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Volumn 8, Issue 4, 2013, Pages

De novo Sequence Assembly and Characterization of Lycoris aurea Transcriptome Using GS FLX Titanium Platform of 454 Pyrosequencing

Author keywords

[No Author keywords available]

Indexed keywords

ALKALOID; COMPLEMENTARY DNA; CYTOCHROME P450; GENOMIC RNA; PHENYLALANINE AMMONIA LYASE; TITANIUM; TRANSCRIPTOME; TYROSINE DECARBOXYLASE;

EID: 84876057339     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0060449     Document Type: Article
Times cited : (46)

References (91)
  • 1
    • 0028250975 scopus 로고
    • Synopsis of the genus Lycoris (Amaryllidaceae)
    • Hsu PS, Kurita S, Yu ZZ, Lin JZ, (1994) Synopsis of the genus Lycoris (Amaryllidaceae). SIDA 16: 301-331.
    • (1994) SIDA , vol.16 , pp. 301-331
    • Hsu, P.S.1    Kurita, S.2    Yu, Z.Z.3    Lin, J.Z.4
  • 2
    • 37849024695 scopus 로고    scopus 로고
    • Phylogenetic relationships and possible hybrid origin of Lycoris species (Amaryllidaceae) revealed by its sequences
    • Shi S, Qiu Y, Li E, Wu L, Fu C, (2006) Phylogenetic relationships and possible hybrid origin of Lycoris species (Amaryllidaceae) revealed by its sequences. Biochem Genet 44: 198-208.
    • (2006) Biochem Genet , vol.44 , pp. 198-208
    • Shi, S.1    Qiu, Y.2    Li, E.3    Wu, L.4    Fu, C.5
  • 3
    • 34548410569 scopus 로고    scopus 로고
    • Karyotypes of six populations of Lycoris radiata and discovery of the tetraploid
    • Zhou SB, Yu BQ, Luo Q, Hu JR, Bi D, (2007) Karyotypes of six populations of Lycoris radiata and discovery of the tetraploid. Acta Phytotaxon Sin 45: 513-522.
    • (2007) Acta Phytotaxon Sin , vol.45 , pp. 513-522
    • Zhou, S.B.1    Yu, B.Q.2    Luo, Q.3    Hu, J.R.4    Bi, D.5
  • 4
    • 0346433486 scopus 로고    scopus 로고
    • Amaryllidaceae and Sceletium alkaloids
    • Jin Z, (2003) Amaryllidaceae and Sceletium alkaloids. Nat Prod Rep 20: 606-614.
    • (2003) Nat Prod Rep , vol.20 , pp. 606-614
    • Jin, Z.1
  • 5
    • 34547216418 scopus 로고    scopus 로고
    • Amaryllidaceae and Sceletium alkaloids
    • Jin Z, (2007) Amaryllidaceae and Sceletium alkaloids. Nat Prod Rep 24: 886-905.
    • (2007) Nat Prod Rep , vol.24 , pp. 886-905
    • Jin, Z.1
  • 6
    • 61449118878 scopus 로고    scopus 로고
    • Amaryllidaceae and Sceletium alkaloids
    • Jin Z, (2009) Amaryllidaceae and Sceletium alkaloids. Nat Prod Rep 26: 363-381.
    • (2009) Nat Prod Rep , vol.26 , pp. 363-381
    • Jin, Z.1
  • 7
    • 77954380130 scopus 로고    scopus 로고
    • Ethanol extract of Lycoris radiata induces cell death in B16F10 melanoma via p38-mediated AP-1 activation
    • Son M, Kim A, Lee J, Park CH, Heo JC, et al. (2010) Ethanol extract of Lycoris radiata induces cell death in B16F10 melanoma via p38-mediated AP-1 activation. Oncol Rep 24: 473-478.
    • (2010) Oncol Rep , vol.24 , pp. 473-478
    • Son, M.1    Kim, A.2    Lee, J.3    Park, C.H.4    Heo, J.C.5
  • 8
    • 10044221979 scopus 로고    scopus 로고
    • Effects of lycorine on HL-60 cells via arresting cell cycle and inducing apoptosis
    • Liu J, Hu WX, He LF, Ye M, Li Y, (2004) Effects of lycorine on HL-60 cells via arresting cell cycle and inducing apoptosis. FEBS Lett 578: 245-250.
    • (2004) FEBS Lett , vol.578 , pp. 245-250
    • Liu, J.1    Hu, W.X.2    He, L.F.3    Ye, M.4    Li, Y.5
  • 9
    • 33947713387 scopus 로고    scopus 로고
    • Apoptosis induced by lycorine in KM3 cells is associated with the G0/G1 cell cycle arrest
    • Li Y, Liu J, Tang LJ, Shi YW, Ren W, et al. (2007) Apoptosis induced by lycorine in KM3 cells is associated with the G0/G1 cell cycle arrest. Oncol Rep 17: 377-384.
