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Volumn 121, Issue 5, 2005, Pages 713-724

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

Author keywords

[No Author keywords available]

Indexed keywords

3',5' EXONUCLEASE; EXONUCLEASE; MESSENGER RNA; POLYADENYLIC ACID POLYMERASE TRF4P; POLYNUCLEOTIDE ADENYLYLTRANSFERASE; RIBONUCLEIC ACID HELICASE MTR4P; RIBOSOME RNA; RNA BINDING PROTEIN; RNA HELICASE; SMALL NUCLEOLAR RNA; UNCLASSIFIED DRUG; ZINC KNUCKLE PROTEIN AIR2P;

EID: 20444368818     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cell.2005.04.029     Document Type: Article
Times cited : (727)

References (41)
  • 4
    • 0033119535 scopus 로고    scopus 로고
    • DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history
    • L. Aravind, and E.V. Koonin DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history Nucleic Acids Res. 27 1999 1609 1618
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1609-1618
    • Aravind, L.1    Koonin, E.V.2
  • 5
    • 0023788651 scopus 로고
    • Identification and characterization of a yeast nucleolar protein that is similar to a rat liver nucleolar protein
    • P. Aris, and G. Blobel Identification and characterization of a yeast nucleolar protein that is similar to a rat liver nucleolar protein J. Cell Biol. 107 1988 17 31
    • (1988) J. Cell Biol. , vol.107 , pp. 17-31
    • Aris, P.1    Blobel, G.2
  • 7
    • 0032557455 scopus 로고    scopus 로고
    • Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3′ end formation
    • M.W. Briggs, K.T. Burkard, and J.S. Butler Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3′ end formation J. Biol. Chem. 273 1998 13255 13263
    • (1998) J. Biol. Chem. , vol.273 , pp. 13255-13263
    • Briggs, M.W.1    Burkard, K.T.2    Butler, J.S.3
  • 8
    • 0031740339 scopus 로고    scopus 로고
    • Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation
    • C.E. Brown, and A.B. Sachs Poly(A) tail length control in Saccharomyces cerevisiae occurs by message-specific deadenylation Mol. Cell. Biol. 18 1998 6548 6559
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 6548-6559
    • Brown, C.E.1    Sachs, A.B.2
  • 9
    • 0029999538 scopus 로고    scopus 로고
    • Mitotic chromosome condensation in the rDNA requires TRF4 and DNA topoisomerase I in Saccharomyces cerevisiae
    • I.B. Castano, P.M. Brzoska, B.U. Sadoff, H. Chen, and M.F. Christman Mitotic chromosome condensation in the rDNA requires TRF4 and DNA topoisomerase I in Saccharomyces cerevisiae Genes Dev. 10 1996 2564 2576
    • (1996) Genes Dev. , vol.10 , pp. 2564-2576
    • Castano, I.B.1    Brzoska, P.M.2    Sadoff, B.U.3    Chen, H.4    Christman, M.F.5
  • 10
    • 0029897304 scopus 로고    scopus 로고
    • A novel family of TRF (DNA topoisomerase I-related function) genes required for proper nuclear segregation
    • I.B. Castano, S. Heath-Pagliuso, B.U. Sadoff, D.J. Fitzhugh, and M.F. Christman A novel family of TRF (DNA topoisomerase I-related function) genes required for proper nuclear segregation Nucleic Acids Res. 24 1996 2404 2410
    • (1996) Nucleic Acids Res. , vol.24 , pp. 2404-2410
    • Castano, I.B.1    Heath-Pagliuso, S.2    Sadoff, B.U.3    Fitzhugh, D.J.4    Christman, M.F.5
  • 11
    • 0032481316 scopus 로고    scopus 로고
    • Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3′ end formation of 5.8S rRNA in Saccharomyces cerevisiae
    • J. de la Cruz, D. Kressler, D. Tollervey, and P. Linder Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3′ end formation of 5.8S rRNA in Saccharomyces cerevisiae EMBO J. 17 1998 1128 1140
    • (1998) EMBO J. , vol.17 , pp. 1128-1140
    • De La Cruz, J.1    Kressler, D.2    Tollervey, D.3    Linder, P.4
  • 12
    • 0037184518 scopus 로고    scopus 로고
    • The poly(A) tail of mRNAs: bodyguard in eukaryotes, scavenger in bacteria
    • M. Dreyfus, and P. Regnier The poly(A) tail of mRNAs: bodyguard in eukaryotes, scavenger in bacteria Cell 111 2002 611 613
    • (2002) Cell , vol.111 , pp. 611-613
    • Dreyfus, M.1    Regnier, P.2
  • 14
    • 0030963019 scopus 로고    scopus 로고
