reducing the impact of PCR-mediated recombination in molecular evolution and environmental studies using a new-generation high-fidelity DNA polymerase. Biotechniques 2009, 47:857-866.
    • (2009) Biotechniques , vol.47 , pp. 857-866
    • Lahr, D.J.G.1    Katz, L.A.2
  • 24
    • 33644596824 scopus 로고    scopus 로고
    • Morphology, biometry, ecology and biogeography of five species of Difflugia Leclerc, 1815 (Arcellinida: Difflugiidae), from Tiete River, Brazil
    • Lahr D.J.G., Lopes S.G.B.C. Morphology, biometry, ecology and biogeography of five species of Difflugia Leclerc, 1815 (Arcellinida: Difflugiidae), from Tiete River, Brazil. Acta Protozool 2006, 45:77-90.
    • (2006) Acta Protozool , vol.45 , pp. 77-90
    • Lahr, D.J.G.1    Lopes, S.G.B.C.2
  • 25
    • 54249092694 scopus 로고    scopus 로고
    • Ultrastructure and biometry of three lobose testate amoebae of the family Lesquereusiidae (Tubulinea: Arcellinida) based on specimens from Sao Paulo, Brazil
    • Lahr D.J.G., Lopes S.G.B.C. Ultrastructure and biometry of three lobose testate amoebae of the family Lesquereusiidae (Tubulinea: Arcellinida) based on specimens from Sao Paulo, Brazil. Acta Protozool 2007, 46:339-348.
    • (2007) Acta Protozool , vol.46 , pp. 339-348
    • Lahr, D.J.G.1    Lopes, S.G.B.C.2
  • 26
    • 79958255853 scopus 로고    scopus 로고
    • Occurrence of the lobose testate amoeba Pseudonebela africana (Amoebozoa, Arcellinida) in the Brazilian " cerrado"
    • Lahr D.J.G., Souza M.B.Ge Occurrence of the lobose testate amoeba Pseudonebela africana (Amoebozoa, Arcellinida) in the Brazilian " cerrado" . Eur J Protistol 2011, 47:231-234.
    • (2011) Eur J Protistol , vol.47 , pp. 231-234
    • Lahr, D.J.G.1    Souza, M.2
  • 27
    • 78650467109 scopus 로고    scopus 로고
    • Evolution of the actin gene family in testate lobose amoebae (Arcellinida) is characterized by 2 distinct clades of paralogs and recent independent expansions
    • Lahr D.J., Nguyen T.B., Barbero E., Katz L.A. Evolution of the actin gene family in testate lobose amoebae (Arcellinida) is characterized by 2 distinct clades of paralogs and recent independent expansions. Mol Biol Evol 2010, 28:223-236.
    • (2010) Mol Biol Evol , vol.28 , pp. 223-236
    • Lahr, D.J.1    Nguyen, T.B.2    Barbero, E.3    Katz, L.A.4
  • 28
    • 79960855196 scopus 로고    scopus 로고
    • Comprehensive phylogenetic reconstruction of Amoebozoa based on concatenated analyses of SSU rDNA and actin genes
    • Lahr D.J.G., Grant J., Nguyen T.B., Lin J.H., Katz L.A. Comprehensive phylogenetic reconstruction of Amoebozoa based on concatenated analyses of SSU rDNA and actin genes. PloS ONE 2011, 6(7):e22780.
    • (2011) PloS ONE , vol.6 , Issue.7
    • Lahr, D.J.G.1    Grant, J.2    Nguyen, T.B.3    Lin, J.H.4    Katz, L.A.5
  • 29
    • 41049112741 scopus 로고    scopus 로고
    • Ribosomal RNA genes challenge the monophyly of the Hyalospheniidae (Amoebozoa: Arcellinida)
    • Lara E., Heger T.J., Ekelund F., Lamentowicz M., Mitchell E.A.D. Ribosomal RNA genes challenge the monophyly of the Hyalospheniidae (Amoebozoa: Arcellinida). Protist 2008, 159:165-176.
    • (2008) Protist , vol.159 , pp. 165-176
    • Lara, E.1    Heger, T.J.2    Ekelund, F.3    Lamentowicz, M.4    Mitchell, E.A.D.5
  • 30
    • 0024241467 scopus 로고
    • The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
    • Medlin L., Elwood H.J., Stickel S., Sogin M.L. The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 1988, 71:491-499.
