-
1
-
-
0034126848
-
Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes
-
Bernhard A.E., and Field K.G. Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes. Appl. Environ. Microbiol. 66 4 (2000) 1587-1594
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, Issue.4
, pp. 1587-1594
-
-
Bernhard, A.E.1
Field, K.G.2
-
2
-
-
0025089978
-
Rapid and simple method for purification of nucleic acids
-
Boom R., Sol C.J.A., Salimans M.M.M., Jansen C.L., Wertheimvandillen P.M.E., and Vandernoordaa J. Rapid and simple method for purification of nucleic acids. J. Clin. Microbiol. 28 3 (1990) 495-503
-
(1990)
J. Clin. Microbiol.
, vol.28
, Issue.3
, pp. 495-503
-
-
Boom, R.1
Sol, C.J.A.2
Salimans, M.M.M.3
Jansen, C.L.4
Wertheimvandillen, P.M.E.5
Vandernoordaa, J.6
-
3
-
-
0031889693
-
Reverse transcriptase (RT) inhibition of PCR at low concentrations of template and its implications for quantitative RT-PCR
-
Chandler D.P., Wagnon C.A., and Bolton H. Reverse transcriptase (RT) inhibition of PCR at low concentrations of template and its implications for quantitative RT-PCR. Appl. Environ. Microbiol. 64 2 (1998) 669-677
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, Issue.2
, pp. 669-677
-
-
Chandler, D.P.1
Wagnon, C.A.2
Bolton, H.3
-
4
-
-
0035988029
-
Detection, quantitation and identification of enteroviruses from surface waters and sponge tissue from the Florida Keys using real-time RT-PCR
-
Donaldson K.A., Griffin D.W., and Paul J.H. Detection, quantitation and identification of enteroviruses from surface waters and sponge tissue from the Florida Keys using real-time RT-PCR. Water Res. 36 10 (2002) 2505-2514
-
(2002)
Water Res.
, vol.36
, Issue.10
, pp. 2505-2514
-
-
Donaldson, K.A.1
Griffin, D.W.2
Paul, J.H.3
-
5
-
-
0003425384
-
-
Eaton, A.D., Clesceri, L.S., Rice, E.W., Greenberg, A.E., American Public Health Association, American Water Works Association and Water Environment Federation, American Public Health Association, Washington, DC
-
Eaton, A.D., Clesceri, L.S., Rice, E.W., Greenberg, A.E., American Public Health Association, American Water Works Association and Water Environment Federation. Standard Methods for the Examination of Water and Wastewater (2005), American Public Health Association, Washington, DC
-
(2005)
Standard Methods for the Examination of Water and Wastewater
-
-
-
6
-
-
22044434683
-
Quantitative PCR-enhanced immunoassay for measurement of enteroviral immunoglobulin M antibody and diagnosis of aseptic meningitis
-
Elfaitouri A., Mohamed N., Fohlman J., Aspholm R., Frisk G., Friman G., Magnius L., and Blomberg J. Quantitative PCR-enhanced immunoassay for measurement of enteroviral immunoglobulin M antibody and diagnosis of aseptic meningitis. Clin. Diagn. Lab. Immunol. 12 2 (2005) 235-241
-
(2005)
Clin. Diagn. Lab. Immunol.
, vol.12
, Issue.2
, pp. 235-241
-
-
Elfaitouri, A.1
Mohamed, N.2
Fohlman, J.3
Aspholm, R.4
Frisk, G.5
Friman, G.6
Magnius, L.7
Blomberg, J.8
-
7
-
-
3242791897
-
Combined immunomagnetic separation-molecular beacon-reverse transcription-PCR assay for detection of hepatitis A virus from environmental samples
-
El Galil K.H.A., El Sokkary M.A., Kheira S.M., Salazar A.M., Yates M.V., Chen W., and Mulchandani A. Combined immunomagnetic separation-molecular beacon-reverse transcription-PCR assay for detection of hepatitis A virus from environmental samples. Appl. Environ. Microbiol. 70 7 (2004) 4371-4374
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, Issue.7
, pp. 4371-4374
-
-
El Galil, K.H.A.1
El Sokkary, M.A.2
Kheira, S.M.3
Salazar, A.M.4
Yates, M.V.5
Chen, W.6
Mulchandani, A.7
-
8
-
-
23744500070
-
Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR
-
Fuhrman J.A., Liang X.L., and Noble R.T. Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR. Appl. Environ. Microbiol. 71 8 (2005) 4523-4530
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, Issue.8
, pp. 4523-4530
-
-
Fuhrman, J.A.1
Liang, X.L.2
Noble, R.T.3
-
9
-
-
18444392727
-
Quantification of enterococci and human adenoviruses in environmental samples by real-time PCR
-
He J.W., and Jiang S. Quantification of enterococci and human adenoviruses in environmental samples by real-time PCR. Appl. Environ. Microbiol. 71 5 (2005) 2250-2255
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, Issue.5
, pp. 2250-2255
-
-
He, J.W.1
Jiang, S.2
-
10
-
-
35348977257
-
-
Jiang, S., 2006. Molecular alternatives to indicator and pathogen detection: real-time PCR. WERF Report: Protecting Human Health (Project 01-HHE-2A). IWA Publishing, London.
