메뉴 건너뛰기




Volumn 189, Issue 2, 2013, Pages 250-257

Similar concentration and extraction recoveries allow for use of turnip crinkle virus as a process control for enteroviruses in water

Author keywords

Concentration efficiency; Enterovirus; PCR; Process control; Turnip crinkle virus; Virus

Indexed keywords

NUCLEIC ACID; SINGLE STRANDED RNA; SURFACE WATER; VIRUS RNA; WATER;

EID: 84875765312     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2013.02.013     Document Type: Article
Times cited : (9)

References (54)
  • 1
    • 64949157145 scopus 로고    scopus 로고
    • Comparison of methods for concentrating human adenoviruses, polyomavirus JC and noroviruses in source waters and drinking water using quantitative PCR
    • Albinana-Gimenez N., Clemente-Cesares P., Calgua B., Huguet J.M., Courtois S., Girones R. Comparison of methods for concentrating human adenoviruses, polyomavirus JC and noroviruses in source waters and drinking water using quantitative PCR. J. Virol. Methods 2009, 158:104-109.
    • (2009) J. Virol. Methods , vol.158 , pp. 104-109
    • Albinana-Gimenez, N.1    Clemente-Cesares, P.2    Calgua, B.3    Huguet, J.M.4    Courtois, S.5    Girones, R.6
  • 3
    • 77950345449 scopus 로고    scopus 로고
    • Evaluation of a novel electropositive filter for the concentration of viruses from diverse water matrices
    • Bennett H.B., O'Dell H.D., Norton G., Shin G., Hsu F.C., Meschke J.S. Evaluation of a novel electropositive filter for the concentration of viruses from diverse water matrices. Water Sci. Technol. 2010, 61:317-322.
    • (2010) Water Sci. Technol. , vol.61 , pp. 317-322
    • Bennett, H.B.1    O'Dell, H.D.2    Norton, G.3    Shin, G.4    Hsu, F.C.5    Meschke, J.S.6
  • 5
    • 1542409133 scopus 로고    scopus 로고
    • Preclinical evaluation of two real-time, reverse transcription-PCR assays for detection of the severe acute respiratory syndrome coronavirus
    • Bressler A.M., Nolte F.S. Preclinical evaluation of two real-time, reverse transcription-PCR assays for detection of the severe acute respiratory syndrome coronavirus. J. Clin. Microbiol. 2004, 42:987-991.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 987-991
    • Bressler, A.M.1    Nolte, F.S.2
  • 7
    • 32344442643 scopus 로고    scopus 로고
    • Evaluation of a method to re-use electropositive cartridge fi{ligature}lters for concentrating viruses from tap and river water
    • Cashdollar J.L., Dahling D.R. Evaluation of a method to re-use electropositive cartridge fi{ligature}lters for concentrating viruses from tap and river water. J. Virol. Methods 2006, 132:13-17.
    • (2006) J. Virol. Methods , vol.132 , pp. 13-17
    • Cashdollar, J.L.1    Dahling, D.R.2
  • 8
    • 84879076306 scopus 로고    scopus 로고
    • Methods for primary concentration of viruses from water samples: a review and meta-analysis of recent studies
    • Cashdollar J.L., Wymer L. Methods for primary concentration of viruses from water samples: a review and meta-analysis of recent studies. J. Appl. Microbiol. 2013, 10.1111/jam.12143.
    • (2013) J. Appl. Microbiol.
    • Cashdollar, J.L.1    Wymer, L.2
  • 9
    • 83555178354 scopus 로고    scopus 로고
    • Microbial water quality before and after the repair of a failing onsite wastewater treatment system adjacent to coastal waters
    • Conn K.E., Habteselassie M.Y., Blackwood A.D., Noble R.T. Microbial water quality before and after the repair of a failing onsite wastewater treatment system adjacent to coastal waters. J. Appl. Microbiol. 2011, 112:214-224.
