메뉴 건너뛰기




Volumn 439, Issue 2, 2013, Pages 97-104

In vitro functional analyses of the human immunodeficiency virus type 1 (HIV-1) integrase mutants give new insights into the intasome assembly

Author keywords

Concerted DNA integration; HIV 1; Intasome; Integrase; Mutants

Indexed keywords

ALANINE; GLUTAMIC ACID; INTASOME; INTEGRASE; ISOLEUCINE; TETRAMER; UNCLASSIFIED DRUG; VIRUS DNA; VIRUS PROTEIN;

EID: 84875811590     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2013.02.001     Document Type: Article
Times cited : (8)

References (40)
  • 1
    • 79955769735 scopus 로고    scopus 로고
    • Architecture of a full-length retroviral integrase monomer and dimer, revealed by small angle X-ray scattering and chemical cross-linking
    • Bojja R.S., Andrake M.D., Weigand S., Merkel G., Yarychkivska O., Henderson A., Kummerling M., Skalka A.M. Architecture of a full-length retroviral integrase monomer and dimer, revealed by small angle X-ray scattering and chemical cross-linking. J. Biol. Chem 2011, 286(19):17047-17059.
    • (2011) J. Biol. Chem , vol.286 , Issue.19 , pp. 17047-17059
    • Bojja, R.S.1    Andrake, M.D.2    Weigand, S.3    Merkel, G.4    Yarychkivska, O.5    Henderson, A.6    Kummerling, M.7    Skalka, A.M.8
  • 2
    • 77951470419 scopus 로고    scopus 로고
    • Role of human immunodeficiency virus type 1 integrase in uncoating of the viral core
    • Briones M.S., Dobard C.W., Chow S.A. Role of human immunodeficiency virus type 1 integrase in uncoating of the viral core. J. Virol. 2010, 84(10):5181-5190.
    • (2010) J. Virol. , vol.84 , Issue.10 , pp. 5181-5190
    • Briones, M.S.1    Dobard, C.W.2    Chow, S.A.3
  • 4
    • 80055079953 scopus 로고    scopus 로고
    • Functional analyses of mutants of the central core domain of an Avian sarcoma/leukemia virus integrase
    • Charmetant J., Moreau K., Gallay K., Ballandras A., Gouet P., Ronfort C. Functional analyses of mutants of the central core domain of an Avian sarcoma/leukemia virus integrase. Virology 2011, 421(1):42-50.
    • (2011) Virology , vol.421 , Issue.1 , pp. 42-50
    • Charmetant, J.1    Moreau, K.2    Gallay, K.3    Ballandras, A.4    Gouet, P.5    Ronfort, C.6
  • 6
    • 0034681278 scopus 로고    scopus 로고
    • X-ray structure of simian immunodeficiency virus integrase containing the core and C-terminal domain (residues 50-293)-an initial glance of the viral DNA binding platform
    • Chen Z., Yan Y., Munshi S., Li Y., Zugay-Murphy J., Xu B., Witmer M., Felock P., Wolfe A., Sardana V., Emini E.A., Hazuda D., Kuo L.C. X-ray structure of simian immunodeficiency virus integrase containing the core and C-terminal domain (residues 50-293)-an initial glance of the viral DNA binding platform. J. Mol. Biol. 2000, 296(2):521-533.
    • (2000) J. Mol. Biol. , vol.296 , Issue.2 , pp. 521-533
    • Chen, Z.1    Yan, Y.2    Munshi, S.3    Li, Y.4    Zugay-Murphy, J.5    Xu, B.6    Witmer, M.7    Felock, P.8    Wolfe, A.9    Sardana, V.10    Emini, E.A.11    Hazuda, D.12    Kuo, L.C.13
  • 7
    • 0023838971 scopus 로고
    • Isolation of an integrated provirus of Moloney murine leukemia virus with long terminal repeats in inverted orientation: integration utilizing two U3 sequences
    • Colicelli J., Goff S.P. Isolation of an integrated provirus of Moloney murine leukemia virus with long terminal repeats in inverted orientation: integration utilizing two U3 sequences. J. Virol. 1988, 62(2):633-636.
