-
1
-
-
77949293856
-
Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score
-
Aguilar, I., I. Misztal, D. L. Johnson, A. Legarra, S. Tsuruta, and T. J. Lawlor. 2010. Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score. J. Dairy Sci. 93:743-752.
-
(2010)
J. Dairy Sci
, vol.93
, pp. 743-752
-
-
Aguilar, I.1
Misztal, I.2
Johnson, D.L.3
Legarra, A.4
Tsuruta, S.5
Lawlor, T.J.6
-
2
-
-
78650992306
-
Genome-wide markerassisted selection combining all pedigree phenotypic information with genotypic data in one step: An example using broiler chickens
-
Chen, C. Y., I. Misztal, I. Aguilar, S. Tsuruta, T. H. E. Meuwissen, S. E. Aggrey, T. Wing, and W. M. Muir. 2011. Genome-wide markerassisted selection combining all pedigree phenotypic information with genotypic data in one step: An example using broiler chickens. J. Anim. Sci. 89:23-28.
-
(2011)
J. Anim. Sci
, vol.89
, pp. 23-28
-
-
Chen, C.Y.1
Misztal, I.2
Aguilar, I.3
Tsuruta, S.4
Meuwissen, T.H.E.5
Aggrey, S.E.6
Wing, T.7
Muir, W.M.8
-
3
-
-
84858145181
-
Genomic prediction when some animals are not genotyped
-
Christensen, O. F., and M. S. Lund. 2010. Genomic prediction when some animals are not genotyped. Genet. Sel. Evol. 42:2.
-
(2010)
Genet. Sel. Evol
, vol.42
, pp. 2
-
-
Christensen, O.F.1
Lund, M.S.2
-
4
-
-
84871617098
-
Application of Bayesian least absolute shrinkage and selection operator (LASSO) and BayesCpi methods for genomic selection in French Holstein and Montbeliarde breeds
-
Colombani, C., A. Legarra, S. Fritz, F. Guillaume, P. Croiseau, V. Ducrocq, and C. Robert-Granie. 2013. Application of Bayesian least absolute shrinkage and selection operator (LASSO) and BayesCpi methods for genomic selection in French Holstein and Montbeliarde breeds. J. Dairy Sci. 96:575-591.
-
(2013)
J. Dairy Sci
, vol.96
, pp. 575-591
-
-
Colombani, C.1
Legarra, A.2
Fritz, S.3
Guillaume, F.4
Croiseau, P.5
Ducrocq, V.6
Robert-Granie, C.7
-
5
-
-
51349088703
-
Optimization of breeding schemes for sport horses
-
Dubois, C., E. Manfredi, and A. Ricard. 2008. Optimization of breeding schemes for sport horses. Livest. Sci. 118:99-112.
-
(2008)
Livest. Sci
, vol.118
, pp. 99-112
-
-
Dubois, C.1
Manfredi, E.2
Ricard, A.3
-
6
-
-
34848878031
-
Efficiency of past selection of the French Sport Horse: Selle Francais breed and suggestions for the future
-
Dubois, C., and A. Ricard. 2007. Efficiency of past selection of the French Sport Horse: Selle Francais breed and suggestions for the future. Livest. Sci. 112:161-171.
-
(2007)
Livest. Sci
, vol.112
, pp. 161-171
-
-
Dubois, C.1
Ricard, A.2
-
7
-
-
84860250119
-
Genomic selection in the French Lacaune dairy sheep breed
-
Duchemin, S. I., C. Colombani, A. Legarra, G. Baloche, H. Larroque, J. M. Astruc, F. Barillet, C. Robert-Granie, and E. Manfredi. 2012. Genomic selection in the French Lacaune dairy sheep breed. J. Dairy Sci. 95:2723-2733.
-
(2012)
J. Dairy Sci
, vol.95
, pp. 2723-2733
-
-
Duchemin, S.I.1
Colombani, C.2
Legarra, A.3
Baloche, G.4
Larroque, H.5
Astruc, J.M.6
Barillet, F.7
Robert-Granie, C.8
Manfredi, E.9
-
8
-
-
0001244316
-
Marker assisted selection using best linear unbiased prediction
-
Fernando, R. L., and M. Grossman. 1989. Marker assisted selection using best linear unbiased prediction. Genet. Sel. Evol. 21:467-477.