    • (2007) Oncol Rep , vol.17 , pp. 377-384
    • Li, Y.1    Liu, J.2    Tang, L.J.3    Shi, Y.W.4    Ren, W.5
  • 10
    • 57749088585 scopus 로고    scopus 로고
    • Lycorine induces apoptosis and down-regulation of Mcl-1 in human leukemia cells
    • Liu XS, Jiang J, Jiao XY, Wu YE, Lin JH, et al. (2009) Lycorine induces apoptosis and down-regulation of Mcl-1 in human leukemia cells. Cancer Lett 274: 16-24.
    • (2009) Cancer Lett , vol.274 , pp. 16-24
    • Liu, X.S.1    Jiang, J.2    Jiao, X.Y.3    Wu, Y.E.4    Lin, J.H.5
  • 11
    • 20444382413 scopus 로고    scopus 로고
    • Identification of natural compounds with antiviral activities against SARS-associated coronavirus
    • Li SY, Chen C, Zhang HQ, Guo HY, Wang H, et al. (2005) Identification of natural compounds with antiviral activities against SARS-associated coronavirus. Antiviral Res 67: 18-23.
    • (2005) Antiviral Res , vol.67 , pp. 18-23
    • Li, S.Y.1    Chen, C.2    Zhang, H.Q.3    Guo, H.Y.4    Wang, H.5
  • 12
    • 0038701898 scopus 로고    scopus 로고
    • Physicochemical methods for the analysis of galanthamine (review)
    • Novikova IY, Tulaganov AA, (2002) Physicochemical methods for the analysis of galanthamine (review). Pharm Chem J 36: 623-627.
    • (2002) Pharm Chem J , vol.36 , pp. 623-627
    • Novikova, I.Y.1    Tulaganov, A.A.2
  • 13
    • 0028819939 scopus 로고
    • The pharmacology of galanthamine and its analogues
    • Harvey AL, (1995) The pharmacology of galanthamine and its analogues. Pharmacol Ther 68: 113-128.
    • (1995) Pharmacol Ther , vol.68 , pp. 113-128
    • Harvey, A.L.1
  • 14
    • 12644273785 scopus 로고    scopus 로고
    • Pharmacological evaluation of novel Alzheimer's disease therapeutics: acetylcholinesterase inhibitors related to galanthamine
    • Bores GM, Huger FP, Petko W, Mutlib AE, Camacho F, et al. (1996) Pharmacological evaluation of novel Alzheimer's disease therapeutics: acetylcholinesterase inhibitors related to galanthamine. J Pharmacol Exp Ther 277: 728-738.
    • (1996) J Pharmacol Exp Ther , vol.277 , pp. 728-738
    • Bores, G.M.1    Huger, F.P.2    Petko, W.3    Mutlib, A.E.4    Camacho, F.5
  • 15
    • 0043204252 scopus 로고    scopus 로고
    • Plants used in Chinese and Indian traditional medicine for improvement of memory and cognitive function
    • Howes MJ, Houghton P, (2003) Plants used in Chinese and Indian traditional medicine for improvement of memory and cognitive function. Pharmacol Biochem Behav 75: 513-527.
    • (2003) Pharmacol Biochem Behav , vol.75 , pp. 513-527
    • Howes, M.J.1    Houghton, P.2
  • 17
    • 37049065522 scopus 로고
    • Phenol oxidation and biosynthesis. Part V. The synthesis of galanthamine
    • Barton DHR, Kirby GW (1962) Phenol oxidation and biosynthesis. Part V. The synthesis of galanthamine. J Chem Soc 806-817.
    • (1962) J Chem Soc , pp. 806-817
    • Barton, D.H.R.1    Kirby, G.W.2
  • 21
    • 0019994480 scopus 로고
    • General methods for alkaloid synthesis. Total synthesis of racemic lycoramine
    • Martin SF, Garrison PJ, (1982) General methods for alkaloid synthesis. Total synthesis of racemic lycoramine. J Org Chem 47: 1513-1518.
    • (1982) J Org Chem , vol.47 , pp. 1513-1518
    • Martin, S.F.1    Garrison, P.J.2
  • 23
    • 0026542625 scopus 로고
    • A short stereospecific synthesis of (dl)-lycoramine. Control of relative stereochemistry by dipole effects
    • Parker KA, Kim HJ, (1992) A short stereospecific synthesis of (dl)-lycoramine. Control of relative stereochemistry by dipole effects. J Org Chem 57: 752-755.