    • (1988) J. Virol. , vol.62 , Issue.2 , pp. 633-636
    • Colicelli, J.1    Goff, S.P.2
  • 9
    • 84875805038 scopus 로고    scopus 로고
    • The PyMol Molecular Graphics Systems. The PyMOL User's Manual DeLano Scientific, LLC, Palo Alto, CA, USA.
    • DeLano, W.L., 2008. The PyMol Molecular Graphics Systems. The PyMOL User's Manual DeLano Scientific, LLC, Palo Alto, CA, USA.
    • (2008)
    • DeLano, W.L.1
  • 10
    • 13244281317 scopus 로고    scopus 로고
    • Coot: model-building tools for molecular graphics
    • Pt 12 Pt 1
    • Emsley P., Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D Biol. Crystallogr. 2004, 60:2126-2132. Pt 12 Pt 1.
    • (2004) Acta Crystallogr. D Biol. Crystallogr. , vol.60 , pp. 2126-2132
    • Emsley, P.1    Cowtan, K.2
  • 11
    • 77958010223 scopus 로고    scopus 로고
    • Reverse transcription and integration
    • Caister Academic Press, Norfolk, UK, R. Kurth, N. Bannert (Eds.)
    • Engelman A. Reverse transcription and integration. Retroviruses: Molecular biology, Genomics and Pathogenesis 2010, 129-159. Caister Academic Press, Norfolk, UK. R. Kurth, N. Bannert (Eds.).
    • (2010) Retroviruses: Molecular biology, Genomics and Pathogenesis , pp. 129-159
    • Engelman, A.1
  • 12
    • 0027179694 scopus 로고
    • Identification of discrete functional domains of HIV-1 integrase and their organization within an active multimeric complex
    • Engelman A., Bushman F.D., Craigie R. Identification of discrete functional domains of HIV-1 integrase and their organization within an active multimeric complex. EMBO J. 1993, 12(8):3269-3275.
    • (1993) EMBO J. , vol.12 , Issue.8 , pp. 3269-3275
    • Engelman, A.1    Bushman, F.D.2    Craigie, R.3
  • 13
    • 0028915128 scopus 로고
    • Multiple effects of mutations in human immunodeficiency virus type 1 integrase on viral replication
    • Engelman A., Englund G., Orenstein J.M., Martin M.A., Craigie R. Multiple effects of mutations in human immunodeficiency virus type 1 integrase on viral replication. J. Virol. 1995, 69(5):2729-2736.
    • (1995) J. Virol. , vol.69 , Issue.5 , pp. 2729-2736
    • Engelman, A.1    Englund, G.2    Orenstein, J.M.3    Martin, M.A.4    Craigie, R.5
  • 15
    • 64649089647 scopus 로고    scopus 로고
    • Biochemical and biophysical analyses of concerted (U5/U3) integration
    • Grandgenett D.P., Bera S., Pandey K.K., Vora A.C., Zahm J., Sinha S. Biochemical and biophysical analyses of concerted (U5/U3) integration. Methods 2009, 47(4):229-236.
    • (2009) Methods , vol.47 , Issue.4 , pp. 229-236
    • Grandgenett, D.P.1    Bera, S.2    Pandey, K.K.3    Vora, A.C.4    Zahm, J.5    Sinha, S.6
  • 16
    • 0033551443 scopus 로고    scopus 로고
    • The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity
    • Greenwald J., Le V., Butler S.L., Bushman F.D., Choe S. The mobility of an HIV-1 integrase active site loop is correlated with catalytic activity. Biochemistry 1999, 38(28):8892-8898.