-
(1989)
Genet. Sel. Evol
, vol.21
, pp. 467-477
-
-
Fernando, R.L.1
Grossman, M.2
-
9
-
-
77949854404
-
Deregressing estimated breeding values and weighting information for genomic regression analyses
-
Garrick, D. J., J. F. Taylor, and R. L. Fernando. 2009. Deregressing estimated breeding values and weighting information for genomic regression analyses. Genet. Sel. Evol. 41:55.
-
(2009)
Genet. Sel. Evol
, vol.41
, pp. 55
-
-
Garrick, D.J.1
Taylor, J.F.2
Fernando, R.L.3
-
10
-
-
67349287476
-
Genomic selection: Prediction of accuracy and maximisation of long term response
-
Goddard, M. 2009. Genomic selection: Prediction of accuracy and maximisation of long term response. Genetica (The Hague) 136:245-257.
-
(2009)
Genetica (The Hague)
, vol.136
, pp. 245-257
-
-
Goddard, M.1
-
11
-
-
80755167697
-
Using the genomic relationship matrix to predict the accuracy of genomic selection
-
Goddard, M. E., B. J. Hayes, and T. H. E. Meuwissen. 2011. Using the genomic relationship matrix to predict the accuracy of genomic selection. J. Anim. Breed. Genet. 128:409-421.
-
(2011)
J. Anim. Breed. Genet
, vol.128
, pp. 409-421
-
-
Goddard, M.E.1
Hayes, B.J.2
Meuwissen, T.H.E.3
-
12
-
-
37249083895
-
The impact of genetic relationship information on genome-assisted breeding values
-
Habier, D., R. L. Fernando, and J. C. M. Dekkers. 2007. The impact of genetic relationship information on genome-assisted breeding values. Genetics 177:2389-2397.
-
(2007)
Genetics
, vol.177
, pp. 2389-2397
-
-
Habier, D.1
Fernando, R.L.2
Dekkers, J.C.M.3
-
13
-
-
79956199958
-
Extension of the bayesian alphabet for genomic selection
-
Habier, D., R. L. Fernando, K. Kizilkaya, and D. J. Garrick. 2011. Extension of the bayesian alphabet for genomic selection. BMC Bioinformatics 12:186.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 186
-
-
Habier, D.1
Fernando, R.L.2
Kizilkaya, K.3
Garrick, D.J.4
-
14
-
-
77952787476
-
The impact of genetic relationship information on genomic breeding values in German Holstein cattle
-
Habier, D., J. Tetens, F. R. Seefried, P. Lichtner, and G. Thaller. 2010. The impact of genetic relationship information on genomic breeding values in German Holstein cattle. Genet. Sel. Evol. 42:5.
-
(2010)
Genet. Sel. Evol
, vol.42
, pp. 5
-
-
Habier, D.1
Tetens, J.2
Seefried, F.R.3
Lichtner, P.4
Thaller, G.5
-
15
-
-
0032175246
-
Approximate reliability of genetic evaluations under an animal model
-
Harris, B., and D. Johnson. 1998. Approximate reliability of genetic evaluations under an animal model. J. Dairy Sci. 81:2723-2728.
-
(1998)
J. Dairy Sci
, vol.81
, pp. 2723-2728
-
-
Harris, B.1
Johnson, D.2
-
16
-
-
59349098163
-
Invited review: Genomic selection in dairy cattle: Progress and challenges
-
Hayes, B. J., P. J. Bowman, A. J. Chamberlain, and M. E. Goddard. 2009b. Invited review: Genomic selection in dairy cattle: Progress and challenges. J. Dairy Sci. 92:433-443.
-
(2009)
J. Dairy Sci
, vol.92
, pp. 433-443
-
-
Hayes, B.J.1
Bowman, P.J.2
Chamberlain, A.J.3
Goddard, M.E.4
-
17
-
-
77949782994
-
Accuracy of genomic breeding values in multibreed dairy cattle populations
-
Hayes, B. J., P. J. Bowman, A. C. Chamberlain, K. Verbyla, and M. E. Goddard. 2009a. Accuracy of genomic breeding values in multibreed dairy cattle populations. Genet. Sel. Evol. 41:51.
-
(2009)
Genet. Sel. Evol
, vol.41
, pp. 51
-
-
Hayes, B.J.1
Bowman, P.J.2
Chamberlain, A.C.3
Verbyla, K.4
Goddard, M.E.5
-
18
-
-
52649102962
-
Technical note: Prediction of breeding values using marker-derived relationship matrices
-
Hayes, B. J., and M. E. Goddard. 2008. Technical note: Prediction of breeding values using marker-derived relationship matrices. J. Anim. Sci. 86:2089-2092.