    • (1992) J Org Chem , vol.57 , pp. 752-755
    • Parker, K.A.1    Kim, H.J.2
  • 24
    • 0000247985 scopus 로고    scopus 로고
    • Oxidative intramolecular phenolic coupling reaction induced by a hypervalent iodine (III) reagent: leading to galanthamine-type Amaryllidaceae alkaloids
    • Kita Y, Arisawa M, Gyoten M, Nakajima M, Hamada R, et al. (1998) Oxidative intramolecular phenolic coupling reaction induced by a hypervalent iodine (III) reagent: leading to galanthamine-type Amaryllidaceae alkaloids. J Org Chem 63: 6625-6633.
    • (1998) J Org Chem , vol.63 , pp. 6625-6633
    • Kita, Y.1    Arisawa, M.2    Gyoten, M.3    Nakajima, M.4    Hamada, R.5
  • 25
    • 11444249264 scopus 로고    scopus 로고
    • An efficient total synthesis of (±)-lycoramine
    • Fan CA, Tu YQ, Song ZL, Zhang E, Shi L, et al. (2004) An efficient total synthesis of (±)-lycoramine. Org Lett 6: 4691-4694.
    • (2004) Org Lett , vol.6 , pp. 4691-4694
    • Fan, C.A.1    Tu, Y.Q.2    Song, Z.L.3    Zhang, E.4    Shi, L.5
  • 26
    • 79751531335 scopus 로고    scopus 로고
    • Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
    • Blanca J, Cañizares J, Roig C, Ziarsolo P, Nuez F, et al. (2011) Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae). BMC Genomics 12: 104.
    • (2011) BMC Genomics , vol.12 , pp. 104
    • Blanca, J.1    Cañizares, J.2    Roig, C.3    Ziarsolo, P.4    Nuez, F.5
  • 27
    • 10344221610 scopus 로고    scopus 로고
    • Generation and analysis of expressed sequence tags from the tender shoots cDNA library of tea plant (Camellia sinensis)
    • Chen L, Zhao L, Gao Q, (2005) Generation and analysis of expressed sequence tags from the tender shoots cDNA library of tea plant (Camellia sinensis). Plant Sci 168: 359-363.
    • (2005) Plant Sci , vol.168 , pp. 359-363
    • Chen, L.1    Zhao, L.2    Gao, Q.3
  • 28
    • 63649104735 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags in apomictic guineagrass (Panicum maximum)
    • Yamada-Akiyama H, Akiyama Y, Ebina M, Xu Q, Tsuruta S, et al. (2009) Analysis of expressed sequence tags in apomictic guineagrass (Panicum maximum). J Plant Physiol 166: 750-761.
    • (2009) J Plant Physiol , vol.166 , pp. 750-761
    • Yamada-Akiyama, H.1    Akiyama, Y.2    Ebina, M.3    Xu, Q.4    Tsuruta, S.5
  • 29
    • 33847051947 scopus 로고    scopus 로고
    • The molecular ecologist's guide to expressed sequence tags
    • Bouck A, Vision T, (2007) The molecular ecologist's guide to expressed sequence tags. Mol Ecol 16: 907-924.
    • (2007) Mol Ecol , vol.16 , pp. 907-924
    • Bouck, A.1    Vision, T.2
  • 30
    • 77949483522 scopus 로고    scopus 로고
    • The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.)
    • Raju NL, Gnanesh BN, Lekha P, Jayashree B, Pande S, et al. (2010) The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.). BMC Plant Biol 10: 45.
    • (2010) BMC Plant Biol , vol.10 , pp. 45
    • Raju, N.L.1    Gnanesh, B.N.2    Lekha, P.3    Jayashree, B.4    Pande, S.5
  • 31
    • 0037854629 scopus 로고    scopus 로고
    • Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
    • Thiel T, Michalek W, Varshney RK, Graner A, (2003) Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor Appl Genet 106: 411-422.
    • (2003) Theor Appl Genet , vol.106 , pp. 411-422
    • Thiel, T.1    Michalek, W.2    Varshney, R.K.3    Graner, A.4
  • 32
    • 33751310598 scopus 로고    scopus 로고
    • Development of EST-SSRs in Cucumis sativus from sequence database
    • Kong Q, Xiang C, Yu Z, (2006) Development of EST-SSRs in Cucumis sativus from sequence database. Mol Ecol Notes 6: 1234-1236.
