-
1
-
-
33747496376
-
A genome-wide survey of R gene polymorphisms in Arabidopsis
-
Bakker, E., Toomajian, C., Kreitman, M., and Bergelson, J. (2006). A genome-wide survey of R gene polymorphisms in Arabidopsis. Plant Cell 18, 1803-1818.
-
(2006)
Plant Cell
, vol.18
, pp. 1803-1818
-
-
Bakker, E.1
Toomajian, C.2
Kreitman, M.3
Bergelson, J.4
-
2
-
-
79956309501
-
The Selaginella Genome identifies genetic changes associated with the evolution of vascular plants
-
Banks, J. A., Nishiyama, T., Hasebe, M., Bowman, J. L., Gribskov, M., dePamphilis, C., et al. (2011). The Selaginella Genome identifies genetic changes associated with the evolution of vascular plants. Science 332, 960-963.
-
(2011)
Science
, vol.332
, pp. 960-963
-
-
Banks, J.A.1
Nishiyama, T.2
Hasebe, M.3
Bowman, J.L.4
Gribskov, M.5
dePamphilis, C.6
-
3
-
-
80053384429
-
Whole-genome sequencing of multiple Arabidopsis thaliana populations
-
Cao, J., Schneeberger, K., Ossowski, S., Gunther, T., Bender, S., Fitz, J., et al. (2011). Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat. Genet. 43, 956-963.
-
(2011)
Nat. Genet.
, vol.43
, pp. 956-963
-
-
Cao, J.1
Schneeberger, K.2
Ossowski, S.3
Gunther, T.4
Bender, S.5
Fitz, J.6
-
4
-
-
0036009922
-
Convergence and divergence of stress-induced mitogen-activated protein kinase signaling pathways at the level of two distinct mitogen-activated protein kinase kinases
-
Cardinale, F., Meskiene, I., Ouaked, F., and Hirt, H. (2002). Convergence and divergence of stress-induced mitogen-activated protein kinase signaling pathways at the level of two distinct mitogen-activated protein kinase kinases. Plant Cell 14, 703-711.
-
(2002)
Plant Cell
, vol.14
, pp. 703-711
-
-
Cardinale, F.1
Meskiene, I.2
Ouaked, F.3
Hirt, H.4
-
5
-
-
0035282334
-
Mammalian MAP kinase signalling cascades
-
Chang, L., and Karin, M. (2001). Mammalian MAP kinase signalling cascades. Nature 410, 37-40.
-
(2001)
Nature
, vol.410
, pp. 37-40
-
-
Chang, L.1
Karin, M.2
-
6
-
-
0035413618
-
MAP Kinases
-
Chen, Z., Gibson, T. B., Robinson, F., Silvestro, L., Pearson, G., Xu, B., et al. (2001). MAP Kinases. Chem. Rev. 101, 2449-2476.
-
(2001)
Chem. Rev.
, vol.101
, pp. 2449-2476
-
-
Chen, Z.1
Gibson, T.B.2
Robinson, F.3
Silvestro, L.4
Pearson, G.5
Xu, B.6
-
7
-
-
79954529507
-
ProtTest 3: Fast selection of best-fit models of protein evolution
-
Darriba, D., Taboada, G. L., Doallo, R., and Posada, D. (2011). ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27, 1164-1165.
-
(2011)
Bioinformatics
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
8
-
-
84865605488
-
Exploring the evolutionary path of plant MAPK networks
-
Dóczi, R., Ökrèsz, L., Romero, A., Paccanaro, A., and Bögre, L. (2012). Exploring the evolutionary path of plant MAPK networks. Trends Plant Sci. 17, 518-525.
-
(2012)
Trends Plant Sci.
, vol.17
, pp. 518-525
-
-
Dóczi, R.1
Ökrèsz, L.2
Romero, A.3
Paccanaro, A.4
Bögre, L.5
-
9
-
-
80055082271
-
Accelerated Profile HMM Searches
-
doi:10.1371/journal.pcbi.1002195
-
Eddy, S. R. (2011). Accelerated Profile HMM Searches. PLoS Comput. Biol. 7:e1002195. doi:10.1371/journal.pcbi.1002195
-
(2011)
PLoS Comput. Biol.