    • Toward a functional analysis of the yeast genome through exhaustive two- hybrid screens
    • M. Fromont-Racine, J.C. Rain, and P. Legrain Toward a functional analysis of the yeast genome through exhaustive two- hybrid screens Nat. Genet. 16 1997 277 282
    • (1997) Nat. Genet. , vol.16 , pp. 277-282
    • Fromont-Racine, M.1    Rain, J.C.2    Legrain, P.3
  • 17
    • 0028954118 scopus 로고
    • Studies on the transformation of intact yeast cells by the LiAc/SS-DNA/PEG procedure
    • R.D. Gietz, R.H. Schiestl, A.R. Willems, and R.A. Woods Studies on the transformation of intact yeast cells by the LiAc/SS-DNA/PEG procedure Yeast 11 1995 355 360
    • (1995) Yeast , vol.11 , pp. 355-360
    • Gietz, R.D.1    Schiestl, R.H.2    Willems, A.R.3    Woods, R.A.4
  • 19
    • 0034693216 scopus 로고    scopus 로고
    • Novel RING finger proteins, Air1p and Air2p, interact with Hmt1p and inhibit the arginine methylation of Npl3p
    • K. Inoue, T. Mizuno, K. Wada, and M. Hagiwara Novel RING finger proteins, Air1p and Air2p, interact with Hmt1p and inhibit the arginine methylation of Npl3p J. Biol. Chem. 275 2000 32793 32799
    • (2000) J. Biol. Chem. , vol.275 , pp. 32793-32799
    • Inoue, K.1    Mizuno, T.2    Wada, K.3    Hagiwara, M.4
  • 20
    • 2642574393 scopus 로고    scopus 로고
    • Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae
    • S. Kadaba, A. Krueger, T. Trice, A.M. Krecic, A.G. Hinnebusch, and J. Anderson Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae Genes Dev. 18 2004 1227 1240
    • (2004) Genes Dev. , vol.18 , pp. 1227-1240
    • Kadaba, S.1    Krueger, A.2    Trice, T.3    Krecic, A.M.4    Hinnebusch, A.G.5    Anderson, J.6
  • 22
    • 0026016866 scopus 로고
    • Sequence changes in both flanking sequences of a pre-tRNA influence the cleavage specificity of RNase P
    • G. Krupp, D. Kahle, T. Vogt, and S. Char Sequence changes in both flanking sequences of a pre-tRNA influence the cleavage specificity of RNase P J. Mol. Biol. 217 1991 637 648
    • (1991) J. Mol. Biol. , vol.217 , pp. 637-648
    • Krupp, G.1    Kahle, D.2    Vogt, T.3    Char, S.4
  • 24
    • 0036719292 scopus 로고    scopus 로고
    • mRNA decay in Escherichia coli comes of age
    • S.R. Kushner mRNA decay in Escherichia coli comes of age J. Bacteriol. 184 2002 4658 4665
    • (2002) J. Bacteriol. , vol.184 , pp. 4658-4665
    • Kushner, S.R.1
  • 26
  • 27
    • 0036500552 scopus 로고    scopus 로고
    • RNA quality control: degradation of defective transfer RNA
    • Z. Li, S. Reimers, S. Pandit, and M.P. Deutscher RNA quality control: degradation of defective transfer RNA EMBO J. 21 2002 1132 1138
    • (2002) EMBO J. , vol.21 , pp. 1132-1138
    • Li, Z.1    Reimers, S.2    Pandit, S.3    Deutscher, M.P.4
  • 28
    • 0029760875 scopus 로고    scopus 로고
    • A DEAD-box-family protein is required for nucleocytoplasmic transport of yeast mRNA
    • S. Liang, M. Hitomi, Y.H. Hu, Y. Liu, and A.M. Tartakoff A DEAD-box-family protein is required for nucleocytoplasmic transport of yeast mRNA Mol. Cell. Biol. 16 1996 5139 5146
    • (1996) Mol. Cell. Biol. , vol.16 , pp. 5139-5146
    • Liang, S.1    Hitomi, M.2    Hu, Y.H.3    Liu, Y.4    Tartakoff, A.M.5
  • 29
    • 0030702085 scopus 로고    scopus 로고
    • The exosome; a conserved eukaryotic RNA processing complex containing multiple 3′→5′ exoribonuclease activities
    • P. Mitchell, E. Petfalski, A. Shevchenko, M. Mann, and D. Tollervey The exosome; a conserved eukaryotic RNA processing complex containing multiple 3′→5′ exoribonuclease activities Cell 91 1997 457 466
    • (1997) Cell , vol.91 , pp. 457-466
    • Mitchell, P.1    Petfalski, E.2    Shevchenko, A.3    Mann, M.4    Tollervey, D.5
  • 31
    • 0036050882 scopus 로고    scopus 로고
    • Polyadenylation of Escherichia coli transcripts plays an integral role in regulating intracellular levels of polynucleotide phosphorylase and RNase E
    • B.K. Mohanty, and S.R. Kushner Polyadenylation of Escherichia coli transcripts plays an integral role in regulating intracellular levels of polynucleotide phosphorylase and RNase E Mol. Microbiol. 45 2002 1315 1324