    • (2011) J. Appl. Microbiol. , vol.112 , pp. 214-224
    • Conn, K.E.1    Habteselassie, M.Y.2    Blackwood, A.D.3    Noble, R.T.4
  • 10
    • 33745152691 scopus 로고    scopus 로고
    • Development, evaluation, and stadardization of a real-time TaqMan reverse-transcription-PCR assay for quantification of a hepatitis A virus in clinical and shellfish samples
    • Costafreda M.I., Bosch A., Pinto R.M. Development, evaluation, and stadardization of a real-time TaqMan reverse-transcription-PCR assay for quantification of a hepatitis A virus in clinical and shellfish samples. Appl. Environ. Microbiol. 2006, 72:3846-3855.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 3846-3855
    • Costafreda, M.I.1    Bosch, A.2    Pinto, R.M.3
  • 11
    • 37349023992 scopus 로고    scopus 로고
    • Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: Different behaviors of genogroups
    • da Silva A.K., Saux J.-C.L., Parnaudeau S., Pommepuy M., Elimelech M., Guyader F.S.L. Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: Different behaviors of genogroups. Appl. Environ. Microbiol. 2007, 73:7891-7897.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 7891-7897
    • da Silva, A.K.1    Saux, J.-C.L.2    Parnaudeau, S.3    Pommepuy, M.4    Elimelech, M.5    Guyader, F.S.L.6
  • 12
    • 0036878074 scopus 로고    scopus 로고
    • An improved filter elution and cell culture assay procedure for evaluating public groundwater systems for culturable enteroviruses
    • Dahling D.R. An improved filter elution and cell culture assay procedure for evaluating public groundwater systems for culturable enteroviruses. Water Environ. Res. 2002, 74:564-568.
    • (2002) Water Environ. Res. , vol.74 , pp. 564-568
    • Dahling, D.R.1
  • 14
    • 79958265422 scopus 로고    scopus 로고
    • Development and validation of a concentration method for the detection of Influenza A Viruses from large volumes of surface water
    • Deboosere N., Horm S.V., Pinon A., Gachet J., Coldefy C., Buchy P., Vialette M. Development and validation of a concentration method for the detection of Influenza A Viruses from large volumes of surface water. Appl. Environ. Microbiol. 2011, 77:3802-3808.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 3802-3808
    • Deboosere, N.1    Horm, S.V.2    Pinon, A.3    Gachet, J.4    Coldefy, C.5    Buchy, P.6    Vialette, M.7
  • 15
    • 24744438458 scopus 로고    scopus 로고
    • Use of MS2 as an internal control in viral reverse transcription-PCR assays
    • Dreier J., Sto ̈rmer M., Kleesiek K. Use of MS2 as an internal control in viral reverse transcription-PCR assays. J. Clin. Microbiol. 2005, 43:4551-4557.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 4551-4557
    • Dreier, J.1    Störmer, M.2    Kleesiek, K.3
  • 16
    • 0034747327 scopus 로고    scopus 로고
    • TaqMan 5'-nuclease human immunodeficiency virus type 1 PCR assay with phage-packaged competitive internal control for high-throughput blood donor screening
    • Drosten C., Seifried E., Roth W.K. TaqMan 5'-nuclease human immunodeficiency virus type 1 PCR assay with phage-packaged competitive internal control for high-throughput blood donor screening. J. Clin. Microbiol. 2001, 39:4302-4308.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 4302-4308
    • Drosten, C.1    Seifried, E.2    Roth, W.K.3
  • 17
    • 1242291829 scopus 로고    scopus 로고
    • Use of an internal positive control in a multiplex reverse transcription-PCR to detect West Nile virus RNA in mosquito pools
    • Eisler D.L., McNabb A., Jorgensen D.R., Isaac-Renton J.L. Use of an internal positive control in a multiplex reverse transcription-PCR to detect West Nile virus RNA in mosquito pools. J. Clin. Microbiol. 2004, 42:841-843.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 841-843
    • Eisler, D.L.1    McNabb, A.2    Jorgensen, D.R.3    Isaac-Renton, J.L.4
  • 18
    • 0017256456 scopus 로고
    • Concentration of viruses from large volumes of tap water using pleated membrane filters
    • Farrah S.R., Gerba C.P., Wallis C., Melnick J.L. Concentration of viruses from large volumes of tap water using pleated membrane filters. Appl. Environ. Microbiol. 1976, 31:221-226.