, vol.7
-
-
Eddy, S.R.1
-
10
-
-
0037143725
-
The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis
-
Gagne, J. M., Downes, B. P., Shiu, S.-H., Durski, A. M., and Vierstra, R. D. (2002). The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 99, 11519-11524.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 11519-11524
-
-
Gagne, J.M.1
Downes, B.P.2
Shiu, S.-H.3
Durski, A.M.4
Vierstra, R.D.5
-
11
-
-
10644231928
-
The induction of sexual development and virulence in the smut fungus Ustilago maydis depends on Crk1, a novel MAPK protein
-
Garrido, E., Voß, U., Müller, P., Castillo-Lluva, S., Kahmann, R., and Pérez-Martín, J. (2004). The induction of sexual development and virulence in the smut fungus Ustilago maydis depends on Crk1, a novel MAPK protein. Genes Dev. 18, 3117-3130.
-
(2004)
Genes Dev.
, vol.18
, pp. 3117-3130
-
-
Garrido, E.1
Voß, U.2
Müller, P.3
Castillo-Lluva, S.4
Kahmann, R.5
Pérez-Martín, J.6
-
12
-
-
84856585935
-
Phytozome: A comparative platform for green plant genomics
-
Goodstein, D. M., Shu, S., Howson, R., Neupane, R., Hayes, R. D., Fazo, J., et al. (2012). Phytozome: a comparative platform for green plant genomics. Nucleic Acids Res. 40, D1178-D1186.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Goodstein, D.M.1
Shu, S.2
Howson, R.3
Neupane, R.4
Hayes, R.D.5
Fazo, J.6
-
13
-
-
33646476164
-
Ancient signals: Comparative genomics of plant MAPK and MAPKK gene families
-
Hamel, L.-P., Nicole, M.-C., Sritubtim, S., Morency, M.-J., Ellis, M., Ehlting, J., et al. (2006). Ancient signals: comparative genomics of plant MAPK and MAPKK gene families. Trends Plant Sci. 11, 192-198.
-
(2006)
Trends Plant Sci.
, vol.11
, pp. 192-198
-
-
Hamel, L.-P.1
Nicole, M.-C.2
Sritubtim, S.3
Morency, M.-J.4
Ellis, M.5
Ehlting, J.6
-
14
-
-
79955468851
-
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
-
Hu, T. T., Pattyn, P., Bakker, E. G., Cao, J., Cheng, J.-F., Clark, R. M., et al. (2011). The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat. Genet. 43, 476-481.
-
(2011)
Nat. Genet.
, vol.43
, pp. 476-481
-
-
Hu, T.T.1
Pattyn, P.2
Bakker, E.G.3
Cao, J.4
Cheng, J.-F.5
Clark, R.M.6
-
15
-
-
79551550373
-
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift
-
doi:10.1371/journal.pone.0016219
-
Hua, Z., Shiu, S.-H., and Vierstra, R. (2011). Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PLoS ONE 6:e16219. doi:10.1371/journal.pone.0016219
-
(2011)
PLoS ONE
, vol.6
-
-
Hua, Z.1
Shiu, S.-H.2
Vierstra, R.3
-
16
-
-
77957073199
-
Comparative genomic analysis of mitogen activated protein kinase gene family in grapevine
-
Hyun, T. K., Kim, J.-S., Kwon, S.-Y., and Kim, S.-H. (2010). Comparative genomic analysis of mitogen activated protein kinase gene family in grapevine. Genes Genomics 32, 275-281.
-
(2010)
Genes Genomics
, vol.32
, pp. 275-281
-
-
Hyun, T.K.1
Kim, J.-S.2
Kwon, S.-Y.3
Kim, S.-H.4
-
17
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
Katoh, K., Kuma, K., Toh, H., and Miyata, T. (2005). MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33, 511-518.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
18
-
-
0034096201
-
Protein phosphatases and the regulation of mitogen-activated protein kinase signalling
-
Keyse, S. M. (2000). Protein phosphatases and the regulation of mitogen-activated protein kinase signalling. Curr. Opin. Cell Biol. 12, 186-192.