    • (1999) Biochemistry , vol.38 , Issue.28 , pp. 8892-8898
    • Greenwald, J.1    Le, V.2    Butler, S.L.3    Bushman, F.D.4    Choe, S.5
  • 17
    • 77949365510 scopus 로고    scopus 로고
    • Retroviral intasome assembly and inhibition of DNA strand transfer
    • Hare S., Gupta S.S., Valkov E., Engelman A., Cherepanov P. Retroviral intasome assembly and inhibition of DNA strand transfer. Nature 2010, 464(7289):232-236.
    • (2010) Nature , vol.464 , Issue.7289 , pp. 232-236
    • Hare, S.1    Gupta, S.S.2    Valkov, E.3    Engelman, A.4    Cherepanov, P.5
  • 18
    • 0030875813 scopus 로고    scopus 로고
    • Mapping features of HIV-1 integrase near selected sites on viral and target DNA molecules in an active enzyme-DNA complex by photo-cross-linking
    • Heuer T.S., Brown P.O. Mapping features of HIV-1 integrase near selected sites on viral and target DNA molecules in an active enzyme-DNA complex by photo-cross-linking. Biochemistry 1997, 36(35):10655-10665.
    • (1997) Biochemistry , vol.36 , Issue.35 , pp. 10655-10665
    • Heuer, T.S.1    Brown, P.O.2
  • 19
    • 0032510707 scopus 로고    scopus 로고
    • Photo-cross-linking studies suggest a model for the architecture of an active human immunodeficiency virus type 1 integrase-DNA complex
    • Heuer T.S., Brown P.O. Photo-cross-linking studies suggest a model for the architecture of an active human immunodeficiency virus type 1 integrase-DNA complex. Biochemistry 1998, 37(19):6667-6678.
    • (1998) Biochemistry , vol.37 , Issue.19 , pp. 6667-6678
    • Heuer, T.S.1    Brown, P.O.2
  • 20
    • 65549105028 scopus 로고    scopus 로고
    • Piecing together the structure of retroviral integrase, an important target in AIDS therapy
    • Jaskolski M., Alexandratos J.N., Bujacz G., Wlodawer A. Piecing together the structure of retroviral integrase, an important target in AIDS therapy. FEBS J. 2009, 276(11):2926-2946.
    • (2009) FEBS J. , vol.276 , Issue.11 , pp. 2926-2946
    • Jaskolski, M.1    Alexandratos, J.N.2    Bujacz, G.3    Wlodawer, A.4
  • 21
    • 79960403326 scopus 로고    scopus 로고
    • Retroviral integrases promote fraying of viral DNA ends
    • Katz R.A., Merkel G., Andrake M.D., Roder H., Skalka A.M. Retroviral integrases promote fraying of viral DNA ends. J Biol. Chem. 2011, 286(29):25710-25718.
    • (2011) J Biol. Chem. , vol.286 , Issue.29 , pp. 25710-25718
    • Katz, R.A.1    Merkel, G.2    Andrake, M.D.3    Roder, H.4    Skalka, A.M.5
  • 24
    • 64649098171 scopus 로고    scopus 로고
    • Nucleoprotein complex intermediates in HIV-1 integration
    • Li M., Craigie R. Nucleoprotein complex intermediates in HIV-1 integration. Methods 2009, 47(4):237-242.
    • (2009) Methods , vol.47 , Issue.4 , pp. 237-242
    • Li, M.1    Craigie, R.2
  • 25
    • 84860873496 scopus 로고    scopus 로고
    • Correlation of recombinant integrase activity and functional preintegration complex formation during acute infection by replication-defective integrase mutant human immunodeficiency virus
    • Li X., Koh Y., Engelman A. Correlation of recombinant integrase activity and functional preintegration complex formation during acute infection by replication-defective integrase mutant human immunodeficiency virus. J. Virol. 2012, 86(7):3861-3879.
    • (2012) J. Virol. , vol.86 , Issue.7 , pp. 3861-3879
    • Li, X.1    Koh, Y.2    Engelman, A.3
  • 26
    • 13444269378 scopus 로고    scopus 로고
    • Genetic analyses of DNA-binding mutants in the catalytic core domain of human immunodeficiency virus type 1 integrase
    • Lu R., Limon A., Ghory H.Z., Engelman A. Genetic analyses of DNA-binding mutants in the catalytic core domain of human immunodeficiency virus type 1 integrase. J. Virol. 2005, 79(4):2493-2505.