    • (1976) Appl. Environ. Microbiol. , vol.31 , pp. 221-226
    • Farrah, S.R.1    Gerba, C.P.2    Wallis, C.3    Melnick, J.L.4
  • 20
    • 23744500070 scopus 로고    scopus 로고
    • Rapid detection of enteroviruses from small volumes of natural waters by real-time RT-PCR
    • Fuhrman J.A., Liang X., Noble R.T. Rapid detection of enteroviruses from small volumes of natural waters by real-time RT-PCR. Appl. Environ. Microbiol. 2005, 71:4523-4530.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 4523-4530
    • Fuhrman, J.A.1    Liang, X.2    Noble, R.T.3
  • 22
    • 0017950876 scopus 로고
    • Concentration of enteroviruses from large volumes of tap water, treated sewage, and seawater
    • Gerba C.P., Farrah S.R., Goyal S.M., Wallis C., Melnick J.L. Concentration of enteroviruses from large volumes of tap water, treated sewage, and seawater. Appl. Environ. Microbiol. 1978, 35:540-548.
    • (1978) Appl. Environ. Microbiol. , vol.35 , pp. 540-548
    • Gerba, C.P.1    Farrah, S.R.2    Goyal, S.M.3    Wallis, C.4    Melnick, J.L.5
  • 24
    • 33745143946 scopus 로고    scopus 로고
    • Rapid one-step quantitative reverse transcriptase PCR assay with competitive internal positive control for detection of enteroviruses in environmental samples
    • Gregory J.B., Litaker R.W., Noble R.T. Rapid one-step quantitative reverse transcriptase PCR assay with competitive internal positive control for detection of enteroviruses in environmental samples. Appl. Environ. Microbiol. 2006, 72:3960-3967.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 3960-3967
    • Gregory, J.B.1    Litaker, R.W.2    Noble, R.T.3
  • 26
    • 67549084344 scopus 로고    scopus 로고
    • Recovery of human norovirus from water by virus concentration methods
    • Haramoto E., Katayama H., Utagawa E., Ohgaki S. Recovery of human norovirus from water by virus concentration methods. J. Virol. Methods 2009, 160:206-209.
    • (2009) J. Virol. Methods , vol.160 , pp. 206-209
    • Haramoto, E.1    Katayama, H.2    Utagawa, E.3    Ohgaki, S.4
  • 27
    • 79960088767 scopus 로고    scopus 로고
    • Validation of internal controls for nucleic acid extraction and amplification of enteric viruses in water samples
    • Hata A., Katayama H., Kitajima M., Visvanathan C., Nol C., Furumai H. Validation of internal controls for nucleic acid extraction and amplification of enteric viruses in water samples. Appl. Environ. Microbiol. 2011, 77:4336-4343.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 4336-4343
    • Hata, A.1    Katayama, H.2    Kitajima, M.3    Visvanathan, C.4    Nol, C.5    Furumai, H.6
  • 28
    • 13544256490 scopus 로고    scopus 로고
    • Comparison of Enterococcus measurements in freshwater at two recreational beaches by quantitative polymerase chain reaction and membrane filter culture analysis
    • Haugland R.A., Siefring S.C., Wymer L.J., Brenner K.P., Dufour A.P. Comparison of Enterococcus measurements in freshwater at two recreational beaches by quantitative polymerase chain reaction and membrane filter culture analysis. Water Res. 2005, 39:559-568.