-
(2000)
Curr. Opin. Cell Biol.
, vol.12
, pp. 186-192
-
-
Keyse, S.M.1
-
19
-
-
0032524356
-
Phosphorylation of the MAP kinase ERK2 promotes its homodimerization and nuclear translocation
-
Khokhlatchev, A., Canagarajah, B., Wilsbacher, J., Robinson, M., Atkinson, M., Goldsmith, E., et al. (1998). Phosphorylation of the MAP kinase ERK2 promotes its homodimerization and nuclear translocation. Cell 93, 605-615.
-
(1998)
Cell
, vol.93
, pp. 605-615
-
-
Khokhlatchev, A.1
Canagarajah, B.2
Wilsbacher, J.3
Robinson, M.4
Atkinson, M.5
Goldsmith, E.6
-
20
-
-
34247200577
-
The AtGenExpress global stress expression data set: Protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses
-
Kilian, J., Whitehead, D., Horak, J., Wanke, D., Weinl, S., Batistic, O., et al. (2007). The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J. 50, 347-363.
-
(2007)
Plant J.
, vol.50
, pp. 347-363
-
-
Kilian, J.1
Whitehead, D.2
Horak, J.3
Wanke, D.4
Weinl, S.5
Batistic, O.6
-
21
-
-
80055048292
-
Evolutionary history of the vertebrate mitogen activated protein kinases family
-
doi:10.1371/journal.pone.0026999
-
Li, M., Liu, J., and Zhang, C. (2011). Evolutionary history of the vertebrate mitogen activated protein kinases family. PLoS ONE 6:e26999. doi:10.1371/journal.pone.0026999
-
(2011)
PLoS ONE
, vol.6
-
-
Li, M.1
Liu, J.2
Zhang, C.3
-
22
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado, P., and Rozas, J. (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25, 1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
23
-
-
77957896863
-
ProFITS of maize: A database of protein families involved in the transduction of signalling in the maize genome
-
doi:10.1186/1471-2164-11-580
-
Ling, Y., Du, Z., Zhang, Z., and Su, Z. (2010). ProFITS of maize: a database of protein families involved in the transduction of signalling in the maize genome. BMC Genomics 11:580. doi:10.1186/1471-2164-11-580
-
(2010)
BMC Genomics
, vol.11
, pp. 580
-
-
Ling, Y.1
Du, Z.2
Zhang, Z.3
Su, Z.4
-
24
-
-
0038714319
-
Mitogen-activated protein kinase cascades in plants: A new nomenclature
-
MAPK-Group, J
-
MAPK-Group, J., Ichimura, K., Tena, G., Sheen, J., Henry, Y., Champion, A., et al. (2002). Mitogen-activated protein kinase cascades in plants: a new nomenclature. Trends Plant Sci. 7, 301-308.
-
(2002)
Trends Plant Sci.
, vol.7
, pp. 301-308
-
-
Ichimura, K.1
Tena, G.2
Sheen, J.3
Henry, Y.4
Champion, A.5
-
25
-
-
33847324364
-
Cross-talk and decision making in MAP kinase pathways
-
McClean, M. N., Mody, A., Broach, J. R., and Ramanathan, S. (2007). Cross-talk and decision making in MAP kinase pathways. Nat. Genet. 39, 409-414.
-
(2007)
Nat. Genet.
, vol.39
, pp. 409-414
-
-
McClean, M.N.1
Mody, A.2
Broach, J.R.3
Ramanathan, S.4
-
26
-
-
35348896591
-
The chlamydomonas genome reveals the evolution of key animal and plant functions
-
Merchant, S. S., Prochnik, S. E., Vallon, O., Harris, E. H., Karpowicz, S. J., Witman, G. B., et al. (2007). The chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318, 245-250.