    • (2005) J. Virol. , vol.79 , Issue.4 , pp. 2493-2505
    • Lu, R.1    Limon, A.2    Ghory, H.Z.3    Engelman, A.4
  • 27
    • 78149434355 scopus 로고    scopus 로고
    • The mechanism of retroviral integration from X-ray structures of its key intermediates
    • Maertens G.N., Hare S., Cherepanov P. The mechanism of retroviral integration from X-ray structures of its key intermediates. Nature 2010, 468(7321):326-329.
    • (2010) Nature , vol.468 , Issue.7321 , pp. 326-329
    • Maertens, G.N.1    Hare, S.2    Cherepanov, P.3
  • 28
    • 38349171250 scopus 로고    scopus 로고
    • Gag-processing defect of human immunodeficiency virus type 1 integrase E246 and G247 mutants is caused by activation of an overlapping 5' splice site
    • Mandal D., Feng Z., Stoltzfus C.M. Gag-processing defect of human immunodeficiency virus type 1 integrase E246 and G247 mutants is caused by activation of an overlapping 5' splice site. J. Virol. 2008, 82(3):1600-1604.
    • (2008) J. Virol. , vol.82 , Issue.3 , pp. 1600-1604
    • Mandal, D.1    Feng, Z.2    Stoltzfus, C.M.3
  • 30
    • 0036042078 scopus 로고    scopus 로고
    • Analysis of conserved and non-conserved amino acids critical for ALSV (Avian leukemia and sarcoma viruses) integrase functions in vitro
    • Moreau K., Faure C., Verdier G., Ronfort C. Analysis of conserved and non-conserved amino acids critical for ALSV (Avian leukemia and sarcoma viruses) integrase functions in vitro. Arch. Virol. 2002, 147(9):1761-1778.
    • (2002) Arch. Virol. , vol.147 , Issue.9 , pp. 1761-1778
    • Moreau, K.1    Faure, C.2    Verdier, G.3    Ronfort, C.4
  • 31
    • 1242283909 scopus 로고    scopus 로고
    • Mutational analyses of the core domain of Avian leukemia and sarcoma viruses integrase: critical residues for concerted integration and multimerization
    • Moreau K., Faure C., Violot S., Gouet P., Verdier G., Ronfort C. Mutational analyses of the core domain of Avian leukemia and sarcoma viruses integrase: critical residues for concerted integration and multimerization. Virology 2004, 318(2):566-581.
    • (2004) Virology , vol.318 , Issue.2 , pp. 566-581
    • Moreau, K.1    Faure, C.2    Violot, S.3    Gouet, P.4    Verdier, G.5    Ronfort, C.6
  • 32
    • 0344011674 scopus 로고    scopus 로고
    • Mutations in the C-terminal domain of ALSV (Avian Leukemia and Sarcoma Viruses) integrase alter the concerted DNA integration process in vitro
    • Moreau K., Faure C., Violot S., Verdier G., Ronfort C. Mutations in the C-terminal domain of ALSV (Avian Leukemia and Sarcoma Viruses) integrase alter the concerted DNA integration process in vitro. Eur. J. Biochem. 2003, 270(22):4426-4438.
    • (2003) Eur. J. Biochem. , vol.270 , Issue.22 , pp. 4426-4438
    • Moreau, K.1    Faure, C.2    Violot, S.3    Verdier, G.4    Ronfort, C.5
  • 33
    • 0034610241 scopus 로고    scopus 로고
    • In vivo retroviral integration: fidelity to size of the host DNA duplication might be reduced when integration occurs near sequences homologous to LTR ends
    • Moreau K., Torne-Celer C., Faure C., Verdier G., Ronfort C. In vivo retroviral integration: fidelity to size of the host DNA duplication might be reduced when integration occurs near sequences homologous to LTR ends. Virology 2000, 278(1):133-136.