-
-
-
-
11
-
-
3042742573
-
PCR detection of pathogenic viruses in southern California urban rivers
-
Jiang S.C., and Chu W. PCR detection of pathogenic viruses in southern California urban rivers. J. Appl. Microbiol. 97 1 (2004) 17-28
-
(2004)
J. Appl. Microbiol.
, vol.97
, Issue.1
, pp. 17-28
-
-
Jiang, S.C.1
Chu, W.2
-
12
-
-
0035163073
-
Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California
-
Jiang S., Noble R., and Chui W.P. Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California. Appl. Environ. Microbiol. 67 1 (2001) 179-184
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, Issue.1
, pp. 179-184
-
-
Jiang, S.1
Noble, R.2
Chui, W.P.3
-
13
-
-
27744464193
-
Real-time quantitative PCR for enteric adenovirus serotype 40 in environmental waters
-
Jiang S., Dezfulian H., and Chu W.P. Real-time quantitative PCR for enteric adenovirus serotype 40 in environmental waters. Can. J. Microbiol. 51 5 (2005) 393-398
-
(2005)
Can. J. Microbiol.
, vol.51
, Issue.5
, pp. 393-398
-
-
Jiang, S.1
Dezfulian, H.2
Chu, W.P.3
-
14
-
-
20444410725
-
Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41
-
Jothikumar N., Cromeans T.L., Hill V.R., Lu X., Sobsey M.D., and Erdman D.D. Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41. Appl. Environ. Microbiol. 71 6 (2005) 3131-3136
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, Issue.6
, pp. 3131-3136
-
-
Jothikumar, N.1
Cromeans, T.L.2
Hill, V.R.3
Lu, X.4
Sobsey, M.D.5
Erdman, D.D.6
-
15
-
-
0035141369
-
Influence of preassay and sequence variations on viral load determination by a multiplex real-time reverse transcriptase-polymerase chain reaction for feline immunodeficiency virus
-
Klein D., Leutenegger C.M., Bahula C., Gold P., Hofmann-Lehmann R., Salmons B., Lutz H., and Gunzburg W.H. Influence of preassay and sequence variations on viral load determination by a multiplex real-time reverse transcriptase-polymerase chain reaction for feline immunodeficiency virus. J. Acq. Immun. Def. Synd. 26 (2001) 8-20
-
(2001)
J. Acq. Immun. Def. Synd.
, vol.26
, pp. 8-20
-
-
Klein, D.1
Leutenegger, C.M.2
Bahula, C.3
Gold, P.4
Hofmann-Lehmann, R.5
Salmons, B.6
Lutz, H.7
Gunzburg, W.H.8
-
16
-
-
20444450075
-
Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR
-
Ko G., Jothikumar N., Hill V.R., and Sobsey M.D. Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR. J. Virol. Methods 127 2 (2005) 148-153
-
(2005)
J. Virol. Methods
, vol.127
, Issue.2
, pp. 148-153
-
-
Ko, G.1
Jothikumar, N.2
Hill, V.R.3
Sobsey, M.D.4
-
17
-
-
22944492842
-
-
Cloete T.E., Rose J.B., Nel L.H., and Ford T. (Eds), IWA Publishing, London
-
Leclerck H., Schwartzbrod L., and Dei-Cas E. In: Cloete T.E., Rose J.B., Nel L.H., and Ford T. (Eds). Microbial Waterborne Pathogens (2004), IWA Publishing, London 1-54
-
(2004)
Microbial Waterborne Pathogens
, pp. 1-54
-
-
Leclerck, H.1
Schwartzbrod, L.2
Dei-Cas, E.3
-
18
-
-
0345791421
-
Real-time blood plasma polymerase chain reaction for management of disseminated adenovirus infection
-
Leruez-Ville M., Minard V., Lacaille F., Buzyn A., Abachin E., Blanche S., Freymuth F., and Rouzioux C. Real-time blood plasma polymerase chain reaction for management of disseminated adenovirus infection. Clin. Infect. Dis. 38 1 (2004) 45-52
-
(2004)
Clin. Infect. Dis.
