Micro-rheological behaviour and nonlinear rheology of networks assembled from polysaccharides from the plant cell wall

New Journal of Physics

Volumn 15, Issue , 2013, Pages

  Vincent, R R R ^a   Mansel, B W ^b,c   Kramer, A ^d   Kroy, K ^d   Williams, M A K ^b,c  

^a INSTITUTE FOR BIOENGINEERING OF CATALONIA IBEC   (Spain)

^b MASSEY UNIVERSITY   (New Zealand)

^c MACDIARMID INSTITUTE FOR ADVANCED MATERIALS AND NANOTECHNOLOGY   (New Zealand)

^d UNIVERSITY OF LEIPZIG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL COMPLEXITY; CELL WALL POLYSACCHARIDES; CYTOSKELETAL NETWORK; LOW-FREQUENCY MOTION; MECHANICAL REQUIREMENTS; NONLINEAR MECHANICAL RESPONSE; STRUCTURE FUNCTIONS; TEMPERATURE CHANGES;

PLANT CELL CULTURE; POLYMERS; POLYSACCHARIDES; PROTEINS; RHEOLOGY; WALL FUNCTION;

COMPLEX NETWORKS;

EID: 84875475518     PISSN: 13672630     EISSN: None     Source Type: Journal    
DOI: 10.1088/1367-2630/15/3/035002     Document Type: Article

References (66)