    • (1988) Gene , vol.71 , pp. 491-499
    • Medlin, L.1    Elwood, H.J.2    Stickel, S.3    Sogin, M.L.4
  • 31
    • 0012169292 scopus 로고    scopus 로고
    • Order Arcellinida Kent, 1880
    • Allen Press, Lawrence, Kansas, USA, J.J. Lee, G.F. Leedale, P. Bradbury (Eds.)
    • Meisterfeld R. Order Arcellinida Kent, 1880. The Illustrated Guide to the Protozoa 2002, 827-860. Allen Press, Lawrence, Kansas, USA. 2nd ed. J.J. Lee, G.F. Leedale, P. Bradbury (Eds.).
    • (2002) The Illustrated Guide to the Protozoa , pp. 827-860
    • Meisterfeld, R.1
  • 33
    • 22744451631 scopus 로고    scopus 로고
    • The testate lobose amoebae (Order Arcellinida Kent, 1880) finally find their home within Amoebozoa
    • Nikolaev SI, D. Mitchell EA, Petrov NB, Berney C, Fahrni J, Pawlowski J. (2005) The testate lobose amoebae (Order Arcellinida Kent, 1880) finally find their home within Amoebozoa. Protist 156:191-202.
    • (2005) Protist , vol.156 , pp. 191-202
    • Nikolaev, S.I.D.1    Mitchell, E.A.2    Petrov, N.B.3    Berney, C.4    Fahrni, J.5    Pawlowski, J.6
  • 34
    • 0344372511 scopus 로고
    • Siliceous structures secreted by members of the subclass Lobosia (Rhizopodea:Protozoa)
    • Ogden C.G. Siliceous structures secreted by members of the subclass Lobosia (Rhizopodea:Protozoa). Bull Br Mus Nat Hist (Zool) 1979, 36:203-207.
    • (1979) Bull Br Mus Nat Hist (Zool) , vol.36 , pp. 203-207
    • Ogden, C.G.1
  • 35
    • 0014115498 scopus 로고
    • Taxonomic criteria for limax amoebae, with descriptions of 3 new species of Hartmannella and 3 of Vahlkampfia
    • Page F.C. Taxonomic criteria for limax amoebae, with descriptions of 3 new species of Hartmannella and 3 of Vahlkampfia. J Eukaryot Microbiol 1967, 14:499-521.
    • (1967) J Eukaryot Microbiol , vol.14 , pp. 499-521
    • Page, F.C.1
  • 36
    • 0007711428 scopus 로고
    • New family of amebas with fine pseudopodia
    • Page F.C. New family of amebas with fine pseudopodia. Zool J Linn Soc 1975, 56:73-89.
    • (1975) Zool J Linn Soc , vol.56 , pp. 73-89
    • Page, F.C.1
  • 37
    • 0003123823 scopus 로고
    • A light-microscopical and electron-microscopical comparison of limax and flabellate marine amebas belonging to 4 genera
    • Page F.C. A light-microscopical and electron-microscopical comparison of limax and flabellate marine amebas belonging to 4 genera. Protistologica 1980, 16:57-78.
    • (1980) Protistologica , vol.16 , pp. 57-78
    • Page, F.C.1
  • 38
    • 0003962863 scopus 로고
    • Institute of Terrestrial Ecology, Cambridge, UK
    • Page F.C. Marine Gymnamoebae 1983, Institute of Terrestrial Ecology, Cambridge, UK.
    • (1983) Marine Gymnamoebae
    • Page, F.C.1
  • 39
    • 0001344330 scopus 로고
    • The Classification of Naked Amebas (Phylum-Rhizopoda)
    • Page F.C. The Classification of Naked Amebas (Phylum-Rhizopoda). Arch Protistenkd 1987, 133:199-217.
    • (1987) Arch Protistenkd , vol.133 , pp. 199-217
    • Page, F.C.1
  • 41
    • 61849133515 scopus 로고    scopus 로고
    • Untangling the phylogeny of amoeboid protists
    • Pawlowski J., Burki F. Untangling the phylogeny of amoeboid protists. J Eukaryot Microbiol 2009, 56:16-25.