-
(2007)
Science
, vol.318
, pp. 245-250
-
-
Merchant, S.S.1
Prochnik, S.E.2
Vallon, O.3
Harris, E.H.4
Karpowicz, S.J.5
Witman, G.B.6
-
27
-
-
78751558547
-
Creating the CIPRES Science Gateway for inference of large phylogenetic trees
-
in, New Orleans
-
Miller, M.A., Pfeiffer, W., and Schwartz, T. (2010) "Creating the CIPRES Science Gateway for inference of large phylogenetic trees, " in Proceedings of the Gateway Computing Environments Workshop (GCE), New Orleans, 1-8.
-
(2010)
Proceedings of the Gateway Computing Environments Workshop (GCE)
, pp. 1-8
-
-
Miller, M.A.1
Pfeiffer, W.2
Schwartz, T.3
-
28
-
-
42949157236
-
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
-
Ming, R., Hou, S., Feng, Y., Yu, Q., Dionne-Laporte, A., Saw, J. H., et al. (2008). The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature 452, 991-996.
-
(2008)
Nature
, vol.452
, pp. 991-996
-
-
Ming, R.1
Hou, S.2
Feng, Y.3
Yu, Q.4
Dionne-Laporte, A.5
Saw, J.H.6
-
29
-
-
39149141072
-
AWTY (are we there yet?): A system for graphical exploration of MCMC convergence in Bayesian phylogenetics
-
Nylander, J. A. A., Wilgenbusch, J. C., Warren, D. L., and Swofford, D. L. (2008). AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24, 581-583.
-
(2008)
Bioinformatics
, vol.24
, pp. 581-583
-
-
Nylander, J.A.A.1
Wilgenbusch, J.C.2
Warren, D.L.3
Swofford, D.L.4
-
30
-
-
33846101405
-
The TIGR rice genome annotation resource: Improvements and new features
-
Ouyang, S., Zhu, W., Hamilton, J., Lin, H., Campbell, M., Childs, K., et al. (2007). The TIGR rice genome annotation resource: improvements and new features. Nucleic Acids Res. 35, D883-D887.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Ouyang, S.1
Zhu, W.2
Hamilton, J.3
Lin, H.4
Campbell, M.5
Childs, K.6
-
31
-
-
58449137410
-
The Sorghum bicolor genome and the diversification of grasses
-
Paterson, A. H., Bowers, J. E., Bruggmann, R., Dubchak, I., Grimwood, J., Gundlach, H., et al. (2009). The Sorghum bicolor genome and the diversification of grasses. Nature 457, 551-556.
-
(2009)
Nature
, vol.457
, pp. 551-556
-
-
Paterson, A.H.1
Bowers, J.E.2
Bruggmann, R.3
Dubchak, I.4
Grimwood, J.5
Gundlach, H.6
-
32
-
-
75649134588
-
PLAZA: A comparative genomics resource to study gene and genome evolution in plants
-
Proost, S., Van Bel, M., Sterck, L., Billiau, K., Van Parys, T., Van de Peer, Y., et al. (2009). PLAZA: a comparative genomics resource to study gene and genome evolution in plants. Plant Cell 21, 3718-3731.
-
(2009)
Plant Cell
, vol.21
, pp. 3718-3731
-
-
Proost, S.1
Van Bel, M.2
Sterck, L.3
Billiau, K.4
Van Parys, T.5
Van de Peer, Y.6
-
33
-
-
84867068639
-
A transcriptomic hourglass in plant embryogenesis
-
Quint, M., Drost, H.-G., Gabel, A., Ullrich, K. K., Bönn, M., and Grosse, I. (2012). A transcriptomic hourglass in plant embryogenesis. Nature 490, 98-101.
-
(2012)
Nature
, vol.490
, pp. 98-101
-
-
Quint, M.1
Drost, H.-G.2
Gabel, A.3
Ullrich, K.K.4
Bönn, M.5
Grosse, I.6
-
34
-
-
37849032457
-
The physcomitrella genome reveals evolutionary insights into the conquest of land by plants
-
Rensing, S. A., Lang, D., Zimmer, A. D., Terry, A., Salamov, A., Shapiro, H., et al. (2008). The physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319, 64-69.