-
(2008)
J. Anim. Sci
, vol.86
, pp. 2089-2092
-
-
Hayes, B.J.1
Goddard, M.E.2
-
20
-
-
77649309232
-
A sequence polymorphism in MSTN predicts sprinting ability and racing stamina in thoroughbred horses
-
Hill, E. W., J. J. Gu, S. S. Eivers, R. G. Fonseca, B. A. McGivney, P. Govindarajan, N. Orr, L. M. Katz, and D. E. MacHugh. 2010. A sequence polymorphism in MSTN predicts sprinting ability and racing stamina in thoroughbred horses. PLoS ONE 5(1):e8645.
-
(2010)
PLoS ONE
, vol.5
, Issue.1
-
-
Hill, E.W.1
Gu, J.J.2
Eivers, S.S.3
Fonseca, R.G.4
McGivney, B.A.5
Govindarajan, P.6
Orr, N.7
Katz, L.M.8
Machugh, D.E.9
-
21
-
-
79959600829
-
The distribution of SNP marker effects for faecal worm egg count in sheep, and the feasibility of using these markers to predict genetic merit for resistance to worm infections
-
Kemper, K. E., D. L. Emery, S. C. Bishop, H. Oddy, B. J. Hayes, S. Dominik, J. M. Henshall, and M. E. Goddard. 2011. The distribution of SNP marker effects for faecal worm egg count in sheep, and the feasibility of using these markers to predict genetic merit for resistance to worm infections. Genet. Res. 93:203-219.
-
(2011)
Genet. Res
, vol.93
, pp. 203-219
-
-
Kemper, K.E.1
Emery, D.L.2
Bishop, S.C.3
Oddy, H.4
Hayes, B.J.5
Dominik, S.6
Henshall, J.M.7
Goddard, M.E.8
-
22
-
-
84859577638
-
-
Accessed 4 March 2013
-
Legarra, A., A. Ricard, and O. Filangi. 2010. GS3-Genomic selection, Gibbs sampling, Gauss Seidel and BayesCπ. http://snp.toulouse.inra.fr/~alegarra/. (Accessed 4 March 2013.)
-
(2010)
GS3-Genomic Selection, Gibbs Sampling, Gauss Seidel and BayesCπ
-
-
Legarra, A.1
Ricard, A.2
Filangi, O.3
-
24
-
-
72449137120
-
The accuracy of genomic selection in norwegian red cattle assessed by cross-validation
-
Luan, T., J. A. Woolliams, S. Lien, M. Kent, M. Svendsen, and T. H. E. Meuwissen. 2009. The accuracy of genomic selection in norwegian red cattle assessed by cross-validation. Genetics 183:1119-1126.
-
(2009)
Genetics
, vol.183
, pp. 1119-1126
-
-
Luan, T.1
Woolliams, J.A.2
Lien, S.3
Kent, M.4
Svendsen, M.5
Meuwissen, T.H.E.6
-
25
-
-
79955083587
-
Interbull validation test for genomic evaluations
-
Interbull, Uppsala, Sweden
-
Mantysaari, E. A., Z. Liu, and P. M. VanRaden. 2010. Interbull validation test for genomic evaluations. Bull. 41. Interbull, Uppsala, Sweden.
-
(2010)
Bull
, vol.41
-
-
Mantysaari, E.A.1
Liu, Z.2
Vanraden, P.M.3
-
26
-
-
37049007617
-
Whole genome linkage disequilibrium maps in cattle
-
McKay, S. D., R. D. Schnabel, B. M. Murdoch, L. K. Matukumalli, J. Aerts, W. Coppieters, D. Crews, E. Dias, C. A. Gill, C. Gao, H. Mannen, P. Stothard, Z. Q. Wang, C. P. Van Tassell, J. L. Williams, J. F. Taylor, and S. S. Moore. 2007. Whole genome linkage disequilibrium maps in cattle. BMC Genet. 8:74.
-
(2007)
BMC Genet
, vol.8
, pp. 74
-
-
McKay, S.D.1
Schnabel, R.D.2
Murdoch, B.M.3
Matukumalli, L.K.4
Aerts, J.5
Coppieters, W.6
Crews, D.7
Dias, E.8
Gill, C.A.9
Gao, C.10
Mannen, H.11
Stothard, P.12
Wang, Z.Q.13
van Tassell, C.P.14
Williams, J.L.15
Taylor, J.F.16
Moore, S.S.17
-
27
-
-
0035045051
-
Prediction of total genetic value using genome-wide dense marker maps
-
Meuwissen, T. H. E., B. J. Hayes, and M. E. Goddard. 2001. Prediction of total genetic value using genome-wide dense marker maps. Genetics 157:1819-1829.