, vol.38
, Issue.1
, pp. 45-52
-
-
Leruez-Ville, M.1
Minard, V.2
Lacaille, F.3
Buzyn, A.4
Abachin, E.5
Blanche, S.6
Freymuth, F.7
Rouzioux, C.8
-
19
-
-
0032979158
-
Rapid feline immunodeficiency virus provirus quantitation by polymerase chain reaction using the TaqMan (R) fluorogenic real-time detection system
-
Leutenegger C.M., Klein D., Hofmann-Lehmann R., Mislin C., Hummel U., Boni J., Boretti F., Guenzburg W.H., and Lutz H. Rapid feline immunodeficiency virus provirus quantitation by polymerase chain reaction using the TaqMan (R) fluorogenic real-time detection system. J. Virol. Methods 78 1-2 (1999) 105-116
-
(1999)
J. Virol. Methods
, vol.78
, Issue.1-2
, pp. 105-116
-
-
Leutenegger, C.M.1
Klein, D.2
Hofmann-Lehmann, R.3
Mislin, C.4
Hummel, U.5
Boni, J.6
Boretti, F.7
Guenzburg, W.H.8
Lutz, H.9
-
20
-
-
0035835505
-
Real-time TaqMan PCR as a specific and more sensitive alternative to the branched-chain DNA assay for quantitation of simian immunodeficiency virus RNA
-
Leutenegger C.M., Higgins J., Matthews T.B., Tarantal A.F., Luciw P.A., Pedersen N.C., and North T.W. Real-time TaqMan PCR as a specific and more sensitive alternative to the branched-chain DNA assay for quantitation of simian immunodeficiency virus RNA. Aids Res. Hum. Retroviruses 17 3 (2001) 243-251
-
(2001)
Aids Res. Hum. Retroviruses
, vol.17
, Issue.3
, pp. 243-251
-
-
Leutenegger, C.M.1
Higgins, J.2
Matthews, T.B.3
Tarantal, A.F.4
Luciw, P.A.5
Pedersen, N.C.6
North, T.W.7
-
21
-
-
0037096123
-
PCR detection of specific pathogens in water: a risk-based analysis
-
Loge F.N., Thompson D.E., and Call D.R. PCR detection of specific pathogens in water: a risk-based analysis. Environ. Sci. Technol. 36 12 (2002) 2754-2759
-
(2002)
Environ. Sci. Technol.
, vol.36
, Issue.12
, pp. 2754-2759
-
-
Loge, F.N.1
Thompson, D.E.2
Call, D.R.3
-
23
-
-
0033991805
-
Listeria innocua and Salmonella panama in estuarine water and seawater: a comparative study
-
Monfort P., Piclet G., and Plusquellec A. Listeria innocua and Salmonella panama in estuarine water and seawater: a comparative study. Water Res. 34 3 (2000) 983-989
-
(2000)
Water Res.