-
(2008)
Science
, vol.319
, pp. 64-69
-
-
Rensing, S.A.1
Lang, D.2
Zimmer, A.D.3
Terry, A.4
Salamov, A.5
Shapiro, H.6
-
35
-
-
77952478526
-
Mitogen-activated protein kinase signaling in plants
-
Rodriguez, M., Petersen, M., and Mundy, J. (2010). Mitogen-activated protein kinase signaling in plants. Annu. Rev. Plant Biol. 61, 621-649.
-
(2010)
Annu. Rev. Plant Biol.
, vol.61
, pp. 621-649
-
-
Rodriguez, M.1
Petersen, M.2
Mundy, J.3
-
36
-
-
34347226711
-
Rice mitogen-activated protein kinase gene family and its role in biotic and abiotic stress response
-
Rohila, J. S., and Yang, Y. (2007). Rice mitogen-activated protein kinase gene family and its role in biotic and abiotic stress response. J. Integr. Plant Biol. 49, 751-759.
-
(2007)
J. Integr. Plant Biol.
, vol.49
, pp. 751-759
-
-
Rohila, J.S.1
Yang, Y.2
-
37
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F., and Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
38
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
Schmid, M., Davison, T. S., Henz, S. R., Pape, U. J., Demar, M., Vingron, M., et al. (2005). A gene expression map of Arabidopsis thaliana development. Nat. Genet. 37, 501-506.
-
(2005)
Nat. Genet.
, vol.37
, pp. 501-506
-
-
Schmid, M.1
Davison, T.S.2
Henz, S.R.3
Pape, U.J.4
Demar, M.5
Vingron, M.6
-
39
-
-
74549221016
-
Genome sequence of the palaeopolyploid soybean
-
Schmutz, J., Cannon, S. B., Schlueter, J., Ma, J., Mitros, T., Nelson, W., et al. (2010). Genome sequence of the palaeopolyploid soybean. Nature 463, 178-183.
-
(2010)
Nature
, vol.463
, pp. 178-183
-
-
Schmutz, J.1
Cannon, S.B.2
Schlueter, J.3
Ma, J.4
Mitros, T.5
Nelson, W.6
-
40
-
-
70450202132
-
The B73 maize genome: Complexity, diversity, and dynamics
-
Schnable, P. S., Ware, D., Fulton, R. S., Stein, J. C., Wei, F., Pasternak, S., et al. (2009). The B73 maize genome: complexity, diversity, and dynamics. Science 326, 1112-1115.
-
(2009)
Science
, vol.326
, pp. 1112-1115
-
-
Schnable, P.S.1
Ware, D.2
Fulton, R.S.3
Stein, J.C.4
Wei, F.5
Pasternak, S.6
-
41
-
-
79551716670
-
Molecular evolution and selection patterns of plant F-box proteins with C-Terminal kelch repeats
-
Schumann, N., Navarro-Quezada, A., Ullrich, K., Kuhl, C., and Quint, M. (2011). Molecular evolution and selection patterns of plant F-box proteins with C-Terminal kelch repeats. Plant Physiol. 155, 835-850.
-
(2011)
Plant Physiol.
, vol.155
, pp. 835-850
-
-
Schumann, N.1
Navarro-Quezada, A.2
Ullrich, K.3
Kuhl, C.4
Quint, M.5
-
42
-
-
33745612095
-
Pvclust: An R package for assessing the uncertainty in hierarchical clustering
-
Suzuki, R., and Shimodaira, H. (2006). Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22, 1540-1542.
-
(2006)
Bioinformatics
, vol.22
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
43
-
-
38549144806
-
The Arabidopsis information resource (TAIR): Gene structure and function annotation
-
Swarbreck, D., Wilks, C., Lamesch, P., Berardini, T. Z., Garcia-Hernandez, M., Foerster, H., et al. (2008). The Arabidopsis information resource (TAIR): gene structure and function annotation. Nucleic Acids Res. 36, D1009-D1014.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Swarbreck, D.1
Wilks, C.2
Lamesch, P.3
Berardini, T.Z.4
Garcia-Hernandez, M.5
Foerster, H.6
-
44
-
-
0021066244
-
Evolutionary relationship of DNA sequences in finite populations
-
Tajima, F. (1983). Evolutionary relationship of DNA sequences in finite populations. Genetics 105, 437-460.