-
(2001)
Genetics
, vol.157
, pp. 1819-1829
-
-
Meuwissen, T.H.E.1
Hayes, B.J.2
Goddard, M.E.3
-
28
-
-
79955121390
-
Differences among methods to validate genomic evaluations for dairy cattle
-
Olson, K. M., P. M. VanRaden, M. E. Tooker, and T. A. Cooper. 2011. Differences among methods to validate genomic evaluations for dairy cattle. J. Dairy Sci. 94:2613-2620.
-
(2011)
J. Dairy Sci
, vol.94
, pp. 2613-2620
-
-
Olson, K.M.1
Vanraden, P.M.2
Tooker, M.E.3
Cooper, T.A.4
-
29
-
-
76249105888
-
Genomic selection in poultry
-
Preisinger, R. 2010. Genomic selection in poultry. Zuchtungskunde 82:9-13.
-
(2010)
Zuchtungskunde
, vol.82
, pp. 9-13
-
-
Preisinger, R.1
-
30
-
-
84882698577
-
Breeding evaluations and breeding programs in France
-
Vienna, Austria
-
Ricard, A. 1997. Breeding evaluations and breeding programs in France. In 48th Ann. Meet. EAAP, Vienna, Austria. p. 374.
-
(1997)
48th Ann. Meet. EAAP
, pp. 374
-
-
Ricard, A.1
-
31
-
-
33745885274
-
Strategy for applying genome-wide selection in dairy cattle
-
Schaeffer, L. R. 2006. Strategy for applying genome-wide selection in dairy cattle. J. Anim. Breed. Genet. 123:218-223.
-
(2006)
J. Anim. Breed. Genet
, vol.123
, pp. 218-223
-
-
Schaeffer, L.R.1
-
32
-
-
2442595943
-
Special problems in genetic evaluation of performance traits in horse
-
Guelph, ON, Canada
-
Tavernier, A. 1994. Special problems in genetic evaluation of performance traits in horse. In 5th world congress on genetics applied to livestock production, Guelph, ON, Canada. p. 450-457.
-
(1994)
5th World Congress On Genetics Applied to Livestock Production
, pp. 450-457
-
-
Tavernier, A.1
-
33
-
-
33746056414
-
Review of genetic parameters estimated at stallion and young horse performance tests and their correlations with later results in dressage and show-jumping competition
-
Thorén Hellsten, E., A. Viklund, E. P. C. Koenen, A. Ricard, E. Bruns, and J. Philipsson. 2006. Review of genetic parameters estimated at stallion and young horse performance tests and their correlations with later results in dressage and show-jumping competition. Livest. Sci. 103:1-12.
-
(2006)
Livest. Sci
, vol.103
, pp. 1-12
-
-
Thorén, H.E.1
Viklund, A.2
Koenen, E.P.C.3
Ricard, A.4
Bruns, E.5
Philipsson, J.6
-
34
-
-
55849133422
-
Efficient methods to compute genomic predictions
-
VanRaden, P. M. 2008. Efficient methods to compute genomic predictions. J. Dairy Sci. 91:4414-4423.
-
(2008)
J. Dairy Sci
, vol.91
, pp. 4414-4423
-
-
Vanraden, P.M.1
-
35
-
-
58349092764
-
Invited review: Reliability of genomic predictions for North American Holstein bulls
-
VanRaden, P. M., C. P. Van Tassell, G. R. Wiggans, T. S. Sonstegard, R. D. Schnabel, J. F. Taylor, and F. S. Schenkel. 2009. Invited review: Reliability of genomic predictions for North American Holstein bulls. J. Dairy Sci. 92:16-24.
-
(2009)
J. Dairy Sci
, vol.92
, pp. 16-24
-
-
Vanraden, P.M.1
van Tassell, C.P.2
Wiggans, G.R.3
Sonstegard, T.S.4
Schnabel, R.D.5
Taylor, J.F.6
Schenkel, F.S.7
-
36
-
-
0026210775
-
Derivation, calculation, and use of national animal-model information
-
VanRaden, P. M., and G. R. Wiggans. 1991. Derivation, calculation, and use of national animal-model information. J. Dairy Sci. 74:2737-2746.
