-
1
-
-
78650433004
-
Polyadenylation and beyond: emerging roles for noncanonical poly(A) polymerases
-
Schmidt M.J., Norbury C.J. Polyadenylation and beyond: emerging roles for noncanonical poly(A) polymerases. Wiley Interdiscip. Rev. RNA 2010, 1:142-151.
-
(2010)
Wiley Interdiscip. Rev. RNA
, vol.1
, pp. 142-151
-
-
Schmidt, M.J.1
Norbury, C.J.2
-
2
-
-
35548959608
-
RNA-specific ribonucleotidyl transferases
-
Martin G., Keller W. RNA-specific ribonucleotidyl transferases. RNA 2007, 13:1834-1849.
-
(2007)
RNA
, vol.13
, pp. 1834-1849
-
-
Martin, G.1
Keller, W.2
-
3
-
-
20444368818
-
RNA degradation by the exosome is promoted by a nuclear polyadenylation complex
-
LaCava J., Houseley J., Saveanu C., Petfalski E., Thompson E., Jacquier A., Tollervey D. RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 2005, 121:713-724.
-
(2005)
Cell
, vol.121
, pp. 713-724
-
-
LaCava, J.1
Houseley, J.2
Saveanu, C.3
Petfalski, E.4
Thompson, E.5
Jacquier, A.6
Tollervey, D.7
-
4
-
-
33645739358
-
Yeast Trf5p is a nuclear poly(A) polymerase
-
Houseley J., Tollervey D. Yeast Trf5p is a nuclear poly(A) polymerase. EMBO Rep. 2006, 7:205-211.
-
(2006)
EMBO Rep.
, vol.7
, pp. 205-211
-
-
Houseley, J.1
Tollervey, D.2
-
5
-
-
33748424364
-
Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3
-
Arigo J.T., Eyler D.E., Carroll K.L., Corden J.L. Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3. Mol. Cell 2006, 23:841-851.
-
(2006)
Mol. Cell
, vol.23
, pp. 841-851
-
-
Arigo, J.T.1
Eyler, D.E.2
Carroll, K.L.3
Corden, J.L.4
-
6
-
-
33748435751
-
Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance
-
Thiebaut M., Kisseleva-Romanova E., Rougemaille M., Boulay J., Libri D. Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance. Mol. Cell 2006, 23:853-864.
-
(2006)
Mol. Cell
, vol.23
, pp. 853-864
-
-
Thiebaut, M.1
Kisseleva-Romanova, E.2
Rougemaille, M.3
Boulay, J.4
Libri, D.5
-
7
-
-
20444368036
-
Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase
-
Wyers F., Rougemaille M., Badis G., Rousselle J.C., Dufour M.E., Boulay J., Regnault B., Devaux F., Namane A., Seraphin B., Libri D., Jacquier A. Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase. Cell 2005, 121:725-737.
-
(2005)
Cell
, vol.121
, pp. 725-737
-
-
Wyers, F.1
Rougemaille, M.2
Badis, G.3
Rousselle, J.C.4
Dufour, M.E.5
Boulay, J.6
Regnault, B.7
Devaux, F.8
Namane, A.9
Seraphin, B.10
Libri, D.11
Jacquier, A.12
-
8
-
-
33644784770
-
Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae
-
Davis C.A., Ares M. Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 2006, 103:3262-3267.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 3262-3267
-
-
Davis, C.A.1
Ares, M.2
-
9
-
-
33645727798
-
Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae
-
Dez C., Houseley J., Tollervey D. Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae. EMBO J. 2006, 25:1534-1546.
-
(2006)
EMBO J.
, vol.25
, pp. 1534-1546
-
-
Dez, C.1
Houseley, J.2
Tollervey, D.3
-
10
-
-
29844458585
-
Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome
-
Egecioglu D.E., Henras A.K., Chanfreau G.F. Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome. RNA 2006, 12:26-32.
-
(2006)
RNA
, vol.12
, pp. 26-32
-
-
Egecioglu, D.E.1
Henras, A.K.2
Chanfreau, G.F.3
-
11
-
-
34347332400
-
Depletion of the yeast nuclear exosome subunit Rrp6 results in accumulation of polyadenylated RNAs in a discrete domain within the nucleolus
-
Carneiro T., Carvalho C., Braga J., Rino J., Milligan L., Tollervey D., Carmo-Fonseca M. Depletion of the yeast nuclear exosome subunit Rrp6 results in accumulation of polyadenylated RNAs in a discrete domain within the nucleolus. Mol. Cell Biol. 2007, 27:4157-4165.
-
(2007)
Mol. Cell Biol.
, vol.27
, pp. 4157-4165
-
-
Carneiro, T.1
Carvalho, C.2
Braga, J.3
Rino, J.4
Milligan, L.5
Tollervey, D.6
Carmo-Fonseca, M.7
-
12
-
-
37149034478
-
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
-
Houseley J., Kotovic K., El Hage A., Tollervey D. Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control. EMBO J. 2007, 26:4996-5006.