-
(1983)
Genetics
, vol.105
, pp. 437-460
-
-
Tajima, F.1
-
45
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
46
-
-
0034874729
-
Plant mitogen-activated protein kinase signaling cascades
-
Tena, G., Asai, T., Chiu, W. L., and Sheen, J. (2001). Plant mitogen-activated protein kinase signaling cascades. Curr. Opin. Plant Biol. 4, 392-400.
-
(2001)
Curr. Opin. Plant Biol.
, vol.4
, pp. 392-400
-
-
Tena, G.1
Asai, T.2
Chiu, W.L.3
Sheen, J.4
-
47
-
-
34848886909
-
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
-
The French-Italian Public Consortium for Grapevine Genome Characterization
-
The French-Italian Public Consortium for Grapevine Genome Characterization. (2007). The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature 449, 463-467.
-
(2007)
Nature
, vol.449
, pp. 463-467
-
-
-
48
-
-
76749150030
-
Genome sequencing and analysis of the model grass Brachypodium distachyon
-
The International Brachypodium Initiative
-
The International Brachypodium Initiative. (2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463, 763-768.
-
(2010)
Nature
, vol.463
, pp. 763-768
-
-
-
49
-
-
0344464730
-
Libsequence: A C++ class library for evolutionary genetic analysis
-
Thornton, K. (2003). libsequence: a C++ class library for evolutionary genetic analysis. Bioinformatics 19, 2325-2327.
-
(2003)
Bioinformatics
, vol.19
, pp. 2325-2327
-
-
Thornton, K.1
-
50
-
-
22044437388
-
The botany array resource: E-Northerns, expression angling, and promoter analyses
-
Toufighi, K., Brady, S. M., Austin, R., Ly, E., and Provart, N. J. (2005). The botany array resource: e-Northerns, expression angling, and promoter analyses. Plant J. 43, 153-163.
-
(2005)
Plant J.
, vol.43
, pp. 153-163
-
-
Toufighi, K.1
Brady, S.M.2
Austin, R.3
Ly, E.4
Provart, N.J.5
-
51
-
-
33748760611
-
The genome of black cottonwood, populus trichocarpa (Torr. & Gray)
-
Tuskan, G. A., DiFazio, S., Jansson, S., Bohlmann, J., Grigoriev, I., Hellsten, U., et al. (2006). The genome of black cottonwood, populus trichocarpa (Torr. & Gray). Science 313, 1596-1604.
-
(2006)
Science
, vol.313
, pp. 1596-1604
-
-
Tuskan, G.A.1
DiFazio, S.2
Jansson, S.3
Bohlmann, J.4
Grigoriev, I.5
Hellsten, U.6
-
52
-
-
65449188232
-
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse, A. M., Procter, J. B., Martin, D. M. A., Clamp, M., and Barton, G. J. (2009). Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25, 1189-1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
53
-
-
0032422785
-
Structural organization of MAP-kinase signaling modules by scaffold proteins in yeast and mammals
-
Whitmarsh, A. J., and Davis, R. J. (1998). Structural organization of MAP-kinase signaling modules by scaffold proteins in yeast and mammals. Trends Biochem. Sci. 23, 481-485.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 481-485
-
-
Whitmarsh, A.J.1
Davis, R.J.2
-
54
-
-
0033979433
-
Estimating Synonymous and nonsynonymous substitution rates under realistic evolutionary models
-
Yang, Z., and Nielsen, R. (2000). Estimating Synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 17, 32-43.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
55
-
-
34248669040
-
KaKs_Calculator: Calculating Ka and Ks through model selection and model averaging
-
Zhang, Z., Li, J., Zhao, X.-Q., Wang, J., Wong, G. K.-S., and Yu, J. (2006). KaKs_Calculator: calculating Ka and Ks through model selection and model averaging. Genomics Proteomics Bioinformatics 4, 259-263.
-
(2006)
Genomics Proteomics Bioinformatics
, vol.4
, pp. 259-263
-
-
Zhang, Z.1
Li, J.2
Zhao, X.-Q.3
Wang, J.4
Wong, G.K.-S.5
Yu, J.6
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