    • (2005) Water Res. , vol.39 , pp. 559-568
    • Haugland, R.A.1    Siefring, S.C.2    Wymer, L.J.3    Brenner, K.P.4    Dufour, A.P.5
  • 29
  • 31
    • 64749086169 scopus 로고    scopus 로고
    • New electropositive filter for concentrating enterovirus and norovirus from large volumes of water
    • Karim M.K., Rhodes E.R., Brinkman N., Wymer L., Fout G.S. New electropositive filter for concentrating enterovirus and norovirus from large volumes of water. Appl. Environ. Microbiol. 2009, 75:2393-2399.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 2393-2399
    • Karim, M.K.1    Rhodes, E.R.2    Brinkman, N.3    Wymer, L.4    Fout, G.S.5
  • 32
    • 44249116051 scopus 로고    scopus 로고
    • Concentration of enteroviruses, adenoviruses, and noroviruses from drinking water by use of glass wool filters
    • Lambertini E., Spencer S.K., Bertz P.D., Loge F.J., Kiek B.A., Borchardt M.A. Concentration of enteroviruses, adenoviruses, and noroviruses from drinking water by use of glass wool filters. Appl. Environ. Microbiol. 2008, 74:2990-2996.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 2990-2996
    • Lambertini, E.1    Spencer, S.K.2    Bertz, P.D.3    Loge, F.J.4    Kiek, B.A.5    Borchardt, M.A.6
  • 33
    • 79953306785 scopus 로고    scopus 로고
    • Evaluation of electropositive filtration for recovering norovirus in water
    • Lee H., Kim M., Paik S.Y., Lee C.H., Jheong W.H., Kim J., Ko G. Evaluation of electropositive filtration for recovering norovirus in water. J. Water Health 2011, 9:27-36.
    • (2011) J. Water Health , vol.9 , pp. 27-36
    • Lee, H.1    Kim, M.2    Paik, S.Y.3    Lee, C.H.4    Jheong, W.H.5    Kim, J.6    Ko, G.7
  • 34
    • 0033994237 scopus 로고    scopus 로고
    • Influence of environmental factors on virus detection by RT-PCR and cell culture
    • Lewis G.D., Molloy S.L., Greening G.E., Dawson J. Influence of environmental factors on virus detection by RT-PCR and cell culture. J. Appl. Microbiol. 2000, 88:633-640.
    • (2000) J. Appl. Microbiol. , vol.88 , pp. 633-640
    • Lewis, G.D.1    Molloy, S.L.2    Greening, G.E.3    Dawson, J.4
  • 35
    • 77649184582 scopus 로고    scopus 로고
    • Concentration of viruses from environmental waters using nanoalumina fiber filters
    • Li D., Shi H.C., Jiang S.C. Concentration of viruses from environmental waters using nanoalumina fiber filters. J. Microbiol. Methods 2010, 81:33-38.
    • (2010) J. Microbiol. Methods , vol.81 , pp. 33-38
    • Li, D.1    Shi, H.C.2    Jiang, S.C.3
  • 36
    • 0000498918 scopus 로고
    • Evaluation of indirect enzyme-linked immunosorbent assay for the detection of plant viruses
    • Lommel S.A., McCain A.H., Morris T.J. Evaluation of indirect enzyme-linked immunosorbent assay for the detection of plant viruses. Phytopathology 1982, 72:1018-1022.
    • (1982) Phytopathology , vol.72 , pp. 1018-1022
    • Lommel, S.A.1    McCain, A.H.2    Morris, T.J.3
  • 37
    • 77954487895 scopus 로고    scopus 로고
    • Isoelectric points of viruses
    • Michen B., Graule T. Isoelectric points of viruses. J. Appl. Microbiol. 2010, 109:388-397.
    • (2010) J. Appl. Microbiol. , vol.109 , pp. 388-397
    • Michen, B.1    Graule, T.2
  • 39
    • 75249084944 scopus 로고    scopus 로고
    • Effects of technological processes on the tenacity and inactivation of norovirus genogroup II in experimentally contaminated foods
    • Mormann S., Dabisch M., Becker B. Effects of technological processes on the tenacity and inactivation of norovirus genogroup II in experimentally contaminated foods. Appl. Environ. Microbiol. 2010, 76:536-545.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 536-545
    • Mormann, S.1    Dabisch, M.2    Becker, B.3
  • 40
    • 33144460975 scopus 로고    scopus 로고
    • Multitiered approach using quantitative PCR to track sources of fecal pollution affecting Santa Monica Bay, California
    • Noble R.T., Griffith J.F., Blackwood A.D. Multitiered approach using quantitative PCR to track sources of fecal pollution affecting Santa Monica Bay, California. Appl. Environ. Microbiol. 2006, 72:1604-1612.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 1604-1612
    • Noble, R.T.1    Griffith, J.F.2    Blackwood, A.D.3
  • 41
    • 84863496306 scopus 로고    scopus 로고
    • Towards a rational strategy for monitoring of microbiological quality of ambient waters
    • Poma H.R., Cacciabue D.G., Garce B., Gonzo E.E., Rajal V.B. Towards a rational strategy for monitoring of microbiological quality of ambient waters. Sci. Total Environ. 2012, 433:98-109.