    • (2002) Mol. Microbiol. , vol.45 , pp. 1315-1324
    • Mohanty, B.K.1    Kushner, S.R.2
  • 32
    • 0032828715 scopus 로고    scopus 로고
    • A generic protein purification method for protein complex characterization and proteome exploration
    • G. Rigaut, A. Shevchenko, B. Rutz, M. Wilm, M. Mann, and B. Seraphin A generic protein purification method for protein complex characterization and proteome exploration Nat. Biotechnol. 17 1999 1030 1032
    • (1999) Nat. Biotechnol. , vol.17 , pp. 1030-1032
    • Rigaut, G.1    Shevchenko, A.2    Rutz, B.3    Wilm, M.4    Mann, M.5    Seraphin, B.6
  • 33
    • 0037205292 scopus 로고    scopus 로고
    • Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA
    • S. Saitoh, A. Chabes, W.H. McDonald, L. Thelander, J.R. Yates, and P. Russell Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA Cell 109 2002 563 573
    • (2002) Cell , vol.109 , pp. 563-573
    • Saitoh, S.1    Chabes, A.2    McDonald, W.H.3    Thelander, L.4    Yates, J.R.5    Russell, P.6
  • 34
    • 0024825036 scopus 로고
    • A yeast nucleolar protein related to mammalian fibrillarin is associated with small nucleolar RNA and is essential for viability
    • T. Schimmang, D. Tollervey, H. Kern, R. Frank, and E.C. Hurt A yeast nucleolar protein related to mammalian fibrillarin is associated with small nucleolar RNA and is essential for viability EMBO J. 8 1989 4015 4024
    • (1989) EMBO J. , vol.8 , pp. 4015-4024
    • Schimmang, T.1    Tollervey, D.2    Kern, H.3    Frank, R.4    Hurt, E.C.5
  • 35
    • 53249145476 scopus 로고    scopus 로고
    • Peptide sequencing by mass spectrometry for homology searches and cloning of genes
    • A. Shevchenko, M. Wilm, and M. Mann Peptide sequencing by mass spectrometry for homology searches and cloning of genes J. Protein Chem. 16 1997 481 490
    • (1997) J. Protein Chem. , vol.16 , pp. 481-490
    • Shevchenko, A.1    Wilm, M.2    Mann, M.3
  • 36
    • 0023661309 scopus 로고
    • A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA
    • D. Tollervey A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA EMBO J. 6 1987 4169 4175
    • (1987) EMBO J. , vol.6 , pp. 4169-4175
    • Tollervey, D.1
  • 37
    • 0035983990 scopus 로고    scopus 로고
    • Processing of 3′ extended read-through transcripts by the exosome can generate functional mRNAs
    • C. Torchet, C. Bousquet-Antonelli, L. Milligan, E. Thompson, J. Kufel, and D. Tollervey Processing of 3′ extended read-through transcripts by the exosome can generate functional mRNAs Mol. Cell 9 2002 1285 1296
    • (2002) Mol. Cell , vol.9 , pp. 1285-1296
    • Torchet, C.1    Bousquet-Antonelli, C.2    Milligan, L.3    Thompson, E.4    Kufel, J.5    Tollervey, D.6
  • 38
    • 0033981301 scopus 로고    scopus 로고
    • Yeast exosome mutants accumulate 3′-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs
    • A. van Hoof, P. Lennertz, and R. Parker Yeast exosome mutants accumulate 3′-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs Mol. Cell. Biol. 20 2000 441 452
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 441-452
    • Van Hoof, A.1    Lennertz, P.2    Parker, R.3
  • 39
    • 0034003545 scopus 로고    scopus 로고
    • Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated
    • S.W. Wang, T. Toda, R. MacCallum, A.L. Harris, and C. Norbury Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated Mol. Cell. Biol. 20 2000 3234 3244
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 3234-3244
    • Wang, S.W.1    Toda, T.2    MacCallum, R.3    Harris, A.L.4    Norbury, C.5
  • 40
    • 0037136552 scopus 로고    scopus 로고
    • A regulatory cytoplasmic poly(A) polymerase in Caenorhabditis elegans
    • L. Wang, C.R. Eckmann, L.C. Kadyk, M. Wickens, and J. Kimble A regulatory cytoplasmic poly(A) polymerase in Caenorhabditis elegans Nature 419 2002 312 316
    • (2002) Nature , vol.419 , pp. 312-316
    • Wang, L.1    Eckmann, C.R.2    Kadyk, L.C.3    Wickens, M.4    Kimble, J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.