-
(1991)
J. Dairy Sci
, vol.74
, pp. 2737-2746
-
-
Vanraden, P.M.1
Wiggans, G.R.2
-
37
-
-
70449379045
-
Genome sequence, comparative analysis, and population genetics of the domestic horse
-
Broad Inst. Genome Sequencing Platform, and T. Broad Inst Whole Genome Assembly Team
-
Wade, C. M., E. Giulotto, S. Sigurdsson, M. Zoli, S. Gnerre, F. Imsland, T. L. Lear, D. L. Adelson, E. Bailey, R. R. Bellone, H. Blocker, O. Distl, R. C. Edgar, M. Garber, T. Leeb, E. Mauceli, J. N. MacLeod, M. C. T. Penedo, J. M. Raison, T. Sharpe, J. Vogel, L. Andersson, D. F. Antczak, T. Biagi, M. M. Binns, B. P. Chowdhary, S. J. Coleman, G. Della Valle, S. Fryc, G. Guerin, T. Hasegawa, E. W. Hill, J. Jurka, A. Kiialainen, G. Lindgren, J. Liu, E. Magnani, J. R. Mickelson, J. Murray, S. G. Nergadze, R. Onofrio, S. Pedroni, M. F. Piras, T. Raudsepp, M. Rocchi, K. H. Roed, O. A. Ryder, S. Searle, L. Skow, J. E. Swinburne, A. C. Syvanen, T. Tozaki, S. J. Valberg, M. Vaudin, J. R. White, M. C. Zody, Broad Inst. Genome Sequencing Platform, and T. Broad Inst Whole Genome Assembly Team, E. S. Lander, and K. Lindblad-Toh. 2009. Genome sequence, comparative analysis, and population genetics of the domestic horse. Science 326:865-867.
-
(2009)
Science
, vol.326
, pp. 865-867
-
-
Wade, C.M.1
Giulotto, E.2
Sigurdsson, S.3
Zoli, M.4
Gnerre, S.5
Imsland, F.6
Lear, T.L.7
Adelson, D.L.8
Bailey, E.9
Bellone, R.R.10
Blocker, H.11
Distl, O.12
Edgar, R.C.13
Garber, M.14
Leeb, T.15
Mauceli, E.16
Macleod, J.N.17
Penedo, M.C.T.18
Raison, J.M.19
Sharpe, T.20
Vogel, J.21
Andersson, L.22
Antczak, D.F.23
Biagi, T.24
Binns, M.M.25
Chowdhary, B.P.26
Coleman, S.J.27
della Valle, G.28
Fryc, S.29
Guerin, G.30
Hasegawa, T.31
Hill, E.W.32
Jurka, J.33
Kiialainen, A.34
Lindgren, G.35
Liu, J.36
Magnani, E.37
Mickelson, J.R.38
Murray, J.39
Nergadze, S.G.40
Onofrio, R.41
Pedroni, S.42
Piras, M.F.43
Raudsepp, T.44
Rocchi, M.45
Roed, K.H.46
Ryder, O.A.47
Searle, S.48
Skow, L.49
Swinburne, J.E.50
Syvanen, A.C.51
Tozaki, T.52
Valberg, S.J.53
Vaudin, M.54
White, J.R.55
Zody, M.C.56
more..
-
38
-
-
79960651679
-
Optimal strategies for the use of genomic selection in dairy cattle breeding programs
-
Wensch-Dorendorf, M., T. Yin, H. H. Swalve, and S. Konig. 2011. Optimal strategies for the use of genomic selection in dairy cattle breeding programs. J. Dairy Sci. 94:4140-4151.
-
(2011)
J. Dairy Sci
, vol.94
, pp. 4140-4151
-
-
Wensch-Dorendorf, M.1
Yin, T.2
Swalve, H.H.3
Konig, S.4
-
39
-
-
79952661182
-
Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model
-
Wolc, A., C. Stricker, J. Arango, P. Settar, J. E. Fulton, N. P. O'Sullivan, R. Preisinger, D. Habier, R. Fernando, D. J. Garrick, S. J. Lamont, and J. C. M. Dekkers. 2011. Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model. Genet. Sel. Evol. 43:5.
-
(2011)
Genet. Sel. Evol
, vol.43
, pp. 5
-
-
Wolc, A.1
Stricker, C.2
Arango, J.3
Settar, P.4
Fulton, J.E.5
O'Sullivan, N.P.6
Preisinger, R.7
Habier, D.8
Fernando, R.9
Garrick, D.J.10
Lamont, S.J.11
Dekkers, J.C.M.12
|