1. Bausch A R and Kroy K 2006 A bottom-up approach to cell mechanics Nature Phys. 2 231-4 (Pubitemid 43553642)
2. Storm C, Pastore J J, MacKintosh F C, Lubensky T C and Janmey P A 2005 Nonlinear elasticity in biological gels Nature 435 191-4 (Pubitemid 40685941)
3. Apgar J, Tseng Y, Fedorov E, Herwig M B, Almo S C and Wirtz D 2000 Multiple-particle tracking measurements of heterogeneities in solutions of actin filaments and actin bundles Biophys. J. 79 1095-106 (Pubitemid 30626200)
4. Gardel M L, Shin J H, MacKintosh F C, Mahadevan L, Matsudaira P and Weitz D A 2004 Elastic behavior of cross-linked and bundled actin networks Science 304 1301-5 (Pubitemid 38697422)
5. Palmer A, Xu J Y, Kuo S C and Wirtz D 1999 Diffusing wave spectroscopy microrheology of actin filament networks 1999 Biophys. J. 76 1063-71 (Pubitemid 29264587)
6. Mason T G, Gisler T, Kroy K, Frey E and Weitz D A 2000 Rheology of F-actin solutions determined from thermally driven tracer motion J. Rheol. 44 917-28
7. Mackintosh F C, Kas J and Janmey P A 1995 Elasticity of semi-flexible biopolymer networks Phys. Rev. Lett. 75 4425-8
8. Mason T G, Dhople A and Wirtz D 1997 Statistical Mechanics in Physics and Biology ed D Wirtz and T C Halsey (Pittsburgh, PA: MRS) pp 153-8
9. Willenbacher N, Oelschlaeger C, Schopferer M, Fischer P, Cardinaux F and Scheffold F 2007 Broad bandwidth optical and mechanical rheometry of wormlike micelle solutions Phys. Rev. Lett. 99 068302 (Pubitemid 47263131)
10. Vincent R R, Pinder D N, Hemar Y and Williams M A K 2007 Microrheological studies reveal semiflexible networks in gels of a ubiquitous cell wall polysaccharide Phys. Rev. E 76 031909 (Pubitemid 47443122)
11. Doi M and Edwards S F 1988 The Theory of Polymer Dynamics (Oxford: Clarendon)
12. Kroy K and Glaser J 2007 The glassy wormlike chain New J. Phys. 9 416-27 (Pubitemid 350241885)
13. Sollich P, Lequeux F, Hebraud P and Cates M E 1997 Rheology of soft glassy materials Phys. Rev. Lett. 78 2020-3 (Pubitemid 127647417)
14. Sollich P and Cates M E 2012 Thermodynamic interpretation of soft glassy rheology models Phys. Rev. E 85 031127
15. Glaser J, Hallatschek O and Kroy K 2008 Dynamic structure factor of a stiff polymer in a glassy solution Eur. Phys. J. E 26 123-36
16. Kroy K 2008 Dynamics of wormlike and glassy wormlike chains Soft Matter 4 2323-30
17. Semmrich C, Storz T, Glaser J, Merkel R, Bausch A R and Kroy K 2007 Glass transition and rheological redundancy in F-actin solutions Proc. Natl Acad. Sci. USA 104 20199-203
18. Wolff L, Fernandez P and Kroy K 2010 Inelastic mechanics of sticky biopolymer networks New J. Phys. 12 053024
19. Willats W G T, Knox P and Mikkelsen J D 2006 Pectin: new insights into an old polymer are starting to gel Trends Food Sci. Technol. 17 97-104 (Pubitemid 43243642)
20. Peaucelle A, Braybrook S and Hofte H 2012 Cell wall mechanics and growth control in plants: the role of pectins revisited Front. Plant Sci. 3 121
21. Vincken J P, Schols H A, Oomen R, McCann M C, Ulvskov P, Voragen A G J and Visser R G F 2003 If homogalacturonan were a side chain of rhamnogalacturonan: I. Implications for cell wall architecture Plant Physiol. 132 1781-9 (Pubitemid 37024141)
22. Gidley M J, Morris E R, Murray E J, Powell D A and Rees D A 1980 Evidence for 2 mechanisms of interchain association in calcium pectate gels Int. J. Biol. Macromol. 2 332-4
23. Morris E R, Gidley M J, Murray E J, Powell D A and Rees D A 1980 Characterization of pectin gelation under conditions of low water activity by circular dichroism, competitive inhibition and mechanical properties Int. J. Biol. Macromol. 2 327-30
24. Morris E R, Powell D A, Gidley M J and Rees D A 1982 Conformations and interactions of pectins: 1. Polymorphism between gel and solid states of calcium polygalacturonate J. Mol. Biol. 155 507-16
25. Powell D A, Morris E R, Gidley M J and Rees D A 1982 Conformations and interactions of pectins: 2. Influence of residue sequence on chain association in calcium pectate gels J. Mol. Biol. 155 517-31
26. Parre E and Geitmann A 2005 Pectin and the role of the physical properties of the cell wall in pollen tube growth of Solanum chacoense Planta 220 582-92 (Pubitemid 40306962)
27. Vincent R, Cucheval A, Hemar Y and Williams M 2009 Bio-inspired network optimization in soft materials - insights from the plant cell wall Eur. Phys. J. E 28 79-87
28. Vincent R R and Williams M A K 2009 Microrheological investigations give insights into the microstructure and functionality of pectin gels Carbohydrate Res. 344 1863-71
29. O'Brien A B, Philp K and Morris E R 2009 Gelation of high-methoxy pectin by enzymic de-esterification in the presence of calcium ions: a preliminary evaluation Carbohydrate Res. 344 1818-23
30. Slavov A, Garnier C, Crepeau M J, Durand S, Thibault J F and Bonnin E 2009 Gelation of high methoxy pectin in the presence of pectin methylesterases and calcium Carbohydrate Polym. 77 876-84
31. Gilsenan P M, Richardson R K and Morris E R 2000 Thermally reversible acid-induced gelation of low-methoxy pectin Carbohydrate Polym. 41 339-49 (Pubitemid 30529944)
32. Strom A, Ribelles P, Lundin L, Norton I, Morris E R and Williams M A K 2007 Influence of pectin fine structure on the mechanical properties of calcium-pectin and acid-pectin gels Biomacromolecules 8 2668-74 (Pubitemid 47516914)
33. Ravanat G and Rinaudo M 1980 Investigation on oligogalacturonic and polygalacturonic acids by potentiometry and circular-dichroism Biopolymers 19 2209-22
34. Cesaro A, Ciana A, Delben F, Manzini G and Paoletti S 1982 Physiochemical properties of pectic acid: 1. Thermodynamic evidence of a pH-induced conformational transistion in aqueos solution Biopolymers 21 431-49