    • (2006) Mol Ecol Notes , vol.6 , pp. 1234-1236
    • Kong, Q.1    Xiang, C.2    Yu, Z.3
  • 33
    • 84864290708 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags from grapevine flower and fruit and development of simple sequence repeat markers
    • Wang XC, Guo L, Shangguan LF, Wang C, Yang G, et al. (2012) Analysis of expressed sequence tags from grapevine flower and fruit and development of simple sequence repeat markers. Mol Bio Rep 39: 6825-6834.
    • (2012) Mol Bio Rep , vol.39 , pp. 6825-6834
    • Wang, X.C.1    Guo, L.2    Shangguan, L.F.3    Wang, C.4    Yang, G.5
  • 34
    • 79951828683 scopus 로고    scopus 로고
    • De novo assembly of chickpea transcriptome using short reads for gene discovery and marker identification
    • Garg R, Patel RK, Tyagi AK, Jain M, (2011) De novo assembly of chickpea transcriptome using short reads for gene discovery and marker identification. DNA Res 18: 53-63.
    • (2011) DNA Res , vol.18 , pp. 53-63
    • Garg, R.1    Patel, R.K.2    Tyagi, A.K.3    Jain, M.4
  • 37
    • 60549112895 scopus 로고    scopus 로고
    • Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don
    • Li X, Wu HX, Dillon SK, Southerton SG, (2009) Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don. BMC Genomics 10: 41.
    • (2009) BMC Genomics , vol.10 , pp. 41
    • Li, X.1    Wu, H.X.2    Dillon, S.K.3    Southerton, S.G.4
  • 38
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies-the next generation
    • Metzker ML, (2010) Sequencing technologies-the next generation. Nat Rev Genet 11: 31-46.
    • (2010) Nat Rev Genet , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 39
    • 84857529522 scopus 로고    scopus 로고
    • Evaluating characteristics of de novo assembly software on 454 transcriptome data: A simulation approach
    • Mundry M, Bornberg-Bauer E, Sammeth M, Feulner PGD, (2012) Evaluating characteristics of de novo assembly software on 454 transcriptome data: A simulation approach. PLoS One 7: e31410.
    • (2012) PLoS One , vol.7
    • Mundry, M.1    Bornberg-Bauer, E.2    Sammeth, M.3    Feulner, P.G.D.4
  • 42
    • 77951894310 scopus 로고    scopus 로고
    • Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery
    • Parchman TL, Geist KS, Grahnen JA, Benkman CW, Buerkle CA, (2010) Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery. BMC Genomics 11: 180.
    • (2010) BMC Genomics , vol.11 , pp. 180
    • Parchman, T.L.1    Geist, K.S.2    Grahnen, J.A.3    Benkman, C.W.4    Buerkle, C.A.5
  • 43
    • 34250666153 scopus 로고    scopus 로고
    • Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing
    • Weber APM, Weber KL, Carr K, Wilkerson C, Ohlrogge JB, (2007) Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing. Plant Physiol 144: 32-42.
    • (2007) Plant Physiol , vol.144 , pp. 32-42
    • Weber, A.P.M.1    Weber, K.L.2    Carr, K.3    Wilkerson, C.4    Ohlrogge, J.B.5
  • 44
    • 70449516453 scopus 로고    scopus 로고
    • Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing
    • Wang W, Wang Y, Zhang Q, Qi Y, Guo D, (2009) Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing. BMC Genomics 10: 465.
    • (2009) BMC Genomics , vol.10 , pp. 465
    • Wang, W.1    Wang, Y.2    Zhang, Q.3    Qi, Y.4    Guo, D.5
  • 45
    • 77953600890 scopus 로고    scopus 로고
    • Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types
    • Guo S, Zheng Y, Joung JG, Liu S, Zhang Z, et al. (2010) Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. BMC Genomics 11: 384.
    • (2010) BMC Genomics , vol.11 , pp. 384
    • Guo, S.1    Zheng, Y.2    Joung, J.G.3    Liu, S.4    Zhang, Z.5
  • 46
    • 33751017957 scopus 로고    scopus 로고
    • Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
    • Cheung F, Haas BJ, Goldberg SMD, May GD, Xiao Y, et al. (2006) Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology. BMC Genomics 7: 272.
    • (2006) BMC Genomics , vol.7 , pp. 272
    • Cheung, F.1    Haas, B.J.2    Goldberg, S.M.D.3    May, G.D.4    Xiao, Y.5
  • 49
    • 79955076335 scopus 로고    scopus 로고
    • De novo assembly and transcriptome analysis of five major tissues of Jatropha curcas L. using GS FLX titanium platform of 454 pyrosequencing
    • Natarajan P, Parani M, (2011) De novo assembly and transcriptome analysis of five major tissues of Jatropha curcas L. using GS FLX titanium platform of 454 pyrosequencing. BMC Genomics 12: 191.