-
(2007)
EMBO J.
, vol.26
, pp. 4996-5006
-
-
Houseley, J.1
Kotovic, K.2
El Hage, A.3
Tollervey, D.4
-
13
-
-
68249083958
-
Distinct roles of non-canonical poly(A) polymerases in RNA metabolism
-
San Paolo S., Vanacova S., Schenk L., Scherrer T., Blank D., Keller W., Gerber A.P. Distinct roles of non-canonical poly(A) polymerases in RNA metabolism. PLoS Genet. 2009, 5:e1000555.
-
(2009)
PLoS Genet.
, vol.5
-
-
San Paolo, S.1
Vanacova, S.2
Schenk, L.3
Scherrer, T.4
Blank, D.5
Keller, W.6
Gerber, A.P.7
-
14
-
-
77950509943
-
TRAMP complex enhances RNA degradation by the nuclear exosome component Rrp6
-
Callahan K.P., Butler J.S. TRAMP complex enhances RNA degradation by the nuclear exosome component Rrp6. J. Biol. Chem. 2010, 285:3540-3547.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 3540-3547
-
-
Callahan, K.P.1
Butler, J.S.2
-
15
-
-
2642574393
-
Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
-
Kadaba S., Krueger A., Trice T., Krecic A.M., Hinnebusch A.G., Anderson J. Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae. Genes Dev. 2004, 18:1227-1240.
-
(2004)
Genes Dev.
, vol.18
, pp. 1227-1240
-
-
Kadaba, S.1
Krueger, A.2
Trice, T.3
Krecic, A.M.4
Hinnebusch, A.G.5
Anderson, J.6
-
16
-
-
22744459614
-
A new yeast poly(A) polymerase complex involved in RNA quality control
-
Vanacova S., Wolf J., Martin G., Blank D., Dettwiler S., Friedlein A., Langen H., Keith G., Keller W. A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol. 2005, 3:e189.
-
(2005)
PLoS Biol.
, vol.3
-
-
Vanacova, S.1
Wolf, J.2
Martin, G.3
Blank, D.4
Dettwiler, S.5
Friedlein, A.6
Langen, H.7
Keith, G.8
Keller, W.9
-
17
-
-
0033548444
-
The topoisomerase-related function gene TRF4 affects cellular sensitivity to the
-
Walowsky C., Fitzhugh D.J., Castano I.B., Ju J.Y., Levin N.A., Christman M.F. The topoisomerase-related function gene TRF4 affects cellular sensitivity to the. J. Biol. Chem. 1999, 274:7302-7308.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 7302-7308
-
-
Walowsky, C.1
Fitzhugh, D.J.2
Castano, I.B.3
Ju, J.Y.4
Levin, N.A.5
Christman, M.F.6
-
18
-
-
75949116417
-
Polyadenylation and degradation of incomplete RNA polymerase I transcripts in mammalian cells
-
Shcherbik N., Wang M., Lapik Y.R., Srivastava L., Pestov D.G. Polyadenylation and degradation of incomplete RNA polymerase I transcripts in mammalian cells. EMBO Rep. 2010, 11:106-111.
-
(2010)
EMBO Rep.
, vol.11
, pp. 106-111
-
-
Shcherbik, N.1
Wang, M.2
Lapik, Y.R.3
Srivastava, L.4
Pestov, D.G.5
-
19
-
-
38149023239
-
Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5'-3' and 3'-5'
-
Mullen T.E., Marzluff W.F. Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5'-3' and 3'-5'. Genes Dev. 2008, 22:50-65.
-
(2008)
Genes Dev.
, vol.22
, pp. 50-65
-
-
Mullen, T.E.1
Marzluff, W.F.2
-
20
-
-
84859995666
-
Maturation of mammalian H/ACA box snoRNAs: PAPD5-dependent adenylation and PARN-dependent trimming
-
Berndt H., Harnisch C., Rammelt C., Stohr N., Zirkel A., Dohm J.C., Himmelbauer H., Tavanez J.P., Huttelmaier S., Wahle E. Maturation of mammalian H/ACA box snoRNAs: PAPD5-dependent adenylation and PARN-dependent trimming. RNA 2012, 18:958-972.
-
(2012)
RNA
, vol.18
, pp. 958-972
-
-
Berndt, H.1
Harnisch, C.2
Rammelt, C.3
Stohr, N.4
Zirkel, A.5
Dohm, J.C.6
Himmelbauer, H.7
Tavanez, J.P.8
Huttelmaier, S.9
Wahle, E.10
-
21
-
-
80051730960
-
Interaction profiling identifies the human nuclear exosome targeting complex
-
Lubas M., Christensen M.S., Kristiansen M.S., Domanski M., Falkenby L.G., Lykke-Andersen S., Andersen J.S., Dziembowski A., Jensen T.H. Interaction profiling identifies the human nuclear exosome targeting complex. Mol. Cell 2011, 43:624-637.