35. Jarvis M C and Apperley D C 1995 Chain conformation in concentrated pectic gels - evidence form C-13 NMR Carbohydrate Res. 275 131-45
36. Walkinshaw M D and Arnott S 1981 Conformations and interactions of pectins: 1. X-ray diffraction of sodium pectate in neutral and acidified forms J. Mol. Biol. 153 1055-73
37. Walkinshaw M D and Arnott S 1981 Conformations and interactions of pectins: 2. Models for junction zones in pectinic acid and calcium pectate gels J. Mol. Biol. 153 1075-85
38. Gittes F and MacKintosh F C 1998 Dynamic shear modulus of a semiflexible polymer network Phys. Rev. E 58 1241-44
39. Williams M A K, Foster T J and Schols H A 2003 Elucidation of pectin methylester distributions by capillary electrophoresis J. Agric. Food Chem. 51 1777-81
40. Williams M A K, Cucheval A, Ström A and Ralet M C 2009 Electrophoretic behavior of copolymeric galacturonans including comments on the information content of the intermolecular charge distribution Biomacromolecules 10 1523-31
41. Goubet F, Ström A, Dupree P and Williams M A K 2005 An investigation of pectin methylesterification patterns by two independent methods: capillary electrophoresis and polysaccharide analysis using carbohydrate gel electrophoresis Carbohydrate Res. 340 1193-9 (Pubitemid 40431798)
42. Ström A and Williams M A K 2004 On the separation, detection and quantification of pectin derived oligosaccharides by capillary electrophoresis Carbohydrate Res. 339 1711-6 (Pubitemid 38829498)
43. Hunt J J, Cameron R and Williams M A K 2006 On the simulation of enzymatic digest patterns: the fragmentation of oligomeric and polymeric galacturonides by endo-polygalacturonase II Biochim. Biophys. Acta 1760 1696-703 (Pubitemid 44667265)
44. Edwards P J B, Kakubayashi M, Dykstra R, Pascal S M and Williams M A K 2010 Rheo-NMR studies of an enzymatic reaction: evidence of a shear-stable macromolecular system Biophys. J. 98 1986-94
45. Waigh T A 2005 Microrheology of complex fluids Rep. Prog. Phys. 68 685-742 (Pubitemid 40405950)
46. Gittes F, Schnurr B, Olmsted P D, MacKintosh F C and Schmidt C F 1997 Microscopic viscoelasticity: shear moduli of soft materials determined from thermal fluctuations Phys. Rev. Lett. 79 3286-9 (Pubitemid 127624769)
47. Mason T G, Ganesan K, van Zanten J H, Wirtz D and Kuo S C 1997 Particle tracking microrheology of complex fluids Phys. Rev. Lett. 79 3282-5 (Pubitemid 127624768)
48. Hemar Y and Pinder D N 2006 DWS microrheology of a linear polysaccharide Biomacromolecules 7 674-6
49. Weitz D A and Pine D J 1993 Dynamic Light Scattering: The Method and Some Applications ed W Brown (Oxford: Oxford University Press) pp 652-720
50. Fernandez P, Pullarkat P A and Ott A 2006 A master relation defines the nonlinear viscoelasticity of single fibroblasts Biophys. J. 90 3796-805
51. Götze W 2012 Complex Dynamics of Glass-Forming Liquids: A Mode-Coupling Theory (International Series of Monographs on Physics) (New York, NY: Oxford University Press)
52. Koenderink G H, Atakhorrami M, MacKintosh F C and Schmidt C F 2006 High-frequency stress relaxation in semiflexible polymer solutions and networks Phys. Rev. Lett. 96 138307
53. Morse D C 1998 Viscoelasticity of tightly entangled solutions of semiflexible polymers Phys. Rev. E 58 R1237-40
54. Schuster E, Cucheval A, Lundin L and Williams M A K 2011 Using SAXS to reveal the degree of bundling in the polysaccharide junction zones of microrheologically distinct pectin gels Biomacromolecules 12 2583-90
55. Kollmannsberger P and Fabry B 2011 Annual Review of Materials Research vol 41 ed D R Clarke and P Fratzl (Palo Alto, CA: Annual Reviews) pp 75-97
56. Wong I Y, Gardel M L, Reichman D R, Weeks E R, Valentine M T, Bausch A R and Weitz D A 2004 Anomalous diffusion probes microstructure dynamics of entangled F-actin networks Phys. Rev. Lett. 92 178101
57. Piculell L, Borgström J, Chronakis I S, Quist P-O and Viebke C 1997 Organisation and association of κ-carrageenan helices under different salt conditions Int. J. Biol. Macromol. 21 141-53 (Pubitemid 27368032)
58. Mohammed Z H, Hember M W N, Richardson R K and Morris E R 1998 Kinetic and equilibrium processes in the formation and melting of agarose gels Carbohydrate Polym. 36 15-26 (Pubitemid 128431736)
59. Schopferer M, Bar H, Hochstein B, Sharma S, Mucke N, Herrmann H and Willenbacher N 2009 Desmin and vimentin intermediate filament networks: their viscoelastic properties investigated by mechanical rheometry J. Mol. Biol. 388 133-43
60. Lin Y C, Yao N Y, Broedersz C P, Herrmann H, MacKintosh F C and Weitz D A 2010 Origins of elasticity in intermediate filament networks Phys. Rev. Lett. 104 058101
61. Lin Y C, Koenderink G H, MacKintosh F C and Weitz D A 2011 Control of nonlinear elasticity in F-actin networks with microtubules Soft Matter 7 902-6
62. Kurniawan N A, Wong L H and Rajagopalan R 2012 Early stiffening and softening of collagen: interplay of deformation mechanisms in biopolymer networks Biomacromolecules 13 691-8
63. Kurniawan N A, Enemark S and Rajagopalan R 2012 The role of structure in the nonlinear mechanics of cross-linked semiflexible polymer networks J. Chem. Phys. 136 065101
64. Rico F, Chu C, Abdulreda M H, Qin Y and Moy V T 2010 Temperature modulation of integrin-mediated cell adhesion Biophys. J. 99 1387-96
65. Isambert H and Maggs A C 1996 Dynamics and rheology of actin solutions Macromolecules 29 1036-40 (Pubitemid 126531454)
66. Hinner B, Tempel M, Sackmann E, Kroy K and Frey E 1998 Entanglement, elasticity and viscous relaxation of actin solutions Phys. Rev. Lett. 81 2614-17 (Pubitemid 128790450)