    • (2011) BMC Genomics , vol.12 , pp. 191
    • Natarajan, P.1    Parani, M.2
  • 50
    • 84865052748 scopus 로고    scopus 로고
    • De Novo sequencing and characterization of the floral transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)
    • Zhang XM, Zhao L, Larson-Rabin Z, Li DZ, Guo ZH, (2012) De Novo sequencing and characterization of the floral transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae). PLoS One 7: e42082.
    • (2012) PLoS One , vol.7
    • Zhang, X.M.1    Zhao, L.2    Larson-Rabin, Z.3    Li, D.Z.4    Guo, Z.H.5
  • 51
    • 41149167170 scopus 로고    scopus 로고
    • Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
    • Vera JC, Wheat CW, Fescemyer HW, Frilander MJ, Crawford DL, et al. (2008) Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol Ecol 17: 1636-1647.
    • (2008) Mol Ecol , vol.17 , pp. 1636-1647
    • Vera, J.C.1    Wheat, C.W.2    Fescemyer, H.W.3    Frilander, M.J.4    Crawford, D.L.5
  • 52
    • 79952045110 scopus 로고    scopus 로고
    • Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds
    • Shi CY, Yang H, Wei CL, Yu O, Zhang ZZ, et al. (2011) Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds. BMC Genomics 12: 131.
    • (2011) BMC Genomics , vol.12 , pp. 131
    • Shi, C.Y.1    Yang, H.2    Wei, C.L.3    Yu, O.4    Zhang, Z.Z.5
  • 53
    • 58149284036 scopus 로고    scopus 로고
    • Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches
    • Cheung F, Win J, Lang JM, Hamilton J, Vuong H, et al. (2008) Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. BMC Genomics 9: 542.
    • (2008) BMC Genomics , vol.9 , pp. 542
    • Cheung, F.1    Win, J.2    Lang, J.M.3    Hamilton, J.4    Vuong, H.5
  • 54
    • 38049110854 scopus 로고    scopus 로고
    • Growth and photosynthetic responses of three Lycoris species to levels of irradiance
    • Meng P, Ge Y, Cao Q, Chang J, Pan P, et al. (2008) Growth and photosynthetic responses of three Lycoris species to levels of irradiance. HortScience 43: 134-137.
    • (2008) HortScience , vol.43 , pp. 134-137
    • Meng, P.1    Ge, Y.2    Cao, Q.3    Chang, J.4    Pan, P.5
  • 56
    • 84860253172 scopus 로고    scopus 로고
    • Extracts of Lycoris aurea induce apoptosis in murine sarcoma S180 cells
    • Liao N, Ao M, Zhang P, Yu L, (2012) Extracts of Lycoris aurea induce apoptosis in murine sarcoma S180 cells. Molecules 17: 3723-3735.
    • (2012) Molecules , vol.17 , pp. 3723-3735
    • Liao, N.1    Ao, M.2    Zhang, P.3    Yu, L.4
  • 57
    • 85037162069 scopus 로고    scopus 로고
    • Photosynthetic characteristics of Lycoris aurea and monthly dynamics of alkaloid contents in its bulbs
    • Quan M, Ou L, She C, Wu X, Chen D, et al. (2012) Photosynthetic characteristics of Lycoris aurea and monthly dynamics of alkaloid contents in its bulbs. Afr J Biotechnol 11: 3686-3691.
    • (2012) Afr J Biotechnol , vol.11 , pp. 3686-3691
    • Quan, M.1    Ou, L.2    She, C.3    Wu, X.4    Chen, D.5
  • 58
    • 34548435735 scopus 로고
    • A new chromosome number and karyotype in L. radiata
    • Bose S, (1963) A new chromosome number and karyotype in L. radiata. Nature 197: 1229-1230.
    • (1963) Nature , vol.197 , pp. 1229-1230
    • Bose, S.1
  • 59
    • 85007731488 scopus 로고
    • Variation and evolution in the karyotype of Lycoris, Amaryllidaceae. IV. Intraspecific variation in the karyotype of L. radiata (L'Herit.) Herb. and the origin of this triploid species
    • Kurita S, (1987) Variation and evolution in the karyotype of Lycoris, Amaryllidaceae. IV. Intraspecific variation in the karyotype of L. radiata (L'Herit.) Herb. and the origin of this triploid species. Cytologia 52: 137-149.
    • (1987) Cytologia , vol.52 , pp. 137-149
    • Kurita, S.1
  • 60
    • 79961144803 scopus 로고    scopus 로고
    • Natural variation in petal color in Lycoris longituba revealed by anthocyanin components
    • He Q, Shen Y, Wang M, Huang M, Yang R, et al. (2011) Natural variation in petal color in Lycoris longituba revealed by anthocyanin components. PLoS One 6: e22098.