-
(2011)
Mol. Cell
, vol.43
, pp. 624-637
-
-
Lubas, M.1
Christensen, M.S.2
Kristiansen, M.S.3
Domanski, M.4
Falkenby, L.G.5
Lykke-Andersen, S.6
Andersen, J.S.7
Dziembowski, A.8
Jensen, T.H.9
-
22
-
-
80054811443
-
Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex
-
Fasken M.B., Leung S.W., Banerjee A., Kodani M.O., Chavez R., Bowman E.A., Purohit M.K., Rubinson M.E., Rubinson E.H., Corbett A.H. Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex. J. Biol. Chem. 2011, 286:37429-37445.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 37429-37445
-
-
Fasken, M.B.1
Leung, S.W.2
Banerjee, A.3
Kodani, M.O.4
Chavez, R.5
Bowman, E.A.6
Purohit, M.K.7
Rubinson, M.E.8
Rubinson, E.H.9
Corbett, A.H.10
-
23
-
-
84860390193
-
PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif
-
Rammelt C., Bilen B., Zavolan M., Keller W. PAPD5, a noncanonical poly(A) polymerase with an unusual RNA-binding motif. RNA 2011, 17:1737-1746.
-
(2011)
RNA
, vol.17
, pp. 1737-1746
-
-
Rammelt, C.1
Bilen, B.2
Zavolan, M.3
Keller, W.4
-
24
-
-
79953803635
-
Anti-proliferative protein Tob negatively regulates CPEB3 target by recruiting Caf1 deadenylase
-
Hosoda N., Funakoshi Y., Hirasawa M., Yamagishi R., Asano Y., Miyagawa R., Ogami K., Tsujimoto M., Hoshino S. Anti-proliferative protein Tob negatively regulates CPEB3 target by recruiting Caf1 deadenylase. EMBO J. 2011, 30:1311-1323.
-
(2011)
EMBO J.
, vol.30
, pp. 1311-1323
-
-
Hosoda, N.1
Funakoshi, Y.2
Hirasawa, M.3
Yamagishi, R.4
Asano, Y.5
Miyagawa, R.6
Ogami, K.7
Tsujimoto, M.8
Hoshino, S.9
-
25
-
-
36849079370
-
Mechanism of mRNA deadenylation: evidence for a molecular interplay between translation termination factor eRF3 and mRNA deadenylases
-
Funakoshi Y., Doi Y., Hosoda N., Uchida N., Osawa M., Shimada I., Tsujimoto M., Suzuki T., Katada T., Hoshino S. Mechanism of mRNA deadenylation: evidence for a molecular interplay between translation termination factor eRF3 and mRNA deadenylases. Genes Dev. 2007, 21:3135-3148.
-
(2007)
Genes Dev.
, vol.21
, pp. 3135-3148
-
-
Funakoshi, Y.1
Doi, Y.2
Hosoda, N.3
Uchida, N.4
Osawa, M.5
Shimada, I.6
Tsujimoto, M.7
Suzuki, T.8
Katada, T.9
Hoshino, S.10
-
26
-
-
84860727083
-
Tri-snRNP-associated proteins interact with subunits of the TRAMP and nuclear
-
Nag A., Steitz J.A. Tri-snRNP-associated proteins interact with subunits of the TRAMP and nuclear. RNA Biol. 2012, 9:334-342.
-
(2012)
RNA Biol.
, vol.9
, pp. 334-342
-
-
Nag, A.1
Steitz, J.A.2
-
27
-
-
0036500141
-
Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis
-
Makarova O.V., Makarov E.M., Liu S., Vornlocher H.P., Luhrmann R. Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis. EMBO J. 2002, 21:1148-1157.
-
(2002)
EMBO J.
, vol.21
, pp. 1148-1157
-
-
Makarova, O.V.1
Makarov, E.M.2
Liu, S.3
Vornlocher, H.P.4
Luhrmann, R.5
-
28
-
-
66449135943
-
Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex
-
Roth K.M., Byam J., Fang F., Butler J.S. Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex. RNA 2009, 15:1045-1058.
-
(2009)
RNA
, vol.15
, pp. 1045-1058
-
-
Roth, K.M.1
Byam, J.2
Fang, F.3
Butler, J.S.4
-
29
-
-
44349084822
-
The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3' processing pathway
-
Ciais D., Bohnsack M.T., Tollervey D. The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3' processing pathway. Nucleic Acids Res. 2008, 36:3075-3084.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 3075-3084
-
-
Ciais, D.1
Bohnsack, M.T.2
Tollervey, D.3
|