, vol.34
, Issue.3
, pp. 983-989
-
-
Monfort, P.1
Piclet, G.2
Plusquellec, A.3
-
24
-
-
0033947888
-
Quantification of enterovirus RNA in sludge samples using single tube real-time RT-PCR
-
Monpoeho S., Dehee A., Mignotte B., Schwartzbrod L., Marechal V., Nicolas J.C., Billaudel S., and Ferre V. Quantification of enterovirus RNA in sludge samples using single tube real-time RT-PCR. Biotechniques 29 1 (2000) 88-93
-
(2000)
Biotechniques
, vol.29
, Issue.1
, pp. 88-93
-
-
Monpoeho, S.1
Dehee, A.2
Mignotte, B.3
Schwartzbrod, L.4
Marechal, V.5
Nicolas, J.C.6
Billaudel, S.7
Ferre, V.8
-
25
-
-
2942610631
-
Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study
-
Noble R.T., Allen S.M., Blackwood A.D., Chu W., Jiang S.C., Lovelace G.L., Sobsey M.D., Stewart J.R., and Wait D.A. Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study. J. Water Health 1 4 (2003) 195-207
-
(2003)
J. Water Health
, vol.1
, Issue.4
, pp. 195-207
-
-
Noble, R.T.1
Allen, S.M.2
Blackwood, A.D.3
Chu, W.4
Jiang, S.C.5
Lovelace, G.L.6
Sobsey, M.D.7
Stewart, J.R.8
Wait, D.A.9
-
26
-
-
27744607125
-
Quantitative detection of enteroviruses in activated sludge by cell culture and real-time RT-PCR using paramagnetic capturing
-
Pusch D., Ihle S., Lebuhn M., Graeber I., and López-Pila J.M. Quantitative detection of enteroviruses in activated sludge by cell culture and real-time RT-PCR using paramagnetic capturing. J. Water Health 3 3 (2005) 313-324
-
(2005)
J. Water Health
, vol.3
, Issue.3
, pp. 313-324
-
-
Pusch, D.1
Ihle, S.2
Lebuhn, M.3
Graeber, I.4
López-Pila, J.M.5
-
27
-
-
33847715501
-
Validation of hollow fiber ultrafiltration and real time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples
-
Rajal V.B., McSwain B.S., Thompson D.E., Leutenegger C.M., Kildare B.J., and Wuertz S. Validation of hollow fiber ultrafiltration and real time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples. Water Res. 41 (2007) 1411-1422
-
(2007)
Water Res.
, vol.41
, pp. 1411-1422
-
-
Rajal, V.B.1
McSwain, B.S.2
Thompson, D.E.3
Leutenegger, C.M.4
Kildare, B.J.5
Wuertz, S.6
-
29
-
-
2342640899
-
Determination of detection and quantification limits for SNP allele frequency estimation in DNA pools using real time PCR
-
Schwarz G., Baumler S., Block A., Felsenstein F.G., and Wenzel G. Determination of detection and quantification limits for SNP allele frequency estimation in DNA pools using real time PCR. Nucleic Acids Res. 32 3 (2004)
-
(2004)
Nucleic Acids Res.
, vol.32
, Issue.3
-
-
Schwarz, G.1
Baumler, S.2
Block, A.3
Felsenstein, F.G.4
Wenzel, G.5
-
30
-
-
12744260019
-
Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
-
Seurinck S., Defoirdt T., Verstraete W., and Siciliano S.D. Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater. Environ. Microbiol. 7 2 (2005) 249-259
-
(2005)
Environ. Microbiol.
, vol.7
, Issue.2
, pp. 249-259
-
-
Seurinck, S.1
Defoirdt, T.2
Verstraete, W.3
Siciliano, S.D.4
-
31
-
-
0033986005
-
Sources of Escherichia coli in a coastal subtropical environment
-
Solo-Gabriele H.M., Wolfert M.A., Desmarais T.R., and Palmer C.J. Sources of Escherichia coli in a coastal subtropical environment. Appl. Environ. Microbiol. 66 1 (2000) 230-237
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, Issue.1
, pp. 230-237
-
-
Solo-Gabriele, H.M.1
Wolfert, M.A.2
Desmarais, T.R.3
Palmer, C.J.4
-
32
-
-
0035379677
-
Application of the 5′ fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments
-
Stults J.R., Snoeyenbos-West O., Methe B., Lovley D.R., and Chandler D.P. Application of the 5′ fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments. Appl. Environ. Microbiol. 67 6 (2001) 2781-2789
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, Issue.6
, pp. 2781-2789
-
-
Stults, J.R.1
Snoeyenbos-West, O.2
Methe, B.3
Lovley, D.R.4
Chandler, D.P.5
-
33
-
-
3042556185
-
Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza A and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4
-
Templeton K.E., Scheltinga S.A., Beersma M.F.C., Kroes A.C.M., and Claas E.C.J. Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza A and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4. J. Clin. Microbiol. 42 4 (2004) 1564-1569
-
(2004)
J. Clin. Microbiol.
, vol.42
, Issue.4
, pp. 1564-1569
-
-
Templeton, K.E.1
Scheltinga, S.A.2
Beersma, M.F.C.3
Kroes, A.C.M.4
Claas, E.C.J.5
-
34
-
-
0030748867
-
Inhibition and facilitation of nucleic acid amplification
-
Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63 10 (1997) 3741-3751
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, Issue.10
, pp. 3741-3751
-
-
Wilson, I.G.1
|