    • (2011) PLoS One , vol.6
    • He, Q.1    Shen, Y.2    Wang, M.3    Huang, M.4    Yang, R.5
  • 61
    • 84861805303 scopus 로고    scopus 로고
    • Polymorphic microsatellite loci for the genetic analysis of Lycoris radiata (Amaryllidaceae) and cross-amplification in other congeneric species
    • Xuan SQ, Zheng JY, Wang H, Gao P, Zhou SB, et al. (2011) Polymorphic microsatellite loci for the genetic analysis of Lycoris radiata (Amaryllidaceae) and cross-amplification in other congeneric species. Genet Mol Res 10: 3141-3145.
    • (2011) Genet Mol Res , vol.10 , pp. 3141-3145
    • Xuan, S.Q.1    Zheng, J.Y.2    Wang, H.3    Gao, P.4    Zhou, S.B.5
  • 62
    • 25844518947 scopus 로고    scopus 로고
    • Genome differentiation in Lycoris species (Amaryllidaceae) identified by genomic in situ hybridization
    • Ogawa T, Tarumoto I, Ma B, Ueno M, Kurita S, (2005) Genome differentiation in Lycoris species (Amaryllidaceae) identified by genomic in situ hybridization. Breed Sci 55: 265-269.
    • (2005) Breed Sci , vol.55 , pp. 265-269
    • Ogawa, T.1    Tarumoto, I.2    Ma, B.3    Ueno, M.4    Kurita, S.5
  • 63
    • 33749678613 scopus 로고    scopus 로고
    • Genetic variations in the chloroplast genome and phylogenetic clustering of Lycoris species
    • Hori T, Hanashi A, Sasanuma T, Kurita S, (2006) Genetic variations in the chloroplast genome and phylogenetic clustering of Lycoris species. Genes Genet Syst 81: 243-253.
    • (2006) Genes Genet Syst , vol.81 , pp. 243-253
    • Hori, T.1    Hanashi, A.2    Sasanuma, T.3    Kurita, S.4
  • 64
    • 77955315687 scopus 로고    scopus 로고
    • Analysis of floral transcription factors from Lycoris longituba
    • He QL, Cui SJ, Gu JL, Zhang H, Wang MX, et al. (2010) Analysis of floral transcription factors from Lycoris longituba. Genomics 96: 119-127.
    • (2010) Genomics , vol.96 , pp. 119-127
    • He, Q.L.1    Cui, S.J.2    Gu, J.L.3    Zhang, H.4    Wang, M.X.5
  • 65
    • 11944266270 scopus 로고    scopus 로고
    • Improved production of galanthamine and related alkaloids by methyl jasmonate in Narcissus confusus shoot-clumps
    • Colque R, Viladomat F, Bastida J, Codina C, (2004) Improved production of galanthamine and related alkaloids by methyl jasmonate in Narcissus confusus shoot-clumps. Planta Med 70: 1180-1188.
    • (2004) Planta Med , vol.70 , pp. 1180-1188
    • Colque, R.1    Viladomat, F.2    Bastida, J.3    Codina, C.4
  • 66
    • 77953536792 scopus 로고    scopus 로고
    • Effects of ethylene on somatic embryogenesis and galanthamine content in Leucojum aestivum L. cultures
    • Ptak A, El Tahchy A, Wyżgolik G, Henry M. Laurain-Mattar D, (2010) Effects of ethylene on somatic embryogenesis and galanthamine content in Leucojum aestivum L. cultures. Plant Cell Tiss Organ Cult 102: 61-67.
    • (2010) Plant Cell Tiss Organ Cult , vol.102 , pp. 61-67
    • Ptak, A.1    El Tahchy, A.2    Wyzgolik, G.3    Henry, M.4    Laurain-Mattar, D.5
  • 67
    • 70350616071 scopus 로고    scopus 로고
    • Effect of abiotic and biotic elicitors on growth and alkaloid accumulation of Lycoris chinensis seedlings
    • Mu H, Wang R, Li X, Jiang Y, Wang C, et al. (2009) Effect of abiotic and biotic elicitors on growth and alkaloid accumulation of Lycoris chinensis seedlings. Z Naturforsch C 64: 541-550.
    • (2009) Z Naturforsch C , vol.64 , pp. 541-550
    • Mu, H.1    Wang, R.2    Li, X.3    Jiang, Y.4    Wang, C.5
  • 68
    • 79951577838 scopus 로고    scopus 로고
    • Molecular cloning and characterization of a phenylalanine ammonia-lyase gene (LrPAL) from Lycoris radiata
    • Jiang Y, Xia N, Li X, Shen W, Liang L, et al. (2011) Molecular cloning and characterization of a phenylalanine ammonia-lyase gene (LrPAL) from Lycoris radiata. Mol Biol Rep 38: 1935-1940.