    • (2009) J Eukaryot Microbiol , vol.56 , pp. 16-25
    • Pawlowski, J.1    Burki, F.2
  • 43
    • 0242354974 scopus 로고    scopus 로고
    • Horizontal gene transfer and phylogenetics
    • Philippe H., Douady C.J. Horizontal gene transfer and phylogenetics. Curr Opin Microbiol 2003, 6:498-505.
    • (2003) Curr Opin Microbiol , vol.6 , pp. 498-505
    • Philippe, H.1    Douady, C.J.2
  • 44
    • 0033793142 scopus 로고    scopus 로고
    • Testate amoebae in the Neoproterozoic Era: Evidence from vase-shaped microfossils in the Chuar Group, Grand Canyon
    • Porter S.M., Knoll A.H. Testate amoebae in the Neoproterozoic Era: Evidence from vase-shaped microfossils in the Chuar Group, Grand Canyon. Paleobiology 2000, 26:360-385.
    • (2000) Paleobiology , vol.26 , pp. 360-385
    • Porter, S.M.1    Knoll, A.H.2
  • 45
    • 0037534127 scopus 로고    scopus 로고
    • Vase-shaped microfossils from the Neoproterozoic Chuar Group, Grand Canyon: A classification guided by modern testate amoebae
    • Porter S.M., Meisterfeld R., Knoll A.H. Vase-shaped microfossils from the Neoproterozoic Chuar Group, Grand Canyon: A classification guided by modern testate amoebae. J Paleontol 2003, 77:409-429.
    • (2003) J Paleontol , vol.77 , pp. 409-429
    • Porter, S.M.1    Meisterfeld, R.2    Knoll, A.H.3
  • 46
    • 69449103218 scopus 로고    scopus 로고
    • Eumycetozoa = Amoebozoa?.: SSUrDNA phylogeny of protosteloid slime molds and its significance for the amoebozoan supergroup
    • Shadwick L.L., Spiegel F.W., Shadwick J.D.L., Brown M.W., Silberman J.D. Eumycetozoa = Amoebozoa?.: SSUrDNA phylogeny of protosteloid slime molds and its significance for the amoebozoan supergroup. PloS ONE 2009, 4(8):e6754.
    • (2009) PloS ONE , vol.4 , Issue.8
    • Shadwick, L.L.1    Spiegel, F.W.2    Shadwick, J.D.L.3    Brown, M.W.4    Silberman, J.D.5
  • 47
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst Biol 2002, 51:492-508.
    • (2002) Syst Biol , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 48
    • 21644440363 scopus 로고    scopus 로고
    • Approximately unbiased tests of regions using multistep-multiscale bootstrap resampling
    • Shimodaira H. Approximately unbiased tests of regions using multistep-multiscale bootstrap resampling. Ann Statist 2004, 32:2616-2641.
    • (2004) Ann Statist , vol.32 , pp. 2616-2641
    • Shimodaira, H.1
  • 49
    • 0036139287 scopus 로고    scopus 로고
    • CONSEL: for assessing the confidence of phylogenetic tree selection
    • Shimodaira H., Hasegawa M. CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics 2001, 17:1246-1247.
    • (2001) Bioinformatics , vol.17 , pp. 1246-1247
    • Shimodaira, H.1    Hasegawa, M.2
  • 50
    • 38749085291 scopus 로고    scopus 로고
    • Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page, 1987; with description of Acramoeba dendroodea n. g., n. sp., originally misidentified as 'Gephyramoeba sp.'
    • Smirnov A.V., Nassonova E.S., Cavalier-Smith T. Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page, 1987; with description of Acramoeba dendroodea n. g., n. sp., originally misidentified as 'Gephyramoeba sp.'. Eur J Protistol 2008, 44:35-44.
    • (2008) Eur J Protistol , vol.44 , pp. 35-44
    • Smirnov, A.V.1    Nassonova, E.S.2    Cavalier-Smith, T.3
  • 51
    • 80051579010 scopus 로고    scopus 로고
    • A revised classification of naked lobose amoebae (Amoebozoa: Lobosa)
    • Smirnov A.V., Chao E., Nassonova E.S., Cavalier-Smith T. A revised classification of naked lobose amoebae (Amoebozoa: Lobosa). Protist 2011, 162:545-570.