    • (2000) Virology , vol.278 , Issue.1 , pp. 133-136
    • Moreau, K.1    Torne-Celer, C.2    Faure, C.3    Verdier, G.4    Ronfort, C.5
  • 34
    • 80755156291 scopus 로고    scopus 로고
    • The HIV-1 integrase monomer induces a specific interaction with LTR DNA for concerted integration
    • Pandey K.K., Bera S., Grandgenett D.P. The HIV-1 integrase monomer induces a specific interaction with LTR DNA for concerted integration. Biochemistry 2011, 50(45):9788-9796.
    • (2011) Biochemistry , vol.50 , Issue.45 , pp. 9788-9796
    • Pandey, K.K.1    Bera, S.2    Grandgenett, D.P.3
  • 36
    • 0020033548 scopus 로고
    • Long terminal repeat of murine retroviral DNAs: sequence analysis, host- proviral junctions, and preintegration site
    • Van Beveren C., Rands E., Chattopadhyay S.K., Lowy D.R., Verma I.M. Long terminal repeat of murine retroviral DNAs: sequence analysis, host- proviral junctions, and preintegration site. J. Virol. 1982, 41(2):542-556.
    • (1982) J. Virol. , vol.41 , Issue.2 , pp. 542-556
    • Van Beveren, C.1    Rands, E.2    Chattopadhyay, S.K.3    Lowy, D.R.4    Verma, I.M.5
  • 37
    • 0027246609 scopus 로고
    • Complementation between HIV integrase proteins mutated in different domains
    • van Gent D.C., Vink C., Groeneger A.A., Plasterk R.H. Complementation between HIV integrase proteins mutated in different domains. Embo J. 1993, 12(8):3261-3267.
    • (1993) Embo J. , vol.12 , Issue.8 , pp. 3261-3267
    • van Gent, D.C.1    Vink, C.2    Groeneger, A.A.3    Plasterk, R.H.4
  • 38
    • 0034681303 scopus 로고    scopus 로고
    • Crystal structure of an active two-domain derivative of Rous sarcoma virus integrase
    • Yang Z.N., Mueser T.C., Bushman F.D., Hyde C.C. Crystal structure of an active two-domain derivative of Rous sarcoma virus integrase. J. Mol. Biol. 2000, 296(2):535-548.
    • (2000) J. Mol. Biol. , vol.296 , Issue.2 , pp. 535-548
    • Yang, Z.N.1    Mueser, T.C.2    Bushman, F.D.3    Hyde, C.C.4
  • 39
    • 0033614815 scopus 로고    scopus 로고
    • Divalent cations stimulate preferential recognition of a viral DNA end by HIV-1 integrase
    • Yi J., Asante-Appiah E., Skalka A.M. Divalent cations stimulate preferential recognition of a viral DNA end by HIV-1 integrase. Biochemistry 1999, 38(26):8458-8468.
    • (1999) Biochemistry , vol.38 , Issue.26 , pp. 8458-8468
    • Yi, J.1    Asante-Appiah, E.2    Skalka, A.M.3
  • 40
    • 41949095115 scopus 로고    scopus 로고
    • Subunit-specific protein footprinting reveals significant structural rearrangements and a role for N-terminal Lys-14 of HIV-1 Integrase during viral DNA binding
    • Zhao Z., McKee C.J., Kessl J.J., Santos W.L., Daigle J.E., Engelman A., Verdine G., Kvaratskhelia M. Subunit-specific protein footprinting reveals significant structural rearrangements and a role for N-terminal Lys-14 of HIV-1 Integrase during viral DNA binding. J. Biol. Chem. 2008, 283(9):5632-5641.
    • (2008) J. Biol. Chem. , vol.283 , Issue.9 , pp. 5632-5641
    • Zhao, Z.1    McKee, C.J.2    Kessl, J.J.3    Santos, W.L.4    Daigle, J.E.5    Engelman, A.6    Verdine, G.7    Kvaratskhelia, M.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.