    • (2011) Mol Biol Rep , vol.38 , pp. 1935-1940
    • Jiang, Y.1    Xia, N.2    Li, X.3    Shen, W.4    Liang, L.5
  • 69
    • 77958495542 scopus 로고    scopus 로고
    • Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds
    • Natarajan P, Kanagasabapathy D, Gunadayalan G, Panchalingam J, Shree N, et al. (2010) Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds. BMC Genomics 11: 606.
    • (2010) BMC Genomics , vol.11 , pp. 606
    • Natarajan, P.1    Kanagasabapathy, D.2    Gunadayalan, G.3    Panchalingam, J.4    Shree, N.5
  • 70
    • 24044455869 scopus 로고    scopus 로고
    • Genome sequencing in microfabricated high-density picolitre reactors
    • Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380.
    • (2005) Nature , vol.437 , pp. 376-380
    • Margulies, M.1    Egholm, M.2    Altman, W.E.3    Attiya, S.4    Bader, J.S.5
  • 71
    • 77957926979 scopus 로고    scopus 로고
    • Comparing de novo assemblers for 454 transcriptome data
    • Kumar S, Blaxter ML, (2010) Comparing de novo assemblers for 454 transcriptome data. BMC Genomics 11: 571.
    • (2010) BMC Genomics , vol.11 , pp. 571
    • Kumar, S.1    Blaxter, M.L.2
  • 72
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5
  • 73
    • 43949138227 scopus 로고    scopus 로고
    • Blast2GO: A comprehensive suite for functional analysis in plant genomics
    • Conesa A, Götz S, (2008) Blast2GO: A comprehensive suite for functional analysis in plant genomics. Int J Plant Genomics 2008: 619832.
    • (2008) Int J Plant Genomics , vol.2008 , pp. 619832
    • Conesa, A.1    Götz, S.2
  • 74
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: kyoto encyclopedia of genes and genomes
    • Kanehisa M, Goto S, (2000) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 28: 27-30.
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 75
    • 47249124531 scopus 로고    scopus 로고
    • Chemistry, biology, and medicinal potential of narciclasine and its congeners
    • Kornienko A, Evidente A, (2008) Chemistry, biology, and medicinal potential of narciclasine and its congeners. Chem Rev 108: 1982-2014.
    • (2008) Chem Rev , vol.108 , pp. 1982-2014
    • Kornienko, A.1    Evidente, A.2
  • 76
    • 0031694246 scopus 로고    scopus 로고
    • Biosynthesis of the Amaryllidaceae alkaloid galanthamine
    • Eichhorn J, Takada T, Kita Y Zenk MH, (1998) Biosynthesis of the Amaryllidaceae alkaloid galanthamine. Phytochemistry 49: 1037-1047.
    • (1998) Phytochemistry , vol.49 , pp. 1037-1047
    • Eichhorn, J.1    Takada, T.2    Kita, Y.3    Zenk, M.H.4
  • 77
    • 0007633660 scopus 로고
    • Phenol oxidation and biosynthesis. Part VI. The biogenesis of Amaryllidaceae alkaloids
    • Barton DHR, Kirby GW, Taylor JB, Thomas GM (1963) Phenol oxidation and biosynthesis. Part VI. The biogenesis of Amaryllidaceae alkaloids. J Chem Soc 4545-4558.
    • (1963) J Chem Soc , pp. 4545-4558
    • Barton, D.H.R.1    Kirby, G.W.2    Taylor, J.B.3    Thomas, G.M.4
  • 78
    • 0035134068 scopus 로고    scopus 로고
    • The biosynthesis of plant alkaloids and nitrogenous microbial metabolites
    • Herbert RB, (2001) The biosynthesis of plant alkaloids and nitrogenous microbial metabolites. Nat Prod Rep 18: 50-65.
    • (2001) Nat Prod Rep , vol.18 , pp. 50-65
    • Herbert, R.B.1
  • 79
    • 33749405298 scopus 로고
    • Biogenesis of the Amaryllidaceae alkaloids. II. Studies with whole plants, floral primordia and cell free extracts
    • Suhadolnik RJ, Fischer AG, Zulalian J, (1963) Biogenesis of the Amaryllidaceae alkaloids. II. Studies with whole plants, floral primordia and cell free extracts. Biochem Biophys Res Commun 11: 208-212.