    • (2012) Sci. Total Environ. , vol.433 , pp. 98-109
    • Poma, H.R.1    Cacciabue, D.G.2    Garce, B.3    Gonzo, E.E.4    Rajal, V.B.5
  • 43
    • 34547753377 scopus 로고    scopus 로고
    • The Viruses and Their Replication
    • Lippincott Williams & Wilkins, Philadelphia, PA, B.N. Fields, P.M. Howley (Eds.)
    • Racaniello V.R. The Viruses and Their Replication. Fields' Virology 2007, Lippincott Williams & Wilkins, Philadelphia, PA. fifth ed. B.N. Fields, P.M. Howley (Eds.).
    • (2007) Fields' Virology
    • Racaniello, V.R.1
  • 44
    • 33847715501 scopus 로고    scopus 로고
    • Validation of hollow fiber ultrafiltration and real-time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples
    • Rajal V.B., McSwain B.S., Thompson D.E., Leutenegger C.M., Kildare B.J., Wuertz S. Validation of hollow fiber ultrafiltration and real-time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples. Water Res. 2007, 41:1411-1422.
    • (2007) Water Res. , vol.41 , pp. 1411-1422
    • Rajal, V.B.1    McSwain, B.S.2    Thompson, D.E.3    Leutenegger, C.M.4    Kildare, B.J.5    Wuertz, S.6
  • 46
    • 34547476651 scopus 로고    scopus 로고
    • Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution
    • Santo Domingo J.W., Bambic D.G., Edge T.A., Wuertz S. Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution. Water Res. 2007, 41:3539-3552.
    • (2007) Water Res. , vol.41 , pp. 3539-3552
    • Santo Domingo, J.W.1    Bambic, D.G.2    Edge, T.A.3    Wuertz, S.4
  • 47
    • 0021965611 scopus 로고
    • Modified membrane-filter procedure for concentration of enteroviruses from tap water
    • Shields P.A., Berenfeld S.A., Farrah S.R. Modified membrane-filter procedure for concentration of enteroviruses from tap water. Appl. Environ. Microbiol. 1985, 49:453-455.
    • (1985) Appl. Environ. Microbiol. , vol.49 , pp. 453-455
    • Shields, P.A.1    Berenfeld, S.A.2    Farrah, S.R.3
  • 49
    • 85172044560 scopus 로고    scopus 로고
    • USEPA. Report of the Experts Scientific Workshop on Critical Research Needs for the Development of New or Revised Recreational Water Quality Criteria. US Environmental Protection Agency, Washington, DC
    • USEPA, 2007. Report of the Experts Scientific Workshop on Critical Research Needs for the Development of New or Revised Recreational Water Quality Criteria. US Environmental Protection Agency, Washington, DC.
    • (2007)
  • 50
    • 80052240449 scopus 로고    scopus 로고
    • Swimmer risk of gastrointestinal illness from exposure to tropical coastal waters impacted by terrestrial dry-weather runoff
    • Viau E.J., Lee D., Boehm A.B. Swimmer risk of gastrointestinal illness from exposure to tropical coastal waters impacted by terrestrial dry-weather runoff. Environ. Sci. Technol. 2011, 45:7158-7165.
    • (2011) Environ. Sci. Technol. , vol.45 , pp. 7158-7165
    • Viau, E.J.1    Lee, D.2    Boehm, A.B.3
  • 53
    • 33748702280 scopus 로고    scopus 로고
    • Evaluation of methods used to concentrate and detect hepatitis A virus in water samples
    • Villar L.M., de Paula V.S., Diniz-Mendes L., Lampe E., Gaspar A.M.C. Evaluation of methods used to concentrate and detect hepatitis A virus in water samples. J. Virol. Methods 2006, 137:169-176.
    • (2006) J. Virol. Methods , vol.137 , pp. 169-176
    • Villar, L.M.1    de Paula, V.S.2    Diniz-Mendes, L.3    Lampe, E.4    Gaspar, A.M.C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.