    • (2011) Protist , vol.162 , pp. 545-570
    • Smirnov, A.V.1    Chao, E.2    Nassonova, E.S.3    Cavalier-Smith, T.4
  • 52
    • 70649101310 scopus 로고    scopus 로고
    • Rhizamoeba neglecta n. sp (Amoebozoa, Tubulinea) from the bottom sediments of freshwater Lake Leshevoe (Valamo Island, North-Western Russia), with notes on the phylogeny of the order Leptomyxida
    • Smirnov A., Nassonova E., Fahrni J., Pawlowski J. Rhizamoeba neglecta n. sp (Amoebozoa, Tubulinea) from the bottom sediments of freshwater Lake Leshevoe (Valamo Island, North-Western Russia), with notes on the phylogeny of the order Leptomyxida. Eur J Protistol 2009, 45:251-259.
    • (2009) Eur J Protistol , vol.45 , pp. 251-259
    • Smirnov, A.1    Nassonova, E.2    Fahrni, J.3    Pawlowski, J.4
  • 54
    • 38649083418 scopus 로고    scopus 로고
    • Diversity and biogeography of testate amoebae
    • Smith H.G., Bobrov A., Lara E. Diversity and biogeography of testate amoebae. Biodivers Conserv 2008, 17:329-343.
    • (2008) Biodivers Conserv , vol.17 , pp. 329-343
    • Smith, H.G.1    Bobrov, A.2    Lara, E.3
  • 55
    • 0036739159 scopus 로고    scopus 로고
    • Insights into the diversity of choreotrich and oligotrich ciliates (Class: Spirotrichea) based on genealogical analyses of multiple loci
    • Snoeyenbos-West O.L.O., Salcedo T., McManus G.B., Katz L.A. Insights into the diversity of choreotrich and oligotrich ciliates (Class: Spirotrichea) based on genealogical analyses of multiple loci. Int J Syst Evol Microbiol 2002, 52:1901-1913.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1901-1913
    • Snoeyenbos-West, O.L.O.1    Salcedo, T.2    McManus, G.B.3    Katz, L.A.4
  • 56
    • 33750403801 scopus 로고    scopus 로고
    • RaxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A. RaxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 57
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RaxML web servers
    • Stamatakis A., Hoover P., Rougemont J. A rapid bootstrap algorithm for the RaxML web servers. Syst Biol 2008, 57:758-771.
    • (2008) Syst Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 58
    • 79960854261 scopus 로고    scopus 로고
    • Placement of diverse amoeboid lineages in the eukaryotic tree of life and the evolution of 'Amoebozoa'
    • Tekle Y.I., Grant J., Katz L.A. Placement of diverse amoeboid lineages in the eukaryotic tree of life and the evolution of 'Amoebozoa'. J Phycol 2007, 43:56.
    • (2007) J Phycol , vol.43 , pp. 56
    • Tekle, Y.I.1    Grant, J.2    Katz, L.A.3
  • 59
    • 41149122001 scopus 로고    scopus 로고
    • Phylogenetic placement of diverse amoebae inferred from multigene analyses and assessment of clade stability within 'Amoebozoa' upon removal of varying rate classes of SSU rDNA
    • Tekle Y.I., Grant J., Anderson O.R., Nerad T.A., Cole J.C., Patterson D.J., Katz L.A. Phylogenetic placement of diverse amoebae inferred from multigene analyses and assessment of clade stability within 'Amoebozoa' upon removal of varying rate classes of SSU rDNA. Mol Phylogenet Evol 2008, 47:339-352.
    • (2008) Mol Phylogenet Evol , vol.47 , pp. 339-352
    • Tekle, Y.I.1    Grant, J.2    Anderson, O.R.3    Nerad, T.A.4    Cole, J.C.5    Patterson, D.J.6    Katz, L.A.7
  • 60
    • 84858708562 scopus 로고    scopus 로고
    • Is Difflugia nebeloides (Amoebozoa: Arcellinida) really a Difflugia? Re-description and new combination
    • Todorov M., Golemansky V., Meisterfeld R. Is Difflugia nebeloides (Amoebozoa: Arcellinida) really a Difflugia? Re-description and new combination. Acta Zool Bulg 2010, 62:13-20.
    • (2010) Acta Zool Bulg , vol.62 , pp. 13-20
    • Todorov, M.1    Golemansky, V.2    Meisterfeld, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.