    • (1963) Biochem Biophys Res Commun , vol.11 , pp. 208-212
    • Suhadolnik, R.J.1    Fischer, A.G.2    Zulalian, J.3
  • 80
    • 0015459853 scopus 로고
    • Studies of enzyme-mediated reactions. Part I. Syntheses of deuterium- or tritium-labelled (3S)-and (3R)-phenylalanines: stereochemical course of the elimination catalysed by L-phenylalanine ammonia-lyase
    • Wightman RH, Staunton J, Battersby AR, Hanson KR, (1972) Studies of enzyme-mediated reactions. Part I. Syntheses of deuterium- or tritium-labelled (3S)-and (3R)-phenylalanines: stereochemical course of the elimination catalysed by L-phenylalanine ammonia-lyase. J Chem Soc Perkin Trans 1 18: 2355-2364.
    • (1972) J Chem Soc Perkin Trans 1 , vol.18 , pp. 2355-2364
    • Wightman, R.H.1    Staunton, J.2    Battersby, A.R.3    Hanson, K.R.4
  • 81
    • 0031766440 scopus 로고    scopus 로고
    • Molecular-genetic analysis of plant cytochrome P450-dependent monooxygenases
    • Chapple C, (1998) Molecular-genetic analysis of plant cytochrome P450-dependent monooxygenases. Annu Rev Plant Physiol Plant Mol Biol 49: 311-343.
    • (1998) Annu Rev Plant Physiol Plant Mol Biol , vol.49 , pp. 311-343
    • Chapple, C.1
  • 82
  • 84
    • 77952516353 scopus 로고    scopus 로고
    • Diversification of P450 genes during land plant evolution
    • Mizutani M, Ohta D, (2010) Diversification of P450 genes during land plant evolution. Annu Rev Plant Biol 61: 291-315.
    • (2010) Annu Rev Plant Biol , vol.61 , pp. 291-315
    • Mizutani, M.1    Ohta, D.2
  • 85
    • 0141755310 scopus 로고    scopus 로고
    • Molecular cloning and characterization of CYP719, a methylenedioxy bridge-forming enzyme that belongs to a novel P450 family, from cultured Coptis japonica cells
    • Ikezawa N, Tanaka M, Nagayoshi M, Shinkyo R, Sakaki T, et al. (2003) Molecular cloning and characterization of CYP719, a methylenedioxy bridge-forming enzyme that belongs to a novel P450 family, from cultured Coptis japonica cells. J Biol Chem 278: 38557-38565.
    • (2003) J Biol Chem , vol.278 , pp. 38557-38565
    • Ikezawa, N.1    Tanaka, M.2    Nagayoshi, M.3    Shinkyo, R.4    Sakaki, T.5
  • 86
    • 42249110738 scopus 로고    scopus 로고
    • Molecular cloning and characterization of CYP80G2, a cytochrome P450 that catalyzes an intramolecular C-C phenol coupling of (S)-reticuline in magnoflorine biosynthesis, from cultured Coptis japonica cells
    • Ikezawa N, Iwasa K, Sato F, (2008) Molecular cloning and characterization of CYP80G2, a cytochrome P450 that catalyzes an intramolecular C-C phenol coupling of (S)-reticuline in magnoflorine biosynthesis, from cultured Coptis japonica cells. J Biol Chem 283: 8810-8821.
    • (2008) J Biol Chem , vol.283 , pp. 8810-8821
    • Ikezawa, N.1    Iwasa, K.2    Sato, F.3
  • 87
    • 0028928192 scopus 로고
    • Molecular cloning and heterologous expression of a cDNA encoding berbamunine synthase, a C-O phenol-coupling cytochrome P450 from the higher plant Berberis stolonifera
    • Kraus PF, Kutchan TM, (1995) Molecular cloning and heterologous expression of a cDNA encoding berbamunine synthase, a C-O phenol-coupling cytochrome P450 from the higher plant Berberis stolonifera. Proc Natl Acad Sci USA 92: 2071-2075.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 2071-2075
    • Kraus, P.F.1    Kutchan, T.M.2
  • 88
    • 69949174213 scopus 로고    scopus 로고
    • CYP719B1 is salutaridine synthase, the C-C phenol-coupling enzyme of morphine biosynthesis in opium poppy
    • Gesell A, Rolf M, Ziegler J, Díaz Chávez ML, Huang FC, et al. (2009) CYP719B1 is salutaridine synthase, the C-C phenol-coupling enzyme of morphine biosynthesis in opium poppy. J Biol Chem 284: 24432-24442.
    • (2009) J Biol Chem , vol.284 , pp. 24432-24442
    • Gesell, A.1    Rolf, M.2    Ziegler, J.3    Díaz Chávez, M.L.4    Huang, F.C.5
